RNA–Protein interactions for RNA: ENST00000358971.7

SEPSECS-201, Transcript of Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase, humanhuman

TSL 1 (best)

Gene SEPSECS, Length 3,344 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPSECS-201ENST00000358971 PPP4CP60510 307 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 ZACNQ401N2 412 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 SPDYE2Q495Y8 402 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 COMMD7Q86VX2 200 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 UBE2J2Q8N2K1 259 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 MINDY1Q8N5J2 469 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 NCLNQ969V3 563 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 RHNO1Q9BSD3 238 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 WACQ9BTA9 647 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 SPATA9Q9BWV2 254 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 FAM83DQ9H4H8 585 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 IFT46Q9NQC8 304 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 STAP1Q9ULZ2 295 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 INVSQ9Y283 1065 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 DAGLAQ9Y4D2 1042 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 PCDHGB2Q9Y5G2 931 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 COL24A1Q17RW2 1714 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 LINC00862A6NCI5 91 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 CLDN24A6NM45 220 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 DSCR3O14972 297 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 RGS10O43665 173 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 RECQL5O94762 991 aaPredicted RBP11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 HOXD4P09016 255 aaPredicted RBP11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 CYP19A1P11511 503 aaPredicted RBP11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 FCGRTP55899 365 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 POU4F3Q15319 338 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 LEXMQ3ZCV2 418 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 SH3PXD2AQ5TCZ1 1133 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 FAM219BQ5XKK7 198 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 SULT1C3Q6IMI6 304 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 CDKL3Q8IVW4 592 aaPredicted RBP11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 WDTC1Q8N5D0 677 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 PAPD5Q8NDF8 572 aaKnown RBP11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 ARNTL2Q8WYA1 636 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 NSMCE2Q96MF7 247 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 CAMKK2Q96RR4 588 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 PEBP4Q96S96 227 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 SDHCQ99643 169 aaPredicted RBP11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 KCNS3Q9BQ31 491 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 CCDC32Q9BV29 185 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 CYP4F12Q9HCS2 524 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 NGRNQ9NPE2 291 aaKnown RBP11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 ACOT13Q9NPJ3 140 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 USP22Q9UPT9 525 aa11.3□□□□□ -0.6
SEPSECS-201ENST00000358971 SCN4AP35499 1836 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 A0A0B4J203 849 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 BBIP1A8MTZ0 92 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 PPM1BO75688 479 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 UGT2B17O75795 530 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 CDK14O94921 469 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 CD19P15391 556 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 ZNF30P17039 623 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 PRKACGP22612 351 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 GADD45AP24522 165 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 UGT2B15P54855 530 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 OLR1P78380 273 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 TNK1Q13470 666 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 USP10Q14694 798 aaKnown RBP11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 RPS6KA2Q15349 733 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 FIP1L1Q6UN15 594 aaKnown RBP11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 LIPIQ6XZB0 460 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 RPS27LQ71UM5 84 aaKnown RBP11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 TAGAPQ8N103 731 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 PYCR2Q96C36 320 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 MAGEB10Q96LZ2 347 aaPredicted RBP11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 ZNF578Q96N58 590 aaPredicted RBP11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 SLC30A2Q9BRI3 323 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 WDR11Q9BZH6 1224 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 ADGRE2Q9UHX3 823 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 UPK1AO00322 258 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 PRPSAP2O60256 369 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 KPNA6O60684 536 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 TGFB3P10600 412 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 CAPN3P20807 821 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 CHRNB3Q05901 458 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 SCRN3Q0VDG4 424 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 FADDQ13158 208 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 NFYCQ13952 458 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 IRF3Q14653 427 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 ZBTB37Q5TC79 503 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 SETD6Q8TBK2 473 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 DNAJA4Q8WW22 397 aaPredicted RBP11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 SLC38A4Q969I6 547 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 VPS39Q96JC1 886 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 Q96MT0 163 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 FRMD6Q96NE9 622 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 SEC22CQ9BRL7 303 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 SLC6A17Q9H1V8 727 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 POMKQ9H5K3 350 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 RNF167Q9H6Y7 350 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 C3orf18Q9UK00 162 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 NUP98P52948 1817 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 A0A0U1RQS6 177 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 NEMP2A6NFY4 417 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 FXYD1O00168 92 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 BCKDKO14874 412 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 NCAM2O15394 837 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 FAM20BO75063 409 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 IFNA14P01570 189 aa11.29□□□□□ -0.6
SEPSECS-201ENST00000358971 TNNC2P02585 160 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms