RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 FAM35AQ86V20 835 aa10.55□□□□□ -0.72
CAPN3-205ENST00000357568 FAM72BQ86X60 149 aa10.55□□□□□ -0.72
CAPN3-205ENST00000357568 SPATA6LQ8N4H0 392 aa10.55□□□□□ -0.72
CAPN3-205ENST00000357568 SVOPQ8N4V2 548 aa10.55□□□□□ -0.72
CAPN3-205ENST00000357568 HERC2P3Q9BVR0 1158 aa10.55□□□□□ -0.72
CAPN3-205ENST00000357568 GORASP2Q9H8Y8 452 aa10.55□□□□□ -0.72
CAPN3-205ENST00000357568 IL1RL2Q9HB29 575 aa10.55□□□□□ -0.72
CAPN3-205ENST00000357568 STARD7Q9NQZ5 370 aa10.55□□□□□ -0.72
CAPN3-205ENST00000357568 POLG2Q9UHN1 485 aa10.55□□□□□ -0.72
CAPN3-205ENST00000357568 ERVW-1Q9UQF0 538 aa10.55□□□□□ -0.72
CAPN3-205ENST00000357568 PCDHGA8Q9Y5G5 932 aa10.55□□□□□ -0.72
CAPN3-205ENST00000357568 ARNTLO00327 626 aa10.55□□□□□ -0.72
CAPN3-205ENST00000357568 SLC1A7O00341 560 aa10.55□□□□□ -0.72
CAPN3-205ENST00000357568 SLC7A4O43246 635 aa10.55□□□□□ -0.72
CAPN3-205ENST00000357568 NDUFB5O43674 189 aa10.55□□□□□ -0.72
CAPN3-205ENST00000357568 CD4P01730 458 aa10.55□□□□□ -0.72
CAPN3-205ENST00000357568 NPR3P17342 541 aa10.55□□□□□ -0.72
CAPN3-205ENST00000357568 JUNDP17535 347 aa10.55□□□□□ -0.72
CAPN3-205ENST00000357568 WARSP23381 471 aaKnown RBP10.55□□□□□ -0.72
CAPN3-205ENST00000357568 EIF2DP41214 584 aaKnown RBP10.55□□□□□ -0.72
CAPN3-205ENST00000357568 ZFP36L2P47974 494 aaKnown RBP10.55□□□□□ -0.72
CAPN3-205ENST00000357568 SH3BP2P78314 561 aa10.55□□□□□ -0.72
CAPN3-205ENST00000357568 CHRNB3Q05901 458 aa10.55□□□□□ -0.72
CAPN3-205ENST00000357568 RBM20Q5T481 1227 aaKnown RBP10.55□□□□□ -0.72
CAPN3-205ENST00000357568 SYT6Q5T7P8 510 aaPredicted RBP10.55□□□□□ -0.72
CAPN3-205ENST00000357568 ZNF691Q5VV52 312 aa10.55□□□□□ -0.72
CAPN3-205ENST00000357568 C9orf57Q5W0N0 161 aa10.55□□□□□ -0.72
CAPN3-205ENST00000357568 NECAB2Q7Z6G3 386 aa10.55□□□□□ -0.72
CAPN3-205ENST00000357568 UBE2Q1Q7Z7E8 422 aa10.55□□□□□ -0.72
CAPN3-205ENST00000357568 CLEC4FQ8N1N0 589 aa10.55□□□□□ -0.72
CAPN3-205ENST00000357568 SLC2A14Q8TDB8 520 aa10.55□□□□□ -0.72
CAPN3-205ENST00000357568 FAR1Q8WVX9 515 aa10.55□□□□□ -0.72
CAPN3-205ENST00000357568 CLIP3Q96DZ5 547 aa10.55□□□□□ -0.72
CAPN3-205ENST00000357568 REXO5Q96IC2 774 aaKnown RBP10.55□□□□□ -0.72
CAPN3-205ENST00000357568 ZNF300Q96RE9 604 aaPredicted RBP10.55□□□□□ -0.72
CAPN3-205ENST00000357568 TRIT1Q9H3H1 467 aaKnown RBP10.55□□□□□ -0.72
CAPN3-205ENST00000357568 SOX17Q9H6I2 414 aaPredicted RBP10.55□□□□□ -0.72
CAPN3-205ENST00000357568 C3orf18Q9UK00 162 aa10.55□□□□□ -0.72
CAPN3-205ENST00000357568 ILVBLA1L0T0 632 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 FAM172BPA6NC97 362 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 ASPDHA6ND91 283 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 TTC34A8MYJ7 566 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 B4GAT1O43505 415 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 DYRK3O43781 588 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 UPK1BO75841 260 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 PARNO95453 639 aaKnown RBP10.54□□□□□ -0.72
CAPN3-205ENST00000357568 RPLP2P05387 115 aaKnown RBP10.54□□□□□ -0.72
CAPN3-205ENST00000357568 HGFP14210 728 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 IL1RNP18510 177 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 TPTEP56180 551 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 ISL1P61371 349 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 TUBA1BP68363 451 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 PITX1P78337 314 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-205ENST00000357568 POU6F1Q14863 301 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 ATAD3BQ5T9A4 648 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 GLYATQ6IB77 296 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 RANBP10Q6VN20 620 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 TUBA1AQ71U36 451 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 ADCK1Q86TW2 530 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 LRRC49Q8IUZ0 686 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 KIAA2013Q8IYS2 634 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 SMG8Q8ND04 991 aaKnown RBP10.54□□□□□ -0.72
CAPN3-205ENST00000357568 SETD9Q8NE22 299 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 PHF21BQ96EK2 531 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 RNF145Q96MT1 663 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 FICDQ9BVA6 458 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 BTBD2Q9BX70 525 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 C1QTNF3Q9BXJ4 246 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 UBQLN1Q9UMX0 589 aaKnown RBP10.54□□□□□ -0.72
CAPN3-205ENST00000357568 A0A087WZ62 844 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 ATP6AP2A0A1C7CYW4 349 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 CCDC154A6NI56 674 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 G3V2T6 193 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 ARVCFO00192 962 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 PIRO00625 290 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 GABRDO14764 452 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 ATP6AP2O75787 350 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 NADKO95544 446 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-205ENST00000357568 CYBBP04839 570 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 GGT1P19440 569 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 UGT2B10P36537 528 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 PGGT1BP53609 377 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 MAPK10P53779 464 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 CD47Q08722 323 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 GRB7Q14451 532 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 XKR7Q5GH72 579 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 CHCHD4Q8N4Q1 142 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 NETO2Q8NC67 525 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 OR8J3Q8NGG0 315 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 RORBQ92753 470 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 TBC1D20Q96BZ9 403 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 TUBGCP3Q96CW5 907 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 ZNF486Q96H40 463 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-205ENST00000357568 FDXACB1Q9BRP7 624 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-205ENST00000357568 MFSD1Q9H3U5 465 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 TFB2MQ9H5Q4 396 aaKnown RBP10.54□□□□□ -0.72
CAPN3-205ENST00000357568 MAGIXQ9H6Y5 334 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 CCNB1IP1Q9NPC3 277 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 TMPRSS4Q9NRS4 437 aa10.54□□□□□ -0.72
CAPN3-205ENST00000357568 SACM1LQ9NTJ5 587 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms