RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 CHAF1BQ13112 559 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 MAMLD1Q13495 774 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 PSRC1Q6PGN9 363 aaPredicted RBP11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 NIPA1Q7RTP0 329 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 C9orf43Q8TAL5 461 aaPredicted RBP11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 HIST1H2AAQ96QV6 131 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 CIB1Q99828 191 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 RIOX1Q9H6W3 641 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 ANKRA2Q9H9E1 313 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 NUP50Q9UKX7 468 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 ROBO3Q96MS0 1386 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 AZIN1O14977 448 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 PAPSS1O43252 624 aaPredicted RBP11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 ZNF132P52740 706 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 AP2S1P53680 142 aaPredicted RBP11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 VLDLRP98155 873 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 PPP3CAQ08209 521 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 E2F2Q14209 437 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 PTPRNQ16849 979 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 CPTPQ5TA50 214 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 PLPP4Q5VZY2 271 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 BEND5Q7L4P6 421 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 DNAJB8Q8NHS0 232 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 SLC33A1O00400 549 aaPredicted RBP11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 NELFEP18615 380 aaKnown RBP11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 MC4RP32245 332 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 ADCYAP1R1P41586 468 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 ADGRD1Q6QNK2 874 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 SMARCD3Q6STE5 483 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 PURBQ96QR8 312 aaKnown RBP11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 NPAS2Q99743 824 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 ADAMDEC1O15204 470 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 PGRP06401 933 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 FSHRP23945 695 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 PEX2P28328 305 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 OR2B6P58173 313 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 CHST15Q7LFX5 561 aaPredicted RBP11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 UNC5BQ8IZJ1 945 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 SEMA3CQ99985 751 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 CHIAQ9BZP6 476 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 ZNF490Q9ULM2 529 aaPredicted RBP11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 ATP6AP2A0A1C7CYW4 349 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 EPHB6O15197 1021 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 ATP6AP2O75787 350 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 TGFB3P10600 412 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 IGFBP5P24593 272 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 DDX6P26196 483 aaKnown RBP eCLIP11.41□□□□□ -0.582e-6■■■□□ 17.1
SPTBN1-202ENST00000356805 PSMD8P48556 350 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 PITPNAQ00169 270 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 MINDY4Q4G0A6 757 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 UBE2R2Q712K3 238 aaPredicted RBP11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 CADM1Q9BY67 442 aaKnown RBP11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 DNAJC11Q9NVH1 559 aa11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 RGS17Q9UGC6 210 aaPredicted RBP11.41□□□□□ -0.58
SPTBN1-202ENST00000356805 MYPNQ86TC9 1320 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 MECP2P51608 486 aaKnown RBP11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 PTPN20Q4JDL3 420 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 C6orf52Q5T4I8 152 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 GPR180Q86V85 440 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 PHF13Q86YI8 300 aaPredicted RBP11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 TMC8Q8IU68 726 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 COPS7AQ9UBW8 275 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 F8VP50 259 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 FGBP02675 491 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 ITPKAP23677 461 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 S100A2P29034 98 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 EPHA3P29320 983 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 LRRC55Q6ZSA7 311 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 ILDR1Q86SU0 546 aaPredicted RBP11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 C10orf107Q8IVU9 208 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 LPPQ93052 612 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 MND1Q9BWT6 205 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 TMLHEQ9NVH6 421 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 ILVBLA1L0T0 632 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 CCDC85CA6NKD9 419 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 UGT1A9O60656 530 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 TRBC1P01850 177 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 UGT1A6P19224 532 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 UGT1A1P22309 533 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 UGT1A4P22310 534 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 UGT1A3P35503 534 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 ZNF143P52747 638 aaPredicted RBP11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 PTP4A2Q12974 167 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 MPP2Q14168 576 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 ZNF697Q5TEC3 545 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 SDHAF4Q5VUM1 108 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 ALG1LQ6GMV1 187 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 KLHL35Q6PF15 583 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 RHOJQ9H4E5 214 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 UGT1A7Q9HAW7 530 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 UGT1A10Q9HAW8 530 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 UGT1A8Q9HAW9 530 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 KCNE2Q9Y6J6 123 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 RIIAD1A6NNX1 92 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 CLDN5O00501 218 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 SCELO95171 688 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 GSTT2BP0CG30 244 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 SLC9A3P48764 834 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 SEC13P55735 322 aa11.4□□□□□ -0.58
SPTBN1-202ENST00000356805 LARS2Q15031 903 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms