RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 TCF25Q9BQ70 676 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 C14orf105Q9NVL8 296 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 KIF20BQ96Q89 1820 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 A0A1B0GVM2 712 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 OR14I1A6ND48 311 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 TCAF2A6NFQ2 919 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 CAPN14A8MX76 684 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 MEIS2O14770 477 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 RNASEH2AO75792 299 aaKnown RBP6.41□□□□□ -1.38
UPF2-201ENST00000356352 KRT36O76013 467 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 CDK14O94921 469 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 C1RP00736 705 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 ANXA4P09525 319 aaPredicted RBP6.41□□□□□ -1.38
UPF2-201ENST00000356352 NR2C1P13056 603 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 ZNF823P16415 610 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 DRD4P21917 467 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 GRK6P43250 576 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 CCR10P46092 362 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 LCP2Q13094 533 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 GTF2H2Q13888 395 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 FAM189A2Q15884 450 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 PERM1Q5SV97 790 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 GTF2H2CQ6P1K8 395 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 SCIMPQ6UWF3 145 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 FRRS1Q6ZNA5 592 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 KCNK18Q7Z418 384 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 PLCZ1Q86YW0 608 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 CADM2Q8N3J6 435 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 GLB1L3Q8NCI6 653 aaPredicted RBP6.41□□□□□ -1.38
UPF2-201ENST00000356352 PNPT1Q8TCS8 783 aaKnown RBP6.41□□□□□ -1.38
UPF2-201ENST00000356352 AGAP11Q8TF27 550 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 SMG7Q92540 1137 aaKnown RBP6.41□□□□□ -1.38
UPF2-201ENST00000356352 KAZALD1Q96I82 304 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 EXOC2Q96KP1 924 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 APOLD1Q96LR9 279 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 GPATCH1Q9BRR8 931 aaKnown RBP6.41□□□□□ -1.38
UPF2-201ENST00000356352 TNKS2Q9H2K2 1166 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 FAM83DQ9H4H8 585 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 FARSBQ9NSD9 589 aaKnown RBP6.41□□□□□ -1.38
UPF2-201ENST00000356352 PLLPQ9Y342 182 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 BCL9O00512 1426 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 LRRIQ1Q96JM4 1722 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 WASHC1A8K0Z3 465 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 VSTM5A8MXK1 200 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 TISP43B9A030 160 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 WASH3PC4AMC7 463 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 H0YJX3 145 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 PITPNM1O00562 1244 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 ZMPSTE24O75844 475 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 SCGNO76038 276 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 RASGRP1O95267 797 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 CCNE2O96020 404 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 SRPRAP08240 638 aaKnown RBP6.41□□□□□ -1.38
UPF2-201ENST00000356352 CYP4B1P13584 511 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 DDX6P26196 483 aaKnown RBP eCLIP6.41□□□□□ -1.38
UPF2-201ENST00000356352 ADRA1BP35368 520 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 SP2Q02086 613 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 SCRN3Q0VDG4 424 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 AADACL2Q6P093 401 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 WASH2PQ6VEQ5 465 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 DEFB132Q7Z7B7 95 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 XYLT1Q86Y38 959 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 PGAM4Q8N0Y7 254 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 ARL10Q8N8L6 244 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 SLAIN1Q8ND83 568 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 SLC9A6Q92581 669 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 FCGR1BQ92637 280 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 DNAJC19Q96DA6 116 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 C11orf24Q96F05 449 aaPredicted RBP6.41□□□□□ -1.38
UPF2-201ENST00000356352 SLC25A51Q9H1U9 297 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 SLC28A3Q9HAS3 691 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 EQTNQ9NQ60 294 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 DUS2Q9NX74 493 aaKnown RBP6.41□□□□□ -1.38
UPF2-201ENST00000356352 ZNF282Q9UDV7 671 aaPredicted RBP6.41□□□□□ -1.38
UPF2-201ENST00000356352 CDH7Q9ULB5 785 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 USP20Q9Y2K6 914 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 HES2Q9Y543 173 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 PEX16Q9Y5Y5 336 aa6.41□□□□□ -1.38
UPF2-201ENST00000356352 IQGAP1P46940 1657 aa6.4□□□□□ -1.38
UPF2-201ENST00000356352 CLDN5O00501 218 aa6.4□□□□□ -1.38
UPF2-201ENST00000356352 ENTPD5O75356 428 aa6.4□□□□□ -1.38
UPF2-201ENST00000356352 TRIM3O75382 744 aaPredicted RBP6.4□□□□□ -1.38
UPF2-201ENST00000356352 CAPN15O75808 1086 aa6.4□□□□□ -1.38
UPF2-201ENST00000356352 ZNF432O94892 652 aa6.4□□□□□ -1.38
UPF2-201ENST00000356352 AP2A1O95782 977 aa6.4□□□□□ -1.38
UPF2-201ENST00000356352 AGR2O95994 175 aa6.4□□□□□ -1.38
UPF2-201ENST00000356352 RENP00797 406 aa6.4□□□□□ -1.38
UPF2-201ENST00000356352 PGRP06401 933 aa6.4□□□□□ -1.38
UPF2-201ENST00000356352 CD2P06729 351 aa6.4□□□□□ -1.38
UPF2-201ENST00000356352 PTPN2P17706 415 aa6.4□□□□□ -1.38
UPF2-201ENST00000356352 HNRNPH3P31942 346 aaKnown RBP6.4□□□□□ -1.38
UPF2-201ENST00000356352 CCKBRP32239 447 aa6.4□□□□□ -1.38
UPF2-201ENST00000356352 PRMT2P55345 433 aa6.4□□□□□ -1.38
UPF2-201ENST00000356352 TAF10Q12962 218 aa6.4□□□□□ -1.38
UPF2-201ENST00000356352 RFTN1Q14699 578 aaPredicted RBP6.4□□□□□ -1.38
UPF2-201ENST00000356352 DPY19L1Q2PZI1 675 aa6.4□□□□□ -1.38
UPF2-201ENST00000356352 KLHL22Q53GT1 634 aa6.4□□□□□ -1.38
UPF2-201ENST00000356352 PAMR1Q6UXH9 720 aa6.4□□□□□ -1.38
UPF2-201ENST00000356352 ALYREFQ86V81 257 aaKnown RBP6.4□□□□□ -1.38
UPF2-201ENST00000356352 MPP5Q8N3R9 675 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms