RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 KRT36O76013 467 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 ADAMTSL2Q86TH1 951 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 TMEM156Q8N614 296 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 OR10Q1Q8NGQ4 319 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 SRMSQ9H3Y6 488 aa17.12■□□□□ 0.33
COL27A1-201ENST00000356083 PECAM1P16284 738 aaPredicted RBP17.11■□□□□ 0.33
COL27A1-201ENST00000356083 PLA2G16P53816 162 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 MOB2Q70IA6 237 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 OR8H3Q8N146 312 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 ERGIC2Q96RQ1 377 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 AP3M1Q9Y2T2 418 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 COL6A1P12109 1028 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 TUBG1P23258 451 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 CHST9Q7L1S5 443 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 YIPF4Q9BSR8 244 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 TRIP11Q15643 1979 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 ASTN2O75129 1339 aaPredicted RBP17.11■□□□□ 0.33
COL27A1-201ENST00000356083 PAPSS1O43252 624 aaPredicted RBP17.11■□□□□ 0.33
COL27A1-201ENST00000356083 KDM4BO94953 1096 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 MTHFD1P11586 935 aaKnown RBP17.11■□□□□ 0.33
COL27A1-201ENST00000356083 ARSHQ5FYA8 562 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 ZC3H10Q96K80 434 aaKnown RBP17.11■□□□□ 0.33
COL27A1-201ENST00000356083 MECRQ9BV79 373 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 RDH8Q9NYR8 311 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 MAP3K4Q9Y6R4 1608 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 CSTBP04080 98 aaKnown RBP17.11■□□□□ 0.33
COL27A1-201ENST00000356083 GJB1P08034 283 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 THRBP10828 461 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 EPHA3P29320 983 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 SELENOVP59797 346 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 ST3GAL4Q11206 333 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 VGLL4Q14135 290 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 SLAIN1Q8ND83 568 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 ZFP3Q96NJ6 502 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 HBEGFQ99075 208 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 MALT1Q9UDY8 824 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 PDCD5O14737 125 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 MAP3K8P41279 467 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 SCGB2B2Q4G0G5 96 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 PLCZ1Q86YW0 608 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 INO80EQ8NBZ0 244 aaPredicted RBP17.11■□□□□ 0.33
COL27A1-201ENST00000356083 GORASP1Q9BQQ3 440 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 TCF7L1Q9HCS4 588 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 FKBP7Q9Y680 259 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 AK5Q9Y6K8 562 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 LGALS2P05162 132 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 GZMAP12544 262 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 CORO1AP31146 461 aaKnown RBP17.11■□□□□ 0.33
COL27A1-201ENST00000356083 CDK7P50613 346 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 PRR5P85299 388 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 MTX3Q5HYI7 312 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 C4orf19Q8IY42 314 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 ZNF101Q8IZC7 436 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 SDR16C5Q8N3Y7 309 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 OR2L2Q8NH16 312 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 GPR151Q8TDV0 419 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 MRPL45Q9BRJ2 306 aaKnown RBP17.11■□□□□ 0.33
COL27A1-201ENST00000356083 MED28Q9H204 178 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 ADAM28Q9UKQ2 775 aa17.11■□□□□ 0.33
COL27A1-201ENST00000356083 MRPS17Q9Y2R5 130 aaKnown RBP17.11■□□□□ 0.33
COL27A1-201ENST00000356083 FAM237BA0A1B0GVD1 139 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 PGLSO95336 258 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 SLC35G6P0C7Q6 338 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 AGXTP21549 392 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 ZNF135P52742 658 aaPredicted RBP17.1■□□□□ 0.33
COL27A1-201ENST00000356083 GPALPP1Q8IXQ4 340 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 MCFD2Q8NI22 146 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 MDFIC2A0A1B0GVS7 189 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 KBTBD8Q8NFY9 601 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 NDRG1Q92597 394 aaKnown RBP17.1■□□□□ 0.33
COL27A1-201ENST00000356083 CHCHD6Q9BRQ6 235 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 HBS1LQ9Y450 684 aaKnown RBP17.1■□□□□ 0.33
COL27A1-201ENST00000356083 BRWD1Q9NSI6 2320 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 DRD4P21917 467 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 MOXD1Q6UVY6 613 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 TBL1XR1Q9BZK7 514 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 DHRS12A0PJE2 317 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 DDTLA6NHG4 134 aaPredicted RBP17.1■□□□□ 0.33
COL27A1-201ENST00000356083 MSI1O43347 362 aaKnown RBP17.1■□□□□ 0.33
COL27A1-201ENST00000356083 ATF4P18848 351 aaPredicted RBP17.1■□□□□ 0.33
COL27A1-201ENST00000356083 NR4A1P22736 598 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 ACVR2AP27037 513 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 MCL1Q07820 350 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 UNC5BQ8IZJ1 945 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 PIK3C3Q8NEB9 887 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 GRHL3Q8TE85 626 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 ZNF570Q96NI8 536 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 TRMT61BQ9BVS5 477 aaKnown RBP17.1■□□□□ 0.33
COL27A1-201ENST00000356083 CLTCQ00610 1675 aaKnown RBP17.1■□□□□ 0.33
COL27A1-201ENST00000356083 BICRAQ9NZM4 1560 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 A0A0G2JN53 185 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 KCNJ13O60928 360 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 IDSP22304 550 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 VARSP26640 1264 aaKnown RBP17.1■□□□□ 0.33
COL27A1-201ENST00000356083 NFKB2Q00653 900 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 INAVAQ3KP66 663 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 ZNF792Q3KQV3 632 aa17.1■□□□□ 0.33
COL27A1-201ENST00000356083 LDB1Q86U70 411 aaPredicted RBP17.1■□□□□ 0.33
COL27A1-201ENST00000356083 PNLDC1Q8NA58 520 aaKnown RBP17.1■□□□□ 0.33
COL27A1-201ENST00000356083 FAM46DQ8NEK8 389 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms