RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 SLC6A19Q695T7 634 aa11.04□□□□□ -0.64
RTN3-204ENST00000354497 FAM92BQ6ZTR7 304 aa11.04□□□□□ -0.64
RTN3-204ENST00000354497 USP45Q70EL2 814 aa11.04□□□□□ -0.64
RTN3-204ENST00000354497 Q8NA96 180 aa11.04□□□□□ -0.64
RTN3-204ENST00000354497 CCHCR1Q8TD31 782 aa11.04□□□□□ -0.64
RTN3-204ENST00000354497 SEC14L1Q92503 715 aa11.04□□□□□ -0.64
RTN3-204ENST00000354497 P3H4Q92791 437 aa11.04□□□□□ -0.64
RTN3-204ENST00000354497 AGAP2Q99490 1192 aa11.04□□□□□ -0.64
RTN3-204ENST00000354497 HERPUD2Q9BSE4 406 aa11.04□□□□□ -0.64
RTN3-204ENST00000354497 BRD8Q9H0E9 1235 aa11.04□□□□□ -0.64
RTN3-204ENST00000354497 OSGEPL1Q9H4B0 414 aa11.04□□□□□ -0.64
RTN3-204ENST00000354497 RWDD2AQ9UIY3 292 aa11.04□□□□□ -0.64
RTN3-204ENST00000354497 PHTF1Q9UMS5 762 aa11.04□□□□□ -0.64
RTN3-204ENST00000354497 PCYT1BQ9Y5K3 369 aaPredicted RBP11.04□□□□□ -0.64
RTN3-204ENST00000354497 MRFAP1Q9Y605 127 aa11.04□□□□□ -0.64
RTN3-204ENST00000354497 CENPEQ02224 2701 aa11.04□□□□□ -0.64
RTN3-204ENST00000354497 CELSR2Q9HCU4 2923 aa11.04□□□□□ -0.64
RTN3-204ENST00000354497 ABCA12Q86UK0 2595 aa11.04□□□□□ -0.64
RTN3-204ENST00000354497 KIR2DS5A0A0G2JLQ3 304 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 A0A0G2JNG1 304 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 LILRA5A6NI73 299 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 KIR2DS3K7RE56 304 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 ZNF185O15231 689 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 ZSCAN12O43309 604 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 SOCS5O75159 536 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 UBXN7O94888 489 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 TIAF1O95411 115 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 RECKO95980 971 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 FGF5P12034 268 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 F3P13726 295 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 PRF1P14222 555 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 PTPN4P29074 926 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 PTGIRP43119 386 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 NSFP46459 744 aaKnown RBP11.03□□□□□ -0.64
RTN3-204ENST00000354497 DPTQ07507 201 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 IL10RBQ08334 325 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 SLC10A7Q0GE19 358 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 TRAF2Q12933 501 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 RAPSNQ13702 412 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 KIR2DS5Q14953 304 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 MAN2A1Q16706 1144 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 ZRANB3Q5FWF4 1079 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 KLHDC7AQ5VTJ3 777 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 CACHD1Q5VU97 1274 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 LRRC66Q68CR7 880 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 IRGCQ6NXR0 463 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 TECPR1Q7Z6L1 1165 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 LUZP1Q86V48 1076 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 LAPTM4BQ86VI4 370 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 ZC3H18Q86VM9 953 aaKnown RBP11.03□□□□□ -0.64
RTN3-204ENST00000354497 PHYKPLQ8IUZ5 450 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 RHOT1Q8IXI2 618 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 SLC34A3Q8N130 599 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 KCTD12Q96CX2 325 aaKnown RBP11.03□□□□□ -0.64
RTN3-204ENST00000354497 MCEEQ96PE7 176 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 RIOK2Q9BVS4 552 aaKnown RBP11.03□□□□□ -0.64
RTN3-204ENST00000354497 DHX35Q9H5Z1 703 aaKnown RBP11.03□□□□□ -0.64
RTN3-204ENST00000354497 PDE7BQ9NP56 450 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 ADAM22Q9P0K1 906 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 GMEB1Q9Y692 573 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 FBN2P35556 2912 aa11.03□□□□□ -0.64
RTN3-204ENST00000354497 ANKUB1A6NFN9 424 aa11.02□□□□□ -0.64
RTN3-204ENST00000354497 F5H423 210 aaPredicted RBP11.02□□□□□ -0.64
RTN3-204ENST00000354497 C3orf80F5H4A9 247 aa11.02□□□□□ -0.64
RTN3-204ENST00000354497 F8VZ95 297 aa11.02□□□□□ -0.64
RTN3-204ENST00000354497 HNRNPRO43390 633 aaKnown RBP11.02□□□□□ -0.64
RTN3-204ENST00000354497 HTRA2O43464 458 aaPredicted RBP11.02□□□□□ -0.64
RTN3-204ENST00000354497 VIPP01282 170 aa11.02□□□□□ -0.64
RTN3-204ENST00000354497 C9P02748 559 aa11.02□□□□□ -0.64
RTN3-204ENST00000354497 CYP1A1P04798 512 aaPredicted RBP11.02□□□□□ -0.64
RTN3-204ENST00000354497 DESP17661 470 aa11.02□□□□□ -0.64
RTN3-204ENST00000354497 ZNF165P49910 485 aa11.02□□□□□ -0.64
RTN3-204ENST00000354497 PDE1BQ01064 536 aa11.02□□□□□ -0.64
RTN3-204ENST00000354497 FMO1Q01740 532 aa11.02□□□□□ -0.64
RTN3-204ENST00000354497 CDR2Q01850 454 aa11.02□□□□□ -0.64
RTN3-204ENST00000354497 ACTN3Q08043 901 aaPredicted RBP11.02□□□□□ -0.64
RTN3-204ENST00000354497 TUBB3Q13509 450 aa11.02□□□□□ -0.64
RTN3-204ENST00000354497 LAMB3Q13751 1172 aa11.02□□□□□ -0.64
RTN3-204ENST00000354497 SNCBQ16143 134 aa11.02□□□□□ -0.64
RTN3-204ENST00000354497 SEPT7Q16181 437 aaKnown RBP11.02□□□□□ -0.64
RTN3-204ENST00000354497 DBN1Q16643 649 aa11.02□□□□□ -0.64
RTN3-204ENST00000354497 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.02□□□□□ -0.64
RTN3-204ENST00000354497 HSP90AA4PQ58FG1 418 aa11.02□□□□□ -0.64
RTN3-204ENST00000354497 ARMC12Q5T9G4 340 aa11.02□□□□□ -0.64
RTN3-204ENST00000354497 WDR93Q6P2C0 686 aa11.02□□□□□ -0.64
RTN3-204ENST00000354497 DNAJC24Q6P3W2 148 aa11.02□□□□□ -0.64
RTN3-204ENST00000354497 CYB5D1Q6P9G0 228 aa11.02□□□□□ -0.64
RTN3-204ENST00000354497 SYVN1Q86TM6 617 aa11.02□□□□□ -0.64
RTN3-204ENST00000354497 ZNF677Q86XU0 584 aa11.02□□□□□ -0.64
RTN3-204ENST00000354497 ARHGAP12Q8IWW6 846 aa11.02□□□□□ -0.64
RTN3-204ENST00000354497 IQCKQ8N0W5 287 aa11.02□□□□□ -0.64
RTN3-204ENST00000354497 CBARPQ8N350 705 aaPredicted RBP11.02□□□□□ -0.64
RTN3-204ENST00000354497 TTC30BQ8N4P2 665 aa11.02□□□□□ -0.64
RTN3-204ENST00000354497 CISD2Q8N5K1 135 aaKnown RBP11.02□□□□□ -0.64
RTN3-204ENST00000354497 GBP7Q8N8V2 638 aaPredicted RBP11.02□□□□□ -0.64
RTN3-204ENST00000354497 AVL9Q8NBF6 648 aa11.02□□□□□ -0.64
RTN3-204ENST00000354497 FDCSPQ8NFU4 85 aa11.02□□□□□ -0.64
RTN3-204ENST00000354497 TRIM58Q8NG06 486 aa11.02□□□□□ -0.64
RTN3-204ENST00000354497 EXD1Q8NHP7 514 aa11.02□□□□□ -0.64
RTN3-204ENST00000354497 PNPLA2Q96AD5 504 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms