RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 SLC28A2O43868 658 aa14.75□□□□□ -0.05
COL17A1-201ENST00000353479 SH3GL2Q99962 352 aa14.75□□□□□ -0.05
COL17A1-201ENST00000353479 TMEM245Q9H330 911 aa14.75□□□□□ -0.05
COL17A1-201ENST00000353479 PDLIM7Q9NR12 457 aa14.75□□□□□ -0.05
COL17A1-201ENST00000353479 A0A0D9SEW6 157 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 PTGESO14684 152 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 NIPSNAP2O75323 286 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 NUP107P57740 925 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 IRF9Q00978 393 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 CST9Q5W186 159 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 GLIS1Q8NBF1 620 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 C7orf26Q96N11 449 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 GATA5Q9BWX5 397 aaPredicted RBP14.74□□□□□ -0.05
COL17A1-201ENST00000353479 COPG1Q9Y678 874 aaKnown RBP14.74□□□□□ -0.05
COL17A1-201ENST00000353479 RBM47A0AV96 593 aaKnown RBP14.74□□□□□ -0.05
COL17A1-201ENST00000353479 NRP2O60462 931 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 SIN3BO75182 1162 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 CLDN7O95471 211 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 BIKQ13323 160 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 IRF5Q13568 498 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 ADRM1Q16186 407 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 USP39Q53GS9 565 aaKnown RBP14.74□□□□□ -0.05
COL17A1-201ENST00000353479 IL23RQ5VWK5 629 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 ENPP7Q6UWV6 458 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 EQTNQ9NQ60 294 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 ZDHHC18Q9NUE0 388 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 BUD31P41223 144 aaPredicted RBP14.74□□□□□ -0.05
COL17A1-201ENST00000353479 CLK3P49761 638 aaKnown RBP14.74□□□□□ -0.05
COL17A1-201ENST00000353479 C2orf80Q0P641 193 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 KLF10Q13118 480 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 CHRNA6Q15825 494 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 GPR33Q49SQ1 333 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 RNF44Q7L0R7 432 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 PHC3Q8NDX5 983 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 RAD51AP1Q96B01 352 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 OSBPL6Q9BZF3 934 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 NMUR2Q9GZQ4 415 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 SRMSQ9H3Y6 488 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 C3orf14Q9HBI5 128 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 SLC2A6Q9UGQ3 507 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 UROSP10746 265 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 ACP5P13686 325 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 POLR2JP52435 117 aaKnown RBP14.74□□□□□ -0.05
COL17A1-201ENST00000353479 BNIP2Q12982 314 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 LAPTM5Q13571 262 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 KCNJ11Q14654 390 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 C22orf39Q6P5X5 142 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 RMND5BQ96G75 393 aaPredicted RBP14.74□□□□□ -0.05
COL17A1-201ENST00000353479 SLC38A3Q99624 504 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 ARL8BQ9NVJ2 186 aa14.74□□□□□ -0.05
COL17A1-201ENST00000353479 PTGES3LE9PB15 166 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 CAPN1P07384 714 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 ANXA4P09525 319 aaPredicted RBP14.73□□□□□ -0.05
COL17A1-201ENST00000353479 HLA-EP13747 358 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 WNT7BP56706 349 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 PITX1P78337 314 aaPredicted RBP14.73□□□□□ -0.05
COL17A1-201ENST00000353479 IRGCQ6NXR0 463 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 LUZP2Q86TE4 346 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 ZNF781Q8N8C0 355 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 PNPT1Q8TCS8 783 aaKnown RBP14.73□□□□□ -0.05
COL17A1-201ENST00000353479 KXD1Q9BQD3 176 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 CARS2Q9HA77 564 aaKnown RBP14.73□□□□□ -0.05
COL17A1-201ENST00000353479 ANKRD66B4E2M5 251 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 SLC6A2P23975 617 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 STX4Q12846 297 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 ZNF605Q86T29 641 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 FAM20CQ8IXL6 584 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 DCAF4L2Q8NA75 395 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 POMGNT2Q8NAT1 580 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 CNTN6Q9UQ52 1028 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 TEX28O15482 410 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 PROZP22891 400 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 KIR3DL1P43629 444 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 ZNF572Q7Z3I7 529 aaPredicted RBP14.73□□□□□ -0.05
COL17A1-201ENST00000353479 WDTC1Q8N5D0 677 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 SLCO2A1Q92959 643 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 BRINP2Q9C0B6 783 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 DNAJC28Q9NX36 388 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 FBXL12Q9NXK8 326 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 ZDHHC3Q9NYG2 299 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 GTPBP1O00178 669 aaKnown RBP14.73□□□□□ -0.05
COL17A1-201ENST00000353479 VIPR1P32241 457 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 ACTR1BP42025 376 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 IDH2P48735 452 aaKnown RBP14.73□□□□□ -0.05
COL17A1-201ENST00000353479 ACTR1AP61163 376 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 TNK2Q07912 1038 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 ATP13A5Q4VNC0 1218 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 PITRM1Q5JRX3 1037 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 ZNF544Q6NX49 715 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 PAQR3Q6TCH7 311 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 SPESP1Q6UW49 350 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 C15orf39Q6ZRI6 1047 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 CPSF7Q8N684 471 aaKnown RBP14.73□□□□□ -0.05
COL17A1-201ENST00000353479 BANPQ8N9N5 519 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 CHURC1-FNTBB4DL54 471 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 PRAMEF11O60813 436 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 CREB1P16220 341 aa14.73□□□□□ -0.05
COL17A1-201ENST00000353479 FEN1P39748 380 aaKnown RBP14.73□□□□□ -0.05
COL17A1-201ENST00000353479 EXOSC8Q96B26 276 aaKnown RBP14.73□□□□□ -0.05
COL17A1-201ENST00000353479 REXO5Q96IC2 774 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms