RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 KIF19Q2TAC6 998 aa16.49■□□□□ 0.23
SAMM50-201ENST00000350028 ZDHHC20Q5W0Z9 365 aa16.49■□□□□ 0.23
SAMM50-201ENST00000350028 OGFOD2Q6N063 350 aa16.49■□□□□ 0.23
SAMM50-201ENST00000350028 ELMSAN1Q6PJG2 1045 aa16.49■□□□□ 0.23
SAMM50-201ENST00000350028 GPRIN3Q6ZVF9 776 aa16.49■□□□□ 0.23
SAMM50-201ENST00000350028 TSPAN33Q86UF1 283 aa16.49■□□□□ 0.23
SAMM50-201ENST00000350028 MIER2Q8N344 545 aa16.49■□□□□ 0.23
SAMM50-201ENST00000350028 HIPK4Q8NE63 616 aa16.49■□□□□ 0.23
SAMM50-201ENST00000350028 RIN3Q8TB24 985 aa16.49■□□□□ 0.23
SAMM50-201ENST00000350028 PHOSPHO2Q8TCD6 241 aa16.49■□□□□ 0.23
SAMM50-201ENST00000350028 BADQ92934 168 aa16.49■□□□□ 0.23
SAMM50-201ENST00000350028 ASIC4Q96FT7 647 aa16.49■□□□□ 0.23
SAMM50-201ENST00000350028 PLEKHG4BQ96PX9 1271 aa16.49■□□□□ 0.23
SAMM50-201ENST00000350028 ZNF382Q96SR6 550 aa16.49■□□□□ 0.23
SAMM50-201ENST00000350028 ZNF184Q99676 751 aaPredicted RBP16.49■□□□□ 0.23
SAMM50-201ENST00000350028 C17orf80Q9BSJ5 609 aa16.49■□□□□ 0.23
SAMM50-201ENST00000350028 FAM126AQ9BYI3 521 aaPredicted RBP16.49■□□□□ 0.23
SAMM50-201ENST00000350028 VCX3BQ9H321 246 aa16.49■□□□□ 0.23
SAMM50-201ENST00000350028 LATS2Q9NRM7 1088 aa16.49■□□□□ 0.23
SAMM50-201ENST00000350028 POLG2Q9UHN1 485 aa16.49■□□□□ 0.23
SAMM50-201ENST00000350028 ZMYM5Q9UJ78 669 aa16.49■□□□□ 0.23
SAMM50-201ENST00000350028 LRCH1Q9Y2L9 728 aa16.49■□□□□ 0.23
SAMM50-201ENST00000350028 PCDHGA7Q9Y5G6 932 aa16.49■□□□□ 0.23
SAMM50-201ENST00000350028 PRSS21Q9Y6M0 314 aa16.49■□□□□ 0.23
SAMM50-201ENST00000350028 XYLBO75191 536 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 RFPL2O75678 378 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 MATN4O95460 622 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 TCF3P15923 654 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 XRCC1P18887 633 aaPredicted RBP16.48■□□□□ 0.23
SAMM50-201ENST00000350028 MRPL19P49406 292 aaKnown RBP16.48■□□□□ 0.23
SAMM50-201ENST00000350028 GRIK2Q13002 908 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 FLOT2Q14254 428 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 GRB7Q14451 532 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 EML3Q32P44 896 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 FBXO48Q5FWF7 155 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 TRIM68Q6AZZ1 485 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 ZFP1Q6P2D0 407 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 PSRC1Q6PGN9 363 aaPredicted RBP16.48■□□□□ 0.23
SAMM50-201ENST00000350028 PAOXQ6QHF9 649 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 SBSNQ6UWP8 590 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 DPY19L3Q6ZPD9 716 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 FUNDC1Q8IVP5 155 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 ZBTB2Q8N680 514 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 PCYOX1LQ8NBM8 494 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 GPR26Q8NDV2 337 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 MICAL1Q8TDZ2 1067 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 OTUB2Q96DC9 234 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 ZDHHC6Q9H6R6 413 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 ZDHHC3Q9NYG2 299 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 ADA2Q9NZK5 511 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 KLHL42Q9P2K6 505 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 EIF2B4Q9UI10 523 aaKnown RBP16.48■□□□□ 0.23
SAMM50-201ENST00000350028 CROTQ9UKG9 612 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 PACSIN3Q9UKS6 424 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 BTRCQ9Y297 605 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 NDUFAF1Q9Y375 327 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 SLC4A7Q9Y6M7 1214 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 A0A1B0GTL3 188 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 A8MX80 341 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 WASH3PC4AMC7 463 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 BNIP3LO60238 219 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 BCAS2O75934 225 aaPredicted RBP16.48■□□□□ 0.23
SAMM50-201ENST00000350028 TRIM16O95361 564 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 PRR35P0CG20 571 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 CHRM1P11229 460 aaPredicted RBP16.48■□□□□ 0.23
SAMM50-201ENST00000350028 HGFP14210 728 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 TYRP14679 529 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 IDO1P14902 403 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 NSG1P42857 185 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 POLR2LP62875 67 aaKnown RBP16.48■□□□□ 0.23
SAMM50-201ENST00000350028 ZNF77Q15935 545 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 TTLL9Q3SXZ7 439 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 GPRC6AQ5T6X5 926 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 LRRC66Q68CR7 880 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 KIAA0907Q7Z7F0 614 aaPredicted RBP16.48■□□□□ 0.23
SAMM50-201ENST00000350028 CHCHD4Q8N4Q1 142 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 PDPRQ8NCN5 879 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 LKAAEAR1Q8TD35 194 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 DLG3Q92796 817 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 ULK4Q96C45 1275 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 ROPN1LQ96C74 230 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 CCDC97Q96F63 343 aaPredicted RBP16.48■□□□□ 0.23
SAMM50-201ENST00000350028 SLC2A11Q9BYW1 496 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 SPATS2LQ9NUQ6 558 aaKnown RBP16.48■□□□□ 0.23
SAMM50-201ENST00000350028 SLCO3A1Q9UIG8 710 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 ZNF225Q9UK10 706 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 PSMD13Q9UNM6 376 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 OARD1Q9Y530 152 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 TIMM22Q9Y584 194 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 PTGDR2Q9Y5Y4 395 aa16.48■□□□□ 0.23
SAMM50-201ENST00000350028 BPTFQ12830 3046 aa16.47■□□□□ 0.23
SAMM50-201ENST00000350028 H3BNX3 289 aa16.47■□□□□ 0.23
SAMM50-201ENST00000350028 FFAR2O15552 330 aa16.47■□□□□ 0.23
SAMM50-201ENST00000350028 CSPG5O95196 566 aa16.47■□□□□ 0.23
SAMM50-201ENST00000350028 BMP1P13497 986 aa16.47■□□□□ 0.23
SAMM50-201ENST00000350028 ITGB6P18564 788 aa16.47■□□□□ 0.23
SAMM50-201ENST00000350028 PRDX3P30048 256 aaKnown RBP16.47■□□□□ 0.23
SAMM50-201ENST00000350028 RECQLP46063 649 aaPredicted RBP16.47■□□□□ 0.23
SAMM50-201ENST00000350028 PTSQ03393 145 aa16.47■□□□□ 0.23
SAMM50-201ENST00000350028 RPS6KA2Q15349 733 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms