RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 E2F2Q14209 437 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 PCID2Q5JVF3 399 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 TTC23Q5W5X9 447 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 BLOC1S3Q6QNY0 202 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 LYSMD2Q8IV50 215 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 HS3ST5Q8IZT8 346 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 CLYBLQ8N0X4 340 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 TUBGCP3Q96CW5 907 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 TEX37Q96LM6 180 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 KCNA7Q96RP8 456 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 BTBD2Q9BX70 525 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 ATXN3LQ9H3M9 355 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 ALG9Q9H6U8 611 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 SP140LQ9H930 580 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 MRM3Q9HC36 420 aaKnown RBP18.48■□□□□ 0.55
SCARF1-202ENST00000348987 TBC1D14Q9P2M4 693 aa18.48■□□□□ 0.55
SCARF1-202ENST00000348987 TBC1D4O60343 1298 aa18.47■□□□□ 0.55
SCARF1-202ENST00000348987 SOAT2O75908 522 aa18.47■□□□□ 0.55
SCARF1-202ENST00000348987 CDH1P12830 882 aa18.47■□□□□ 0.55
SCARF1-202ENST00000348987 OR4D2P58180 307 aa18.47■□□□□ 0.55
SCARF1-202ENST00000348987 GABARAPL2P60520 117 aa18.47■□□□□ 0.55
SCARF1-202ENST00000348987 POU4F1Q01851 419 aa18.47■□□□□ 0.55
SCARF1-202ENST00000348987 ZNF678Q5SXM1 525 aa18.47■□□□□ 0.55
SCARF1-202ENST00000348987 TAC4Q86UU9 113 aa18.47■□□□□ 0.55
SCARF1-202ENST00000348987 POC5Q8NA72 575 aa18.47■□□□□ 0.55
SCARF1-202ENST00000348987 RHOXF1Q8NHV9 184 aa18.47■□□□□ 0.55
SCARF1-202ENST00000348987 FAR1Q8WVX9 515 aa18.47■□□□□ 0.55
SCARF1-202ENST00000348987 AURKBQ96GD4 344 aaPredicted RBP18.47■□□□□ 0.55
SCARF1-202ENST00000348987 MBOAT4Q96T53 435 aa18.47■□□□□ 0.55
SCARF1-202ENST00000348987 MIR1-1HGQ9H1L0 117 aa18.47■□□□□ 0.55
SCARF1-202ENST00000348987 MUC13Q9H3R2 512 aa18.47■□□□□ 0.55
SCARF1-202ENST00000348987 MARCH7Q9H992 704 aa18.47■□□□□ 0.55
SCARF1-202ENST00000348987 CNGB3Q9NQW8 809 aa18.47■□□□□ 0.55
SCARF1-202ENST00000348987 SDR39U1Q9NRG7 319 aaPredicted RBP18.47■□□□□ 0.55
SCARF1-202ENST00000348987 ASPDHA6ND91 283 aa18.47■□□□□ 0.55
SCARF1-202ENST00000348987 DFFAO00273 331 aa18.47■□□□□ 0.55
SCARF1-202ENST00000348987 SLC1A7O00341 560 aa18.47■□□□□ 0.55
SCARF1-202ENST00000348987 NCAM2O15394 837 aa18.47■□□□□ 0.55
SCARF1-202ENST00000348987 DYRK3O43781 588 aa18.47■□□□□ 0.55
SCARF1-202ENST00000348987 XPNPEP2O43895 674 aa18.47■□□□□ 0.55
SCARF1-202ENST00000348987 GSNP06396 782 aa18.47■□□□□ 0.55
SCARF1-202ENST00000348987 LTA4HP09960 611 aaKnown RBP18.47■□□□□ 0.55
SCARF1-202ENST00000348987 SPNP16150 400 aa18.47■□□□□ 0.55
SCARF1-202ENST00000348987 TGFBR1P36897 503 aa18.47■□□□□ 0.55
SCARF1-202ENST00000348987 RAB41Q5JT25 222 aa18.47■□□□□ 0.55
SCARF1-202ENST00000348987 GLYATQ6IB77 296 aa18.47■□□□□ 0.55
SCARF1-202ENST00000348987 PHYKPLQ8IUZ5 450 aa18.47■□□□□ 0.55
SCARF1-202ENST00000348987 DYNC2LI1Q8TCX1 351 aa18.47■□□□□ 0.55
SCARF1-202ENST00000348987 EXT2Q93063 718 aa18.47■□□□□ 0.55
SCARF1-202ENST00000348987 SMOC2Q9H3U7 446 aa18.47■□□□□ 0.55
SCARF1-202ENST00000348987 CASTOR2A6NHX0 329 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 UBXN8O00124 270 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 AP3B1O00203 1094 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 LINC00032P0C843 101 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 CXCR2P25025 360 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 FOXM1Q08050 763 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 PCBP1Q15365 356 aaKnown RBP eCLIP18.46■□□□□ 0.55
SCARF1-202ENST00000348987 CRY1Q16526 586 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 UNC50Q53HI1 259 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 LRRC49Q8IUZ0 686 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 SLC22A9Q8IVM8 553 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 ZNF555Q8NEP9 628 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 IPMKQ8NFU5 416 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 TWIST2Q8WVJ9 160 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 DSN1Q9H410 356 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 NDFIP2Q9NV92 336 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 INTS7Q9NVH2 962 aaKnown RBP18.46■□□□□ 0.55
SCARF1-202ENST00000348987 FBXO5Q9UKT4 447 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 TRHDEQ9UKU6 1024 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 PNMA8BQ9ULN7 279 aaPredicted RBP18.46■□□□□ 0.55
SCARF1-202ENST00000348987 BTRCQ9Y297 605 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 G3V2T6 193 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 TBX1O43435 398 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 RBP1P09455 135 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 EIF2DP41214 584 aaKnown RBP18.46■□□□□ 0.55
SCARF1-202ENST00000348987 MTHFRP42898 656 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 HCAR3P49019 387 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 CXCR3P49682 368 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 PSEN2P49810 448 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 TSPY1Q01534 308 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 PPP1R8Q12972 351 aaKnown RBP18.46■□□□□ 0.55
SCARF1-202ENST00000348987 DGCR6Q14129 220 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 SPRYD7Q5W111 196 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 RALGPS2Q86X27 583 aaPredicted RBP18.46■□□□□ 0.55
SCARF1-202ENST00000348987 ZDHHC13Q8IUH4 622 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 C2CD4AQ8NCU7 369 aaPredicted RBP18.46■□□□□ 0.55
SCARF1-202ENST00000348987 NSMCE2Q96MF7 247 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 C17orf80Q9BSJ5 609 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 MID1IP1Q9NPA3 183 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 NECTIN3Q9NQS3 549 aa18.46■□□□□ 0.55
SCARF1-202ENST00000348987 A0A1W2PP18 115 aa18.45■□□□□ 0.54
SCARF1-202ENST00000348987 UPK1BO75841 260 aa18.45■□□□□ 0.54
SCARF1-202ENST00000348987 MATN4O95460 622 aa18.45■□□□□ 0.54
SCARF1-202ENST00000348987 CHRNB1P11230 501 aa18.45■□□□□ 0.54
SCARF1-202ENST00000348987 PGFP49763 221 aa18.45■□□□□ 0.54
SCARF1-202ENST00000348987 VAC14Q08AM6 782 aa18.45■□□□□ 0.54
SCARF1-202ENST00000348987 KCNAB2Q13303 367 aa18.45■□□□□ 0.54
SCARF1-202ENST00000348987 HEATR4Q86WZ0 1026 aa18.45■□□□□ 0.54
SCARF1-202ENST00000348987 OR7G1Q8NGA0 311 aa18.45■□□□□ 0.54
SCARF1-202ENST00000348987 PHF10Q8WUB8 498 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms