RNA–Protein interactions for RNA: ENST00000348286.6

DNMT3B-203, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,048 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-203ENST00000348286 RHDQ02161 417 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 HERC3Q15034 1050 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 ZNF678Q5SXM1 525 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 GALNT5Q7Z7M9 940 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 ROPN1LQ96C74 230 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 PADI4Q9UM07 663 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 OR2AG2A6NM03 316 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 ANKRD66B4E2M5 251 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 ESR1P03372 595 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 GKP32189 559 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 MTHFRP42898 656 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 RPS9P46781 194 aaKnown RBP12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 CACNG1Q06432 222 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 FIBCD1Q8N539 461 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 OR9Q1Q8NGQ5 310 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 DMTF1Q9Y222 760 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 CDK14O94921 469 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 S1PR4O95977 384 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 FESP07332 822 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 KCNA5P22460 613 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 GLDCP23378 1020 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 PTGER3P43115 390 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 STC1P52823 247 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 NOGQ13253 232 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 CCDC85BQ15834 202 aaPredicted RBP12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 ADGRF1Q5T601 910 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 NPAS4Q8IUM7 802 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 C8orf48Q96LL4 319 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 LIN28AQ9H9Z2 209 aaKnown RBP12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 SLC28A1O00337 649 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 RGS5O15539 181 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 MTX2O75431 263 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 IL1BP01584 269 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 ALOX15P16050 662 aaPredicted RBP12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 S100A5P33763 92 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 HNF4AP41235 474 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 CRATP43155 626 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 C21orf59P57076 290 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 DEFB115Q30KQ5 88 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 CERS6Q6ZMG9 384 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 TMEM248Q9NWD8 314 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 C3orf18Q9UK00 162 aa12.97□□□□□ -0.33
DNMT3B-203ENST00000348286 TRAV19A0A0A6YYK7 116 aa12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 NEDD8-MDP1E9PL57 170 aa12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 H3BSA7 217 aa12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 SLC22A2O15244 555 aa12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 ZNF37AP17032 561 aaPredicted RBP12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 POLR2EP19388 210 aaKnown RBP12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 GSK3BP49841 420 aa12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 C1QTNF8P60827 252 aa12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 SLC44A4Q53GD3 710 aa12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 SETMARQ53H47 684 aaPredicted RBP12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 ZNF697Q5TEC3 545 aa12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 ELMSAN1Q6PJG2 1045 aa12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 SLC2A7Q6PXP3 512 aa12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 UMODL1-AS1Q8N2C9 162 aa12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 OR10Q1Q8NGQ4 319 aa12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 REEP1Q9H902 201 aa12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 INTS10Q9NVR2 710 aaKnown RBP12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 SMPD3Q9NY59 655 aaPredicted RBP12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 PCDHB1Q9Y5F3 818 aa12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 MAN1A2O60476 641 aa12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 KERAO60938 352 aa12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 ARSAP15289 507 aa12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 CSKP41240 450 aa12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 LEPRP48357 1165 aaKnown RBP12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 CYP4F8P98187 520 aa12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 SMARCB1Q12824 385 aa12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 CSTF3Q12996 717 aaKnown RBP12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 YAF2Q8IY57 180 aa12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 C2orf73Q8N5S3 287 aaPredicted RBP12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 PLEKHG4BQ96PX9 1271 aa12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 TRPC4Q9UBN4 977 aa12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 MAGEL2Q9UJ55 1249 aa12.96□□□□□ -0.33
DNMT3B-203ENST00000348286 G3V2T6 193 aa12.96□□□□□ -0.34
DNMT3B-203ENST00000348286 PPP6CO00743 305 aa12.96□□□□□ -0.34
DNMT3B-203ENST00000348286 FFAR2O15552 330 aa12.96□□□□□ -0.34
DNMT3B-203ENST00000348286 PRAMEF11O60813 436 aa12.96□□□□□ -0.34
DNMT3B-203ENST00000348286 H6PDO95479 791 aa12.96□□□□□ -0.34
DNMT3B-203ENST00000348286 TRPC1P48995 793 aa12.96□□□□□ -0.34
DNMT3B-203ENST00000348286 GPR17Q13304 367 aa12.96□□□□□ -0.34
DNMT3B-203ENST00000348286 ITGADQ13349 1161 aa12.96□□□□□ -0.34
DNMT3B-203ENST00000348286 TLR1Q15399 786 aa12.96□□□□□ -0.34
DNMT3B-203ENST00000348286 UNC50Q53HI1 259 aa12.96□□□□□ -0.34
DNMT3B-203ENST00000348286 ARHGAP12Q8IWW6 846 aa12.96□□□□□ -0.34
DNMT3B-203ENST00000348286 ZBTB2Q8N680 514 aa12.96□□□□□ -0.34
DNMT3B-203ENST00000348286 NSUN3Q9H649 340 aaKnown RBP12.96□□□□□ -0.34
DNMT3B-203ENST00000348286 ARPC2O15144 300 aa12.95□□□□□ -0.34
DNMT3B-203ENST00000348286 PCDH8O95206 1070 aa12.95□□□□□ -0.34
DNMT3B-203ENST00000348286 BROXQ5VW32 411 aa12.95□□□□□ -0.34
DNMT3B-203ENST00000348286 ALKAL1Q6UXT8 129 aa12.95□□□□□ -0.34
DNMT3B-203ENST00000348286 DNAJB7Q7Z6W7 309 aaPredicted RBP12.95□□□□□ -0.34
DNMT3B-203ENST00000348286 LIX1Q8N485 282 aa12.95□□□□□ -0.34
DNMT3B-203ENST00000348286 ASAH2Q9NR71 780 aa12.95□□□□□ -0.34
DNMT3B-203ENST00000348286 SAMHD1Q9Y3Z3 626 aaKnown RBP12.95□□□□□ -0.34
DNMT3B-203ENST00000348286 GABRB3P28472 473 aa12.95□□□□□ -0.34
DNMT3B-203ENST00000348286 MAPK8P45983 427 aa12.95□□□□□ -0.34
DNMT3B-203ENST00000348286 ACBD5Q5T8D3 534 aaPredicted RBP12.95□□□□□ -0.34
DNMT3B-203ENST00000348286 ZNF483Q8TF39 744 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms