RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 CLTBP09497 229 aa13.16□□□□□ -0.3
CASC4-202ENST00000345795 HNF1BP35680 557 aa13.16□□□□□ -0.3
CASC4-202ENST00000345795 ZNF135P52742 658 aaPredicted RBP13.16□□□□□ -0.3
CASC4-202ENST00000345795 SNRPD1P62314 119 aaKnown RBP13.16□□□□□ -0.3
CASC4-202ENST00000345795 AARS2Q5JTZ9 985 aaKnown RBP13.16□□□□□ -0.3
CASC4-202ENST00000345795 CCDC81Q6ZN84 652 aa13.16□□□□□ -0.3
CASC4-202ENST00000345795 TIFABQ6ZNK6 161 aa13.16□□□□□ -0.3
CASC4-202ENST00000345795 CHST9Q7L1S5 443 aa13.16□□□□□ -0.3
CASC4-202ENST00000345795 PQLC1Q8N2U9 271 aa13.16□□□□□ -0.3
CASC4-202ENST00000345795 KDM1BQ8NB78 822 aa13.16□□□□□ -0.3
CASC4-202ENST00000345795 PKP2Q99959 881 aa13.16□□□□□ -0.3
CASC4-202ENST00000345795 KIF13BQ9NQT8 1826 aa13.16□□□□□ -0.3
CASC4-202ENST00000345795 SLCO1B7G3V0H7 640 aa13.16□□□□□ -0.3
CASC4-202ENST00000345795 HOXD9P28356 352 aaPredicted RBP13.16□□□□□ -0.3
CASC4-202ENST00000345795 RPIAP49247 311 aa13.16□□□□□ -0.3
CASC4-202ENST00000345795 IRF8Q02556 426 aa13.16□□□□□ -0.3
CASC4-202ENST00000345795 TNK2Q07912 1038 aa13.16□□□□□ -0.3
CASC4-202ENST00000345795 TBCCQ15814 346 aa13.16□□□□□ -0.3
CASC4-202ENST00000345795 UBE2R2Q712K3 238 aaPredicted RBP13.16□□□□□ -0.3
CASC4-202ENST00000345795 TMEM159Q96B96 161 aa13.16□□□□□ -0.3
CASC4-202ENST00000345795 PGAP3Q96FM1 320 aaPredicted RBP13.16□□□□□ -0.3
CASC4-202ENST00000345795 FAM126AQ9BYI3 521 aaPredicted RBP13.16□□□□□ -0.3
CASC4-202ENST00000345795 MFSD1Q9H3U5 465 aa13.16□□□□□ -0.3
CASC4-202ENST00000345795 IGSF5Q9NSI5 407 aa13.16□□□□□ -0.3
CASC4-202ENST00000345795 ZNF490Q9ULM2 529 aaPredicted RBP13.16□□□□□ -0.3
CASC4-202ENST00000345795 RAD54BQ9Y620 910 aa13.16□□□□□ -0.3
CASC4-202ENST00000345795 KLF11O14901 512 aa13.16□□□□□ -0.3
CASC4-202ENST00000345795 C1QAP02745 245 aa13.16□□□□□ -0.3
CASC4-202ENST00000345795 PSMA4P25789 261 aaKnown RBP13.16□□□□□ -0.3
CASC4-202ENST00000345795 ARF5P84085 180 aa13.16□□□□□ -0.3
CASC4-202ENST00000345795 UNC50Q53HI1 259 aa13.16□□□□□ -0.3
CASC4-202ENST00000345795 ARHGAP15Q53QZ3 475 aa13.16□□□□□ -0.3
CASC4-202ENST00000345795 PHACTR4Q8IZ21 702 aa13.16□□□□□ -0.3
CASC4-202ENST00000345795 CHPFQ8IZ52 775 aa13.16□□□□□ -0.3
CASC4-202ENST00000345795 POF1BQ8WVV4 589 aa13.16□□□□□ -0.3
CASC4-202ENST00000345795 PSKH2Q96QS6 385 aa13.16□□□□□ -0.3
CASC4-202ENST00000345795 AP4B1Q9Y6B7 739 aa13.16□□□□□ -0.3
CASC4-202ENST00000345795 CASQ2O14958 399 aaPredicted RBP13.15□□□□□ -0.3
CASC4-202ENST00000345795 FKBP6O75344 327 aa13.15□□□□□ -0.3
CASC4-202ENST00000345795 ETV3P41162 512 aa13.15□□□□□ -0.3
CASC4-202ENST00000345795 MAPKAPK2P49137 400 aa13.15□□□□□ -0.3
CASC4-202ENST00000345795 NAE1Q13564 534 aa13.15□□□□□ -0.3
CASC4-202ENST00000345795 PDK3Q15120 406 aa13.15□□□□□ -0.3
CASC4-202ENST00000345795 TTLL9Q3SXZ7 439 aa13.15□□□□□ -0.3
CASC4-202ENST00000345795 FAM174BQ3ZCQ3 159 aa13.15□□□□□ -0.3
CASC4-202ENST00000345795 SETMARQ53H47 684 aaPredicted RBP13.15□□□□□ -0.3
CASC4-202ENST00000345795 USP45Q70EL2 814 aa13.15□□□□□ -0.3
CASC4-202ENST00000345795 RIN3Q8TB24 985 aa13.15□□□□□ -0.3
CASC4-202ENST00000345795 BADQ92934 168 aa13.15□□□□□ -0.3
CASC4-202ENST00000345795 PPP1R2P1Q96PQ5 205 aa13.15□□□□□ -0.3
CASC4-202ENST00000345795 CENPKQ9BS16 269 aa13.15□□□□□ -0.3
CASC4-202ENST00000345795 AARSD1Q9BTE6 412 aaKnown RBP13.15□□□□□ -0.3
CASC4-202ENST00000345795 TDRD1Q9BXT4 1180 aaKnown RBP13.15□□□□□ -0.3
CASC4-202ENST00000345795 RLFQ13129 1914 aa13.15□□□□□ -0.3
CASC4-202ENST00000345795 CFAP99D6REC4 459 aa13.15□□□□□ -0.3
CASC4-202ENST00000345795 H2AFYO75367 372 aaKnown RBP13.15□□□□□ -0.3
CASC4-202ENST00000345795 CHRM1P11229 460 aaPredicted RBP13.15□□□□□ -0.3
CASC4-202ENST00000345795 TYRP14679 529 aa13.15□□□□□ -0.3
CASC4-202ENST00000345795 HERVK_113P63132 956 aa13.15□□□□□ -0.3
CASC4-202ENST00000345795 VAC14Q08AM6 782 aa13.15□□□□□ -0.3
CASC4-202ENST00000345795 TGFBIQ15582 683 aa13.15□□□□□ -0.3
CASC4-202ENST00000345795 C2orf27AQ580R0 203 aa13.15□□□□□ -0.3
CASC4-202ENST00000345795 SLC39A5Q6ZMH5 540 aa13.15□□□□□ -0.3
CASC4-202ENST00000345795 JADE3Q92613 823 aa13.15□□□□□ -0.3
CASC4-202ENST00000345795 SLC39A13Q96H72 371 aa13.15□□□□□ -0.3
CASC4-202ENST00000345795 ERVK-6Q9BXR3 956 aa13.15□□□□□ -0.3
CASC4-202ENST00000345795 FAM124BQ9H5Z6 455 aaPredicted RBP13.15□□□□□ -0.3
CASC4-202ENST00000345795 GID8Q9NWU2 228 aa13.15□□□□□ -0.3
CASC4-202ENST00000345795 ZNF212Q9UDV6 495 aa13.15□□□□□ -0.3
CASC4-202ENST00000345795 LNPEPQ9UIQ6 1025 aa13.15□□□□□ -0.3
CASC4-202ENST00000345795 PLAGL1Q9UM63 463 aa13.15□□□□□ -0.3
CASC4-202ENST00000345795 SLC22A14Q9Y267 594 aa13.15□□□□□ -0.3
CASC4-202ENST00000345795 UNCXA6NJT0 531 aa13.15□□□□□ -0.31
CASC4-202ENST00000345795 UBFD1O14562 309 aaKnown RBP13.15□□□□□ -0.31
CASC4-202ENST00000345795 OR6B1O95007 311 aa13.15□□□□□ -0.31
CASC4-202ENST00000345795 SOD2P04179 222 aa13.15□□□□□ -0.31
CASC4-202ENST00000345795 EPCAMP16422 314 aa13.15□□□□□ -0.31
CASC4-202ENST00000345795 MAGEA6P43360 314 aa13.15□□□□□ -0.31
CASC4-202ENST00000345795 LCP2Q13094 533 aa13.15□□□□□ -0.31
CASC4-202ENST00000345795 CCNIQ14094 377 aa13.15□□□□□ -0.31
CASC4-202ENST00000345795 PHKG1Q16816 387 aa13.15□□□□□ -0.31
CASC4-202ENST00000345795 ZNF678Q5SXM1 525 aa13.15□□□□□ -0.31
CASC4-202ENST00000345795 SUSD1Q6UWL2 747 aa13.15□□□□□ -0.31
CASC4-202ENST00000345795 YAF2Q8IY57 180 aa13.15□□□□□ -0.31
CASC4-202ENST00000345795 LSMEM2Q8N112 164 aa13.15□□□□□ -0.31
CASC4-202ENST00000345795 MIEF2Q96C03 454 aa13.15□□□□□ -0.31
CASC4-202ENST00000345795 RNF11Q9Y3C5 154 aa13.15□□□□□ -0.31
CASC4-202ENST00000345795 HCFC2Q9Y5Z7 792 aa13.15□□□□□ -0.31
CASC4-202ENST00000345795 MYOFQ9NZM1 2061 aa13.15□□□□□ -0.31
CASC4-202ENST00000345795 LEFTY2O00292 366 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 ATXN1LP0C7T5 689 aaKnown RBP13.14□□□□□ -0.31
CASC4-202ENST00000345795 G6PDP11413 515 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 CD1DP15813 335 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 EPB42P16452 691 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 AOC1P19801 751 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 MRPS35P82673 323 aaKnown RBP13.14□□□□□ -0.31
CASC4-202ENST00000345795 ZXDBP98169 803 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 CYP27C1Q4G0S4 372 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 TTC33Q6PID6 262 aaPredicted RBP13.14□□□□□ -0.31
CASC4-202ENST00000345795 GAREM2Q75VX8 874 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms