RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 FFAR2O15552 330 aa11.68□□□□□ -0.54
SNCA-202ENST00000345009 MTX2O75431 263 aa11.68□□□□□ -0.54
SNCA-202ENST00000345009 NDUFS3O75489 264 aa11.68□□□□□ -0.54
SNCA-202ENST00000345009 AP2A2O94973 939 aa11.68□□□□□ -0.54
SNCA-202ENST00000345009 GSTM1P09488 218 aa11.68□□□□□ -0.54
SNCA-202ENST00000345009 CD59P13987 128 aa11.68□□□□□ -0.54
SNCA-202ENST00000345009 ATP1B2P14415 290 aaPredicted RBP11.68□□□□□ -0.54
SNCA-202ENST00000345009 SLC2A4P14672 509 aa11.68□□□□□ -0.54
SNCA-202ENST00000345009 ZNF7P17097 686 aaPredicted RBP11.68□□□□□ -0.54
SNCA-202ENST00000345009 CSRP1P21291 193 aaKnown RBP11.68□□□□□ -0.54
SNCA-202ENST00000345009 DUSP3P51452 185 aaPredicted RBP11.68□□□□□ -0.54
SNCA-202ENST00000345009 GSTM4Q03013 218 aa11.68□□□□□ -0.54
SNCA-202ENST00000345009 PDIA2Q13087 525 aaKnown RBP11.68□□□□□ -0.54
SNCA-202ENST00000345009 CBLBQ13191 982 aa11.68□□□□□ -0.54
SNCA-202ENST00000345009 C1orf61Q13536 156 aa11.68□□□□□ -0.54
SNCA-202ENST00000345009 RSPO4Q2I0M5 234 aaPredicted RBP11.68□□□□□ -0.54
SNCA-202ENST00000345009 SPANXN3Q5MJ09 141 aa11.68□□□□□ -0.54
SNCA-202ENST00000345009 FNBP1LQ5T0N5 605 aa11.68□□□□□ -0.54
SNCA-202ENST00000345009 NEPROQ6NW34 567 aa11.68□□□□□ -0.54
SNCA-202ENST00000345009 ZNF449Q6P9G9 518 aa11.68□□□□□ -0.54
SNCA-202ENST00000345009 TMEM220Q6QAJ8 160 aa11.68□□□□□ -0.54
SNCA-202ENST00000345009 CES3Q6UWW8 571 aa11.68□□□□□ -0.54
SNCA-202ENST00000345009 CHST15Q7LFX5 561 aaPredicted RBP11.68□□□□□ -0.54
SNCA-202ENST00000345009 AMZ2Q86W34 360 aa11.68□□□□□ -0.54
SNCA-202ENST00000345009 PALM2Q8IXS6 379 aa11.68□□□□□ -0.54
SNCA-202ENST00000345009 SLC25A45Q8N413 288 aa11.68□□□□□ -0.54
SNCA-202ENST00000345009 EID2Q8N6I1 236 aa11.68□□□□□ -0.54
SNCA-202ENST00000345009 BEND7Q8N7W2 519 aaPredicted RBP11.68□□□□□ -0.54
SNCA-202ENST00000345009 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.68□□□□□ -0.54
SNCA-202ENST00000345009 FAM46DQ8NEK8 389 aa11.68□□□□□ -0.54
SNCA-202ENST00000345009 OR4C6Q8NH72 309 aa11.68□□□□□ -0.54
SNCA-202ENST00000345009 GPBAR1Q8TDU6 330 aa11.68□□□□□ -0.54
SNCA-202ENST00000345009 PYROXD1Q8WU10 500 aa11.68□□□□□ -0.54
SNCA-202ENST00000345009 TSSK1BQ9BXA7 367 aa11.68□□□□□ -0.54
SNCA-202ENST00000345009 PHACTR1Q9C0D0 580 aa11.68□□□□□ -0.54
SNCA-202ENST00000345009 C20orf96Q9NUD7 363 aaPredicted RBP11.68□□□□□ -0.54
SNCA-202ENST00000345009 UCKL1Q9NWZ5 548 aa11.68□□□□□ -0.54
SNCA-202ENST00000345009 GRHL1Q9NZI5 618 aa11.68□□□□□ -0.54
SNCA-202ENST00000345009 FTSJ1Q9UET6 329 aa11.68□□□□□ -0.54
SNCA-202ENST00000345009 TMPRSS11EQ9UL52 423 aa11.68□□□□□ -0.54
SNCA-202ENST00000345009 FAM169AQ9Y6X4 670 aa11.68□□□□□ -0.54
SNCA-202ENST00000345009 RNF223E7ERA6 249 aa11.67□□□□□ -0.54
SNCA-202ENST00000345009 YY2O15391 372 aa11.67□□□□□ -0.54
SNCA-202ENST00000345009 SH3BP5O60239 455 aa11.67□□□□□ -0.54
SNCA-202ENST00000345009 DNAJC6O75061 913 aa11.67□□□□□ -0.54
SNCA-202ENST00000345009 LDOC1O95751 146 aaPredicted RBP11.67□□□□□ -0.54
SNCA-202ENST00000345009 OR56A5P0C7T3 313 aa11.67□□□□□ -0.54
SNCA-202ENST00000345009 ACP5P13686 325 aa11.67□□□□□ -0.54
SNCA-202ENST00000345009 CEACAM1P13688 526 aa11.67□□□□□ -0.54
SNCA-202ENST00000345009 FOXN2P32314 431 aa11.67□□□□□ -0.54
SNCA-202ENST00000345009 ELK3P41970 407 aa11.67□□□□□ -0.54
SNCA-202ENST00000345009 CTBSQ01459 385 aa11.67□□□□□ -0.54
SNCA-202ENST00000345009 BIRC2Q13490 618 aa11.67□□□□□ -0.54
SNCA-202ENST00000345009 CUL1Q13616 776 aa11.67□□□□□ -0.54
SNCA-202ENST00000345009 HLTFQ14527 1009 aaKnown RBP eCLIP11.67□□□□□ -0.54
SNCA-202ENST00000345009 PUM1Q14671 1186 aaKnown RBP eCLIP11.67□□□□□ -0.54
SNCA-202ENST00000345009 INSCQ1MX18 579 aa11.67□□□□□ -0.54
SNCA-202ENST00000345009 ZNF648Q5T619 568 aaPredicted RBP11.67□□□□□ -0.54
SNCA-202ENST00000345009 ZCCHC8Q6NZY4 707 aaKnown RBP11.67□□□□□ -0.54
SNCA-202ENST00000345009 CRTC3Q6UUV7 619 aa11.67□□□□□ -0.54
SNCA-202ENST00000345009 LRRC6Q86X45 466 aa11.67□□□□□ -0.54
SNCA-202ENST00000345009 PIANPQ8IYJ0 282 aa11.67□□□□□ -0.54
SNCA-202ENST00000345009 ZBED8Q8IZ13 594 aa11.67□□□□□ -0.54
SNCA-202ENST00000345009 RASGEF1AQ8N9B8 481 aa11.67□□□□□ -0.54
SNCA-202ENST00000345009 OR6C4Q8NGE1 309 aa11.67□□□□□ -0.54
SNCA-202ENST00000345009 GPR150Q8NGU9 434 aa11.67□□□□□ -0.54
SNCA-202ENST00000345009 FBXO25Q8TCJ0 367 aa11.67□□□□□ -0.54
SNCA-202ENST00000345009 IFT81Q8WYA0 676 aa11.67□□□□□ -0.54
SNCA-202ENST00000345009 SEC14L1Q92503 715 aa11.67□□□□□ -0.54
SNCA-202ENST00000345009 SGF29Q96ES7 293 aa11.67□□□□□ -0.54
SNCA-202ENST00000345009 TIMM29Q9BSF4 260 aa11.67□□□□□ -0.54
SNCA-202ENST00000345009 FAM167BQ9BTA0 163 aa11.67□□□□□ -0.54
SNCA-202ENST00000345009 CLPBQ9H078 707 aa11.67□□□□□ -0.54
SNCA-202ENST00000345009 TCEAL2Q9H3H9 227 aaPredicted RBP11.67□□□□□ -0.54
SNCA-202ENST00000345009 DPEP2Q9H4A9 486 aa11.67□□□□□ -0.54
SNCA-202ENST00000345009 PPANQ9NQ55 473 aaKnown RBP11.67□□□□□ -0.54
SNCA-202ENST00000345009 TEX264Q9Y6I9 313 aa11.67□□□□□ -0.54
SNCA-202ENST00000345009 ARID1BQ8NFD5 2236 aaPredicted RBP11.67□□□□□ -0.54
SNCA-202ENST00000345009 IGLV3-16A0A075B6K0 115 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 OR51F1A6NGY5 319 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 OR2AG2A6NM03 316 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 E7ESA3 106 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 GPR39O43194 453 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 ZW10O43264 779 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 POP7O75817 140 aaKnown RBP11.66□□□□□ -0.54
SNCA-202ENST00000345009 FTH1P02794 183 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 FUCA1P04066 466 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 OGNP20774 298 aaKnown RBP11.66□□□□□ -0.54
SNCA-202ENST00000345009 IDSP22304 550 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 ACTR1BP42025 376 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 ARCN1P48444 511 aaKnown RBP11.66□□□□□ -0.54
SNCA-202ENST00000345009 CDKN1CP49918 316 aaPredicted RBP11.66□□□□□ -0.54
SNCA-202ENST00000345009 CLCNKAP51800 687 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 ACTR1AP61163 376 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 DAB2P98082 770 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 CRYMQ14894 314 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 TRIP6Q15654 476 aaKnown RBP11.66□□□□□ -0.54
SNCA-202ENST00000345009 DBN1Q16643 649 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 DEFB133Q30KQ1 61 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 BCL7AQ4VC05 210 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms