RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 ARL5AQ9Y689 179 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 SMARCA4P51532 1647 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 CNTNAP1P78357 1384 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 GNG14A0A1W2PPG7 69 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 C2P06681 752 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 CHRNDQ07001 517 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 ST3GAL1Q11201 340 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 APOFQ13790 326 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 ZNF124Q15973 351 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 GPR162Q16538 588 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 SLC39A4Q6P5W5 647 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 USP30Q70CQ3 517 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 SNX20Q7Z614 316 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 NOXA1Q86UR1 476 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 SCN4BQ8IWT1 228 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 RHOT1Q8IXI2 618 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 MIER2Q8N344 545 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 ADPRHL1Q8NDY3 354 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 NGDNQ8NEJ9 315 aaKnown RBP3.73□□□□□ -1.81
SYNE2-202ENST00000344113 ITFG1Q8TB96 612 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 TBCKQ8TEA7 893 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 GPR61Q9BZJ8 451 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 SIK2Q9H0K1 926 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 WDR41Q9HAD4 459 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 CNOT8Q9UFF9 292 aaKnown RBP3.73□□□□□ -1.81
SYNE2-202ENST00000344113 KCNH4Q9UQ05 1017 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 METTL15A6NJ78 407 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 MBL2P11226 248 aaPredicted RBP3.73□□□□□ -1.81
SYNE2-202ENST00000344113 ADH6P28332 368 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 MAP4K2Q12851 820 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 ARRDC4Q8NCT1 418 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 BEST4Q8NFU0 473 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 EXT2Q93063 718 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 SORT1Q99523 831 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 KLF6Q99612 283 aaPredicted RBP3.73□□□□□ -1.81
SYNE2-202ENST00000344113 SLC13A1Q9BZW2 595 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 OR11A1Q9GZK7 315 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 FAM20BO75063 409 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 NKX3-2P78367 333 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 ROR1Q01973 937 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 CLN3Q13286 438 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 KIZQ2M2Z5 673 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 PKN3Q6P5Z2 889 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 DAW1Q8N136 415 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 MR1Q95460 341 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 HOPXQ9BPY8 73 aaPredicted RBP3.73□□□□□ -1.81
SYNE2-202ENST00000344113 TBC1D22BQ9NU19 505 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 TAS2R3Q9NYW6 316 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 HEY1Q9Y5J3 304 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 SLC7A4O43246 635 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 CA12O43570 354 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 CCNT1O60563 726 aaKnown RBP3.73□□□□□ -1.81
SYNE2-202ENST00000344113 GATBO75879 557 aaKnown RBP3.73□□□□□ -1.81
SYNE2-202ENST00000344113 FMR1Q06787 632 aaKnown RBP eCLIP3.73□□□□□ -1.81
SYNE2-202ENST00000344113 PIGHQ14442 188 aaPredicted RBP3.73□□□□□ -1.81
SYNE2-202ENST00000344113 FCN2Q15485 313 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 CYP1B1Q16678 543 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 KYAT1Q16773 422 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 IFI44LQ53G44 452 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 CARD16Q5EG05 197 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 PERM1Q5SV97 790 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 ALKBH5Q6P6C2 394 aaKnown RBP3.73□□□□□ -1.81
SYNE2-202ENST00000344113 CASP12Q6UXS9 341 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 MTSS1LQ765P7 747 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 EEPD1Q7L9B9 569 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 DDX53Q86TM3 631 aaKnown RBP3.73□□□□□ -1.81
SYNE2-202ENST00000344113 LINC00518Q8N0U6 118 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 ULK4Q96C45 1275 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 ZNF395Q9H8N7 513 aaPredicted RBP3.73□□□□□ -1.81
SYNE2-202ENST00000344113 MLH3Q9UHC1 1453 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 KRBA1A5PL33 1030 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 FOXN1O15353 648 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 PGRP06401 933 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 IL1R2P27930 398 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 CRKLP46109 303 aaKnown RBP3.73□□□□□ -1.81
SYNE2-202ENST00000344113 HIST2H3AQ71DI3 136 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 SLC7A6OSQ96CW6 309 aaPredicted RBP3.73□□□□□ -1.81
SYNE2-202ENST00000344113 RBM38Q9H0Z9 239 aaKnown RBP3.73□□□□□ -1.81
SYNE2-202ENST00000344113 ETNK2Q9NVF9 386 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 PCDHB7Q9Y5E2 793 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 A0A1B0GWJ7 208 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 CLN5O75503 358 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 YBX3P16989 372 aaKnown RBP eCLIP3.73□□□□□ -1.81
SYNE2-202ENST00000344113 GALEQ14376 348 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 TEAD4Q15561 434 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 P2RY8Q86VZ1 359 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 OR2AP1Q8NGE2 309 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 C14orf79Q96F83 325 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 FOPNLQ96NB1 174 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 MYOCQ99972 504 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 CLN6Q9NWW5 311 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 TRHDEQ9UKU6 1024 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 DDX3YO15523 660 aaKnown RBP3.73□□□□□ -1.81
SYNE2-202ENST00000344113 NUDT21O43809 227 aaKnown RBP3.73□□□□□ -1.81
SYNE2-202ENST00000344113 ZNF821O75541 412 aaPredicted RBP3.73□□□□□ -1.81
SYNE2-202ENST00000344113 LALBAP00709 142 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 ITKQ08881 620 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 FBXL6Q8N531 539 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 ZNF507Q8TCN5 953 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 VRK1Q99986 396 aaPredicted RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms