RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 ALDOAP04075 364 aaKnown RBP4.74□□□□□ -1.65
CSMD3-203ENST00000343508 BMP2P12643 396 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 BDNFP23560 247 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 TAS2R39P59534 338 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 TPRG1LQ5T0D9 272 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-203ENST00000343508 HACD2Q6Y1H2 254 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 RASSF6Q6ZTQ3 369 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 SYT11Q9BT88 431 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 NUDT4Q9NZJ9 180 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 COL20A1Q9P218 1284 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 GULP1Q9UBP9 304 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 SOCS2O14508 198 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 VILLO15195 856 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 PRKD3O94806 890 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 TGFBR2P37173 567 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 SLC1A2P43004 574 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 HLCSP50747 726 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 UGT2B15P54855 530 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 PLEKHG7Q6ZR37 379 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 CATSPERGQ6ZRH7 1159 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 AHSA2Q719I0 299 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 C11orf74Q86VG3 221 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 OR8H3Q8N146 312 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 BTN2A2Q8WVV5 523 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 SLC13A3Q8WWT9 602 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 ERMAPQ96PL5 475 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-203ENST00000343508 SLITRK2Q9H156 845 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 SLC25A51Q9H1U9 297 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 KCNN2Q9H2S1 579 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 ZIM2Q9NZV7 527 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 MAN2B2Q9Y2E5 1009 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 PCDHB7Q9Y5E2 793 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 HSPE1-MOB4S4R3N1 261 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 ARFGEF1Q9Y6D6 1849 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 ZNF536O15090 1300 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 ANKRD33BA6NCL7 494 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 BHMG1C9JSJ3 638 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-203ENST00000343508 SLC30A4O14863 429 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 SLC7A4O43246 635 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 MAPK8P45983 427 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 CDH15P55291 814 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 GAD2Q05329 585 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 GRIK2Q13002 908 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 GTF2H2Q13888 395 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 GTF2H2CQ6P1K8 395 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 ZC3HC1Q86WB0 502 aaKnown RBP4.74□□□□□ -1.65
CSMD3-203ENST00000343508 PEX5LQ8IYB4 626 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 TRAPPC12Q8WVT3 735 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 MUS81Q96NY9 551 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 NENFQ9UMX5 172 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 GIT1Q9Y2X7 761 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 STYXL1Q9Y6J8 313 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 GSAPA4D1B5 854 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 GCAP28676 217 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 ADRA1BP35368 520 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 NOVP48745 357 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 RPS7P62081 194 aaKnown RBP4.74□□□□□ -1.65
CSMD3-203ENST00000343508 STARD3Q14849 445 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 PTPRNQ16849 979 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 FBXL19Q6PCT2 694 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 SLC30A8Q8IWU4 369 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 SMG8Q8ND04 991 aaKnown RBP4.74□□□□□ -1.65
CSMD3-203ENST00000343508 OR8H1Q8NGG4 311 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 TMBIM1Q969X1 311 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 ZNF597Q96LX8 424 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 FEM1AQ9BSK4 669 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 TAS2R7Q9NYW3 318 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 ADAMTSL3P82987 1691 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 FFAR3O14843 346 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 GPR42O15529 346 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 MYL9P24844 172 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 YWHAQP27348 245 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 ELK4P28324 431 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 ETV4P43268 484 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 KIR3DL1P43629 444 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 ASMTP46597 345 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 PPP5CP53041 499 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 MBTD1Q05BQ5 628 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 TMEM53Q6P2H8 277 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 BHLHB9Q6PI77 547 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 TCAIMQ8N3R3 496 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 CLCA2Q9UQC9 943 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 CASTOR2A6NHX0 329 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 OR6C70A6NIJ9 312 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 MAGEB3O15480 346 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 PAGE1O75459 146 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 PSKH1P11801 424 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 MAGP20916 626 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 GSTM2P28161 218 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 C5orf22Q49AR2 442 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 ARMC12Q5T9G4 340 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 SH3PXD2AQ5TCZ1 1133 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 MFSD14CQ5VZR4 134 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 CEP295NLQ96MC4 621 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 FCRL5Q96RD9 977 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 NFKBIZQ9BYH8 718 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 ELP3Q9H9T3 547 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 NEK6Q9HC98 313 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 TIMM22Q9Y584 194 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms