RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 BRD9Q9H8M2 597 aa18.4■□□□□ 0.54
HOXA9-201ENST00000343483 ZBTB26Q9HCK0 441 aa18.4■□□□□ 0.54
HOXA9-201ENST00000343483 MARK1Q9P0L2 795 aa18.4■□□□□ 0.54
HOXA9-201ENST00000343483 DHRS7Q9Y394 339 aa18.4■□□□□ 0.54
HOXA9-201ENST00000343483 NOTCH4Q99466 2003 aa18.4■□□□□ 0.54
HOXA9-201ENST00000343483 TRANK1O15050 2925 aa18.4■□□□□ 0.54
HOXA9-201ENST00000343483 SNX2O60749 519 aa18.39■□□□□ 0.53
HOXA9-201ENST00000343483 CDK14O94921 469 aa18.39■□□□□ 0.53
HOXA9-201ENST00000343483 RPS3P23396 243 aaKnown RBP eCLIP18.39■□□□□ 0.53
HOXA9-201ENST00000343483 PTSQ03393 145 aa18.39■□□□□ 0.53
HOXA9-201ENST00000343483 PPP1R3AQ16821 1122 aa18.39■□□□□ 0.53
HOXA9-201ENST00000343483 PDE12Q6L8Q7 609 aaKnown RBP18.39■□□□□ 0.53
HOXA9-201ENST00000343483 GDPD4Q6W3E5 623 aa18.39■□□□□ 0.53
HOXA9-201ENST00000343483 CBARPQ8N350 705 aaPredicted RBP18.39■□□□□ 0.53
HOXA9-201ENST00000343483 CELF5Q8N6W0 485 aaKnown RBP18.39■□□□□ 0.53
HOXA9-201ENST00000343483 MCCC1Q96RQ3 725 aaPredicted RBP18.39■□□□□ 0.53
HOXA9-201ENST00000343483 DUS2Q9NX74 493 aaKnown RBP18.39■□□□□ 0.53
HOXA9-201ENST00000343483 UTP6Q9NYH9 597 aaKnown RBP18.39■□□□□ 0.53
HOXA9-201ENST00000343483 PRPF19Q9UMS4 504 aaKnown RBP18.39■□□□□ 0.53
HOXA9-201ENST00000343483 PRSS21Q9Y6M0 314 aa18.39■□□□□ 0.53
HOXA9-201ENST00000343483 XIRP2A4UGR9 3374 aa18.39■□□□□ 0.53
HOXA9-201ENST00000343483 TRBV5-4A0A0C4DH59 114 aa18.38■□□□□ 0.53
HOXA9-201ENST00000343483 TTC34A8MYJ7 566 aa18.38■□□□□ 0.53
HOXA9-201ENST00000343483 TRIM16O95361 564 aa18.38■□□□□ 0.53
HOXA9-201ENST00000343483 TCF3P15923 654 aa18.38■□□□□ 0.53
HOXA9-201ENST00000343483 DHCR24Q15392 516 aa18.38■□□□□ 0.53
HOXA9-201ENST00000343483 GPR33Q49SQ1 333 aa18.38■□□□□ 0.53
HOXA9-201ENST00000343483 TCEAL5Q5H9L2 206 aa18.38■□□□□ 0.53
HOXA9-201ENST00000343483 LYPLAL1Q5VWZ2 237 aa18.38■□□□□ 0.53
HOXA9-201ENST00000343483 ADGRG6Q86SQ4 1221 aa18.38■□□□□ 0.53
HOXA9-201ENST00000343483 CLYBLQ8N0X4 340 aa18.38■□□□□ 0.53
HOXA9-201ENST00000343483 NXPE1Q8N323 547 aa18.38■□□□□ 0.53
HOXA9-201ENST00000343483 PBXIP1Q96AQ6 731 aa18.38■□□□□ 0.53
HOXA9-201ENST00000343483 SERPINI1Q99574 410 aa18.38■□□□□ 0.53
HOXA9-201ENST00000343483 SLC2A11Q9BYW1 496 aa18.38■□□□□ 0.53
HOXA9-201ENST00000343483 SEMA4BQ9NPR2 832 aaPredicted RBP18.38■□□□□ 0.53
HOXA9-201ENST00000343483 CD274Q9NZQ7 290 aa18.38■□□□□ 0.53
HOXA9-201ENST00000343483 B4GALT6Q9UBX8 382 aa18.38■□□□□ 0.53
HOXA9-201ENST00000343483 PPIL1Q9Y3C6 166 aa18.38■□□□□ 0.53
HOXA9-201ENST00000343483 CYP17A1P05093 508 aa18.38■□□□□ 0.53
HOXA9-201ENST00000343483 NNMTP40261 264 aa18.38■□□□□ 0.53
HOXA9-201ENST00000343483 VIPR2P41587 438 aa18.38■□□□□ 0.53
HOXA9-201ENST00000343483 AGTR2P50052 363 aa18.38■□□□□ 0.53
HOXA9-201ENST00000343483 CLCQ05315 142 aa18.38■□□□□ 0.53
HOXA9-201ENST00000343483 KLC1Q07866 573 aa18.38■□□□□ 0.53
HOXA9-201ENST00000343483 ANKS6Q68DC2 871 aa18.38■□□□□ 0.53
HOXA9-201ENST00000343483 RFLNAQ6ZTI6 216 aa18.38■□□□□ 0.53
HOXA9-201ENST00000343483 DHDDSQ86SQ9 333 aa18.38■□□□□ 0.53
HOXA9-201ENST00000343483 LKAAEAR1Q8TD35 194 aa18.38■□□□□ 0.53
HOXA9-201ENST00000343483 C19orf60Q96EN9 201 aa18.38■□□□□ 0.53
HOXA9-201ENST00000343483 ABCG8Q9H221 673 aa18.38■□□□□ 0.53
HOXA9-201ENST00000343483 NKX2-4Q9H2Z4 354 aa18.38■□□□□ 0.53
HOXA9-201ENST00000343483 GEMIN8Q9NWZ8 242 aaKnown RBP18.38■□□□□ 0.53
HOXA9-201ENST00000343483 ATP6AP2A0A1C7CYW4 349 aa18.37■□□□□ 0.53
HOXA9-201ENST00000343483 ATP6AP2O75787 350 aa18.37■□□□□ 0.53
HOXA9-201ENST00000343483 SMNDC1O75940 238 aaKnown RBP eCLIP18.37■□□□□ 0.53
HOXA9-201ENST00000343483 SLC25A14O95258 325 aaPredicted RBP18.37■□□□□ 0.53
HOXA9-201ENST00000343483 ADH5P11766 374 aa18.37■□□□□ 0.53
HOXA9-201ENST00000343483 HK3P52790 923 aa18.37■□□□□ 0.53
HOXA9-201ENST00000343483 INHBCP55103 352 aa18.37■□□□□ 0.53
HOXA9-201ENST00000343483 POLR2LP62875 67 aaKnown RBP18.37■□□□□ 0.53
HOXA9-201ENST00000343483 LCP2Q13094 533 aa18.37■□□□□ 0.53
HOXA9-201ENST00000343483 IRGCQ6NXR0 463 aa18.37■□□□□ 0.53
HOXA9-201ENST00000343483 IZUMO2Q6UXV1 221 aa18.37■□□□□ 0.53
HOXA9-201ENST00000343483 BNC2Q6ZN30 1099 aaPredicted RBP18.37■□□□□ 0.53
HOXA9-201ENST00000343483 FRA10AC1Q70Z53 315 aa18.37■□□□□ 0.53
HOXA9-201ENST00000343483 KIAA0907Q7Z7F0 614 aaPredicted RBP18.37■□□□□ 0.53
HOXA9-201ENST00000343483 PELI3Q8N2H9 469 aa18.37■□□□□ 0.53
HOXA9-201ENST00000343483 MIEF2Q96C03 454 aa18.37■□□□□ 0.53
HOXA9-201ENST00000343483 RSPRY1Q96DX4 576 aa18.37■□□□□ 0.53
HOXA9-201ENST00000343483 PACSIN3Q9UKS6 424 aa18.37■□□□□ 0.53
HOXA9-201ENST00000343483 DNAJC15Q9Y5T4 150 aa18.37■□□□□ 0.53
HOXA9-201ENST00000343483 STX16-NPEPL1H3BU86 382 aa18.37■□□□□ 0.53
HOXA9-201ENST00000343483 STX16O14662 325 aa18.37■□□□□ 0.53
HOXA9-201ENST00000343483 NRIP1P48552 1158 aa18.37■□□□□ 0.53
HOXA9-201ENST00000343483 DGKGP49619 791 aa18.37■□□□□ 0.53
HOXA9-201ENST00000343483 FOXA1P55317 472 aa18.37■□□□□ 0.53
HOXA9-201ENST00000343483 MRPS35P82673 323 aaKnown RBP18.37■□□□□ 0.53
HOXA9-201ENST00000343483 TXNDC11Q6PKC3 985 aa18.37■□□□□ 0.53
HOXA9-201ENST00000343483 FRS2Q8WU20 508 aa18.37■□□□□ 0.53
HOXA9-201ENST00000343483 ESAMQ96AP7 390 aa18.37■□□□□ 0.53
HOXA9-201ENST00000343483 MRGPRX3Q96LB0 322 aa18.37■□□□□ 0.53
HOXA9-201ENST00000343483 KCNA7Q96RP8 456 aa18.37■□□□□ 0.53
HOXA9-201ENST00000343483 HEPHQ9BQS7 1158 aa18.37■□□□□ 0.53
HOXA9-201ENST00000343483 MTG2Q9H4K7 406 aa18.37■□□□□ 0.53
HOXA9-201ENST00000343483 PRRC2BQ5JSZ5 2229 aaKnown RBP18.36■□□□□ 0.53
HOXA9-201ENST00000343483 WASH3PC4AMC7 463 aa18.36■□□□□ 0.53
HOXA9-201ENST00000343483 AZIN1O14977 448 aa18.36■□□□□ 0.53
HOXA9-201ENST00000343483 UBDO15205 165 aa18.36■□□□□ 0.53
HOXA9-201ENST00000343483 KLK8O60259 260 aa18.36■□□□□ 0.53
HOXA9-201ENST00000343483 GPC4O75487 556 aa18.36■□□□□ 0.53
HOXA9-201ENST00000343483 LEFTY1O75610 366 aa18.36■□□□□ 0.53
HOXA9-201ENST00000343483 RPS17P08708 135 aaKnown RBP18.36■□□□□ 0.53
HOXA9-201ENST00000343483 POU2F2P09086 479 aa18.36■□□□□ 0.53
HOXA9-201ENST00000343483 ENO3P13929 434 aaPredicted RBP18.36■□□□□ 0.53
HOXA9-201ENST00000343483 ART3Q13508 389 aa18.36■□□□□ 0.53
HOXA9-201ENST00000343483 TGFBIQ15582 683 aa18.36■□□□□ 0.53
HOXA9-201ENST00000343483 UGT3A2Q3SY77 523 aa18.36■□□□□ 0.53
HOXA9-201ENST00000343483 ATP13A5Q4VNC0 1218 aa18.36■□□□□ 0.53
HOXA9-201ENST00000343483 CYHR1Q6ZMK1 362 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms