RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 ARL2P36404 184 aa16.8■□□□□ 0.28
CDK11B-201ENST00000340677 BST2Q10589 180 aaKnown RBP16.8■□□□□ 0.28
CDK11B-201ENST00000340677 ACOX1Q15067 660 aa16.8■□□□□ 0.28
CDK11B-201ENST00000340677 PTPRRQ15256 657 aa16.8■□□□□ 0.28
CDK11B-201ENST00000340677 KRT80Q6KB66 452 aa16.8■□□□□ 0.28
CDK11B-201ENST00000340677 C3orf33Q6P1S2 294 aa16.8■□□□□ 0.28
CDK11B-201ENST00000340677 BSNDQ8WZ55 320 aa16.8■□□□□ 0.28
CDK11B-201ENST00000340677 CPT1BQ92523 772 aa16.8■□□□□ 0.28
CDK11B-201ENST00000340677 EXOSC8Q96B26 276 aaKnown RBP16.8■□□□□ 0.28
CDK11B-201ENST00000340677 GPRC5CQ9NQ84 441 aa16.8■□□□□ 0.28
CDK11B-201ENST00000340677 ARHGAP28Q9P2N2 729 aa16.8■□□□□ 0.28
CDK11B-201ENST00000340677 RBAK-RBAKDNI3L0D1 243 aa16.79■□□□□ 0.28
CDK11B-201ENST00000340677 TNFRSF21O75509 655 aa16.79■□□□□ 0.28
CDK11B-201ENST00000340677 POP7O75817 140 aaKnown RBP16.79■□□□□ 0.28
CDK11B-201ENST00000340677 AKAP3O75969 853 aa16.79■□□□□ 0.28
CDK11B-201ENST00000340677 HOXD8P13378 290 aaPredicted RBP16.79■□□□□ 0.28
CDK11B-201ENST00000340677 ADH7P40394 386 aa16.79■□□□□ 0.28
CDK11B-201ENST00000340677 ACTR1BP42025 376 aa16.79■□□□□ 0.28
CDK11B-201ENST00000340677 ARCN1P48444 511 aaKnown RBP16.79■□□□□ 0.28
CDK11B-201ENST00000340677 HSF2Q03933 536 aa16.79■□□□□ 0.28
CDK11B-201ENST00000340677 ZNF169Q14929 603 aaPredicted RBP16.79■□□□□ 0.28
CDK11B-201ENST00000340677 SSX2Q16385 188 aa16.79■□□□□ 0.28
CDK11B-201ENST00000340677 HSDL1Q3SXM5 330 aa16.79■□□□□ 0.28
CDK11B-201ENST00000340677 KBTBD6Q86V97 674 aa16.79■□□□□ 0.28
CDK11B-201ENST00000340677 LIX1Q8N485 282 aa16.79■□□□□ 0.28
CDK11B-201ENST00000340677 OR52K1Q8NGK4 314 aa16.79■□□□□ 0.28
CDK11B-201ENST00000340677 PPTC7Q8NI37 304 aa16.79■□□□□ 0.28
CDK11B-201ENST00000340677 HEXDCQ8WVB3 486 aa16.79■□□□□ 0.28
CDK11B-201ENST00000340677 ZNF251Q9BRH9 671 aa16.79■□□□□ 0.28
CDK11B-201ENST00000340677 GTPBP2Q9BX10 602 aaKnown RBP16.79■□□□□ 0.28
CDK11B-201ENST00000340677 BRINP2Q9C0B6 783 aa16.79■□□□□ 0.28
CDK11B-201ENST00000340677 ILKAPQ9H0C8 392 aaPredicted RBP16.79■□□□□ 0.28
CDK11B-201ENST00000340677 SEMA3GQ9NS98 782 aa16.79■□□□□ 0.28
CDK11B-201ENST00000340677 DNAJC11Q9NVH1 559 aa16.79■□□□□ 0.28
CDK11B-201ENST00000340677 NXF1Q9UBU9 619 aaKnown RBP16.79■□□□□ 0.28
CDK11B-201ENST00000340677 TMPRSS11EQ9UL52 423 aa16.79■□□□□ 0.28
CDK11B-201ENST00000340677 TBX20Q9UMR3 447 aa16.79■□□□□ 0.28
CDK11B-201ENST00000340677 SF3B1O75533 1304 aaKnown RBP eCLIP16.79■□□□□ 0.283e-16■■■■■ 120.6
CDK11B-201ENST00000340677 CCNB2O95067 398 aa16.79■□□□□ 0.28
CDK11B-201ENST00000340677 LDOC1O95751 146 aaPredicted RBP16.79■□□□□ 0.28
CDK11B-201ENST00000340677 NTRK1P04629 796 aa16.79■□□□□ 0.28
CDK11B-201ENST00000340677 XRCC5P13010 732 aaKnown RBP16.79■□□□□ 0.28
CDK11B-201ENST00000340677 CHMP24386 653 aa16.79■□□□□ 0.28
CDK11B-201ENST00000340677 CRHR1P34998 444 aa16.79■□□□□ 0.28
CDK11B-201ENST00000340677 EIF2S3P41091 472 aaKnown RBP16.79■□□□□ 0.28
CDK11B-201ENST00000340677 SEC13P55735 322 aa16.79■□□□□ 0.28
CDK11B-201ENST00000340677 BMPR2Q13873 1038 aa16.79■□□□□ 0.28
CDK11B-201ENST00000340677 CYP4F22Q6NT55 531 aa16.79■□□□□ 0.28
CDK11B-201ENST00000340677 PIWIL3Q7Z3Z3 882 aaKnown RBP16.79■□□□□ 0.28
CDK11B-201ENST00000340677 PARP8Q8N3A8 854 aa16.79■□□□□ 0.28
CDK11B-201ENST00000340677 PPP1R13LQ8WUF5 828 aa16.79■□□□□ 0.28
CDK11B-201ENST00000340677 NPAS1Q99742 590 aa16.79■□□□□ 0.28
CDK11B-201ENST00000340677 NMUR2Q9GZQ4 415 aa16.79■□□□□ 0.28
CDK11B-201ENST00000340677 POLR3FQ9H1D9 316 aaPredicted RBP16.79■□□□□ 0.28
CDK11B-201ENST00000340677 CDH22Q9UJ99 828 aa16.79■□□□□ 0.28
CDK11B-201ENST00000340677 TMEM88BA6NKF7 163 aa16.78■□□□□ 0.28
CDK11B-201ENST00000340677 SLC16A4O15374 487 aa16.78■□□□□ 0.28
CDK11B-201ENST00000340677 HBP1O60381 514 aa16.78■□□□□ 0.28
CDK11B-201ENST00000340677 NBNO60934 754 aa16.78■□□□□ 0.28
CDK11B-201ENST00000340677 MAN2A2P49641 1150 aa16.78■□□□□ 0.28
CDK11B-201ENST00000340677 MAP2K6P52564 334 aa16.78■□□□□ 0.28
CDK11B-201ENST00000340677 CDH17Q12864 832 aa16.78■□□□□ 0.28
CDK11B-201ENST00000340677 DUSP28Q4G0W2 176 aa16.78■□□□□ 0.28
CDK11B-201ENST00000340677 TOR1AIP1Q5JTV8 583 aa16.78■□□□□ 0.28
CDK11B-201ENST00000340677 SOCS4Q8WXH5 440 aa16.78■□□□□ 0.28
CDK11B-201ENST00000340677 PDGFCQ9NRA1 345 aa16.78■□□□□ 0.28
CDK11B-201ENST00000340677 VSX1Q9NZR4 365 aaPredicted RBP16.78■□□□□ 0.28
CDK11B-201ENST00000340677 CTSFQ9UBX1 484 aa16.78■□□□□ 0.28
CDK11B-201ENST00000340677 PSME2Q9UL46 239 aa16.78■□□□□ 0.28
CDK11B-201ENST00000340677 PCDHB12Q9Y5F1 795 aa16.78■□□□□ 0.28
CDK11B-201ENST00000340677 IGKV6-21A0A0C4DH24 114 aa16.78■□□□□ 0.28
CDK11B-201ENST00000340677 CLDN4O14493 209 aa16.78■□□□□ 0.28
CDK11B-201ENST00000340677 BMP4P12644 408 aa16.78■□□□□ 0.28
CDK11B-201ENST00000340677 MX2P20592 715 aa16.78■□□□□ 0.28
CDK11B-201ENST00000340677 CD40LGP29965 261 aa16.78■□□□□ 0.28
CDK11B-201ENST00000340677 PIK3CBP42338 1070 aa16.78■□□□□ 0.28
CDK11B-201ENST00000340677 KCNH2Q12809 1159 aa16.78■□□□□ 0.28
CDK11B-201ENST00000340677 MARCH8Q5T0T0 291 aa16.78■□□□□ 0.28
CDK11B-201ENST00000340677 MANEALQ5VSG8 457 aa16.78■□□□□ 0.28
CDK11B-201ENST00000340677 TAB3Q8N5C8 712 aaPredicted RBP16.78■□□□□ 0.28
CDK11B-201ENST00000340677 ZSWIM2Q8NEG5 633 aa16.78■□□□□ 0.28
CDK11B-201ENST00000340677 SPACA1Q9HBV2 294 aa16.78■□□□□ 0.28
CDK11B-201ENST00000340677 ING3Q9NXR8 418 aa16.78■□□□□ 0.28
CDK11B-201ENST00000340677 GAB2Q9UQC2 676 aa16.78■□□□□ 0.28
CDK11B-201ENST00000340677 RUVBL1Q9Y265 456 aaKnown RBP16.78■□□□□ 0.28
CDK11B-201ENST00000340677 COL1A2P08123 1366 aa16.78■□□□□ 0.28
CDK11B-201ENST00000340677 ALDH1A1P00352 501 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 IGHV2-70P01814 119 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 TMBIM6P55061 237 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 MMRN1Q13201 1228 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 SLC18A3Q16572 532 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 IER5Q5VY09 327 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 BHLHB9Q6PI77 547 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 ZDHHC13Q8IUH4 622 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 CELF2-AS1Q8N7Q2 184 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 CNTD1Q8N815 330 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 Q8NFD4 153 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 SH2D3AQ9BRG2 576 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 CHMP1AQ9HD42 196 aaPredicted RBP16.77■□□□□ 0.28
CDK11B-201ENST00000340677 GRHL1Q9NZI5 618 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms