RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 HOXD13P35453 343 aa10.9□□□□□ -0.66
ATXN3-201ENST00000340660 SLC8A3P57103 927 aa10.9□□□□□ -0.66
ATXN3-201ENST00000340660 DLG4P78352 724 aa10.9□□□□□ -0.66
ATXN3-201ENST00000340660 ARF5P84085 180 aa10.9□□□□□ -0.66
ATXN3-201ENST00000340660 NCF4Q15080 339 aa10.9□□□□□ -0.66
ATXN3-201ENST00000340660 GOLGA7BQ2TAP0 167 aa10.9□□□□□ -0.66
ATXN3-201ENST00000340660 HP1BP3Q5SSJ5 553 aaPredicted RBP10.9□□□□□ -0.66
ATXN3-201ENST00000340660 CACHD1Q5VU97 1274 aa10.9□□□□□ -0.66
ATXN3-201ENST00000340660 CYB5D1Q6P9G0 228 aa10.9□□□□□ -0.66
ATXN3-201ENST00000340660 CERS6Q6ZMG9 384 aa10.9□□□□□ -0.66
ATXN3-201ENST00000340660 HIPK1Q86Z02 1210 aa10.9□□□□□ -0.66
ATXN3-201ENST00000340660 TAB3Q8N5C8 712 aaPredicted RBP10.9□□□□□ -0.66
ATXN3-201ENST00000340660 SLC4A11Q8NBS3 891 aa10.9□□□□□ -0.66
ATXN3-201ENST00000340660 C3orf20Q8ND61 904 aa10.9□□□□□ -0.66
ATXN3-201ENST00000340660 OR7D4Q8NG98 312 aa10.9□□□□□ -0.66
ATXN3-201ENST00000340660 LRFN5Q96NI6 719 aa10.9□□□□□ -0.66
ATXN3-201ENST00000340660 FOXP1Q9H334 677 aaPredicted RBP10.9□□□□□ -0.66
ATXN3-201ENST00000340660 EPS8L2Q9H6S3 715 aa10.9□□□□□ -0.66
ATXN3-201ENST00000340660 PPT2Q9UMR5 302 aa10.9□□□□□ -0.66
ATXN3-201ENST00000340660 PCM1Q15154 2024 aa10.9□□□□□ -0.66
ATXN3-201ENST00000340660 LRRIQ3A6PVS8 624 aaPredicted RBP10.89□□□□□ -0.67
ATXN3-201ENST00000340660 E9PLN8 166 aa10.89□□□□□ -0.67
ATXN3-201ENST00000340660 O00370 1275 aa10.89□□□□□ -0.67
ATXN3-201ENST00000340660 EIF1AYO14602 144 aaKnown RBP10.89□□□□□ -0.67
ATXN3-201ENST00000340660 ZNHIT1O43257 154 aa10.89□□□□□ -0.67
ATXN3-201ENST00000340660 HTRA2O43464 458 aaPredicted RBP10.89□□□□□ -0.67
ATXN3-201ENST00000340660 RECQL5O94762 991 aaPredicted RBP10.89□□□□□ -0.67
ATXN3-201ENST00000340660 ADCY5O95622 1261 aa10.89□□□□□ -0.67
ATXN3-201ENST00000340660 EBLN1P0CF75 366 aa10.89□□□□□ -0.67
ATXN3-201ENST00000340660 RORAP35398 523 aa10.89□□□□□ -0.67
ATXN3-201ENST00000340660 GSDMDP57764 484 aa10.89□□□□□ -0.67
ATXN3-201ENST00000340660 ALCAMQ13740 583 aa10.89□□□□□ -0.67
ATXN3-201ENST00000340660 AUHQ13825 339 aaKnown RBP10.89□□□□□ -0.67
ATXN3-201ENST00000340660 ALFQ53S48 1182 aa10.89□□□□□ -0.67
ATXN3-201ENST00000340660 GDPD4Q6W3E5 623 aa10.89□□□□□ -0.67
ATXN3-201ENST00000340660 TMEM126BQ8IUX1 230 aa10.89□□□□□ -0.67
ATXN3-201ENST00000340660 LILRB4Q8NHJ6 448 aa10.89□□□□□ -0.67
ATXN3-201ENST00000340660 IRGQQ8WZA9 623 aa10.89□□□□□ -0.67
ATXN3-201ENST00000340660 DNAJC19Q96DA6 116 aa10.89□□□□□ -0.67
ATXN3-201ENST00000340660 HMCESQ96FZ2 354 aa10.89□□□□□ -0.67
ATXN3-201ENST00000340660 VKORC1Q9BQB6 163 aa10.89□□□□□ -0.67
ATXN3-201ENST00000340660 ACSS3Q9H6R3 686 aa10.89□□□□□ -0.67
ATXN3-201ENST00000340660 CYP3A43Q9HB55 503 aa10.89□□□□□ -0.67
ATXN3-201ENST00000340660 NOL7Q9UMY1 257 aaKnown RBP10.89□□□□□ -0.67
ATXN3-201ENST00000340660 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.89□□□□□ -0.67
ATXN3-201ENST00000340660 LILRA5A6NI73 299 aa10.88□□□□□ -0.67
ATXN3-201ENST00000340660 PAX4O43316 350 aa10.88□□□□□ -0.67
ATXN3-201ENST00000340660 LDB2O43679 373 aa10.88□□□□□ -0.67
ATXN3-201ENST00000340660 KLK8O60259 260 aa10.88□□□□□ -0.67
ATXN3-201ENST00000340660 CRYABP02511 175 aaKnown RBP10.88□□□□□ -0.67
ATXN3-201ENST00000340660 GAP43P17677 238 aa10.88□□□□□ -0.67
ATXN3-201ENST00000340660 GM2AP17900 193 aa10.88□□□□□ -0.67
ATXN3-201ENST00000340660 RAB6AP20340 208 aa10.88□□□□□ -0.67
ATXN3-201ENST00000340660 CYP2J2P51589 502 aa10.88□□□□□ -0.67
ATXN3-201ENST00000340660 CDH4P55283 916 aa10.88□□□□□ -0.67
ATXN3-201ENST00000340660 DLX5P56178 289 aa10.88□□□□□ -0.67
ATXN3-201ENST00000340660 AIMP2Q13155 320 aaKnown RBP10.88□□□□□ -0.67
ATXN3-201ENST00000340660 SSPNQ14714 243 aa10.88□□□□□ -0.67
ATXN3-201ENST00000340660 SYPL2Q5VXT5 272 aa10.88□□□□□ -0.67
ATXN3-201ENST00000340660 PNCKQ6P2M8 343 aa10.88□□□□□ -0.67
ATXN3-201ENST00000340660 LINC00696Q6ZRV3 163 aa10.88□□□□□ -0.67
ATXN3-201ENST00000340660 FAM92BQ6ZTR7 304 aa10.88□□□□□ -0.67
ATXN3-201ENST00000340660 PPP1R32Q7Z5V6 425 aa10.88□□□□□ -0.67
ATXN3-201ENST00000340660 ATP6V0D2Q8N8Y2 350 aa10.88□□□□□ -0.67
ATXN3-201ENST00000340660 SIDT2Q8NBJ9 832 aaKnown RBP10.88□□□□□ -0.67
ATXN3-201ENST00000340660 SLC41A2Q96JW4 573 aa10.88□□□□□ -0.67
ATXN3-201ENST00000340660 ZNF514Q96K75 400 aaPredicted RBP10.88□□□□□ -0.67
ATXN3-201ENST00000340660 NIF3L1Q9GZT8 377 aa10.88□□□□□ -0.67
ATXN3-201ENST00000340660 ZFYVE1Q9HBF4 777 aa10.88□□□□□ -0.67
ATXN3-201ENST00000340660 PCDH12Q9NPG4 1184 aa10.88□□□□□ -0.67
ATXN3-201ENST00000340660 KCNJ16Q9NPI9 418 aa10.88□□□□□ -0.67
ATXN3-201ENST00000340660 TSPAN16Q9UKR8 245 aa10.88□□□□□ -0.67
ATXN3-201ENST00000340660 IGLV3-25P01717 112 aa10.87□□□□□ -0.67
ATXN3-201ENST00000340660 CFPP27918 469 aa10.87□□□□□ -0.67
ATXN3-201ENST00000340660 ERCC5P28715 1186 aaPredicted RBP10.87□□□□□ -0.67
ATXN3-201ENST00000340660 RGS7P49802 495 aa10.87□□□□□ -0.67
ATXN3-201ENST00000340660 RAD23BP54727 409 aa10.87□□□□□ -0.67
ATXN3-201ENST00000340660 EPHB1P54762 984 aa10.87□□□□□ -0.67
ATXN3-201ENST00000340660 PITX1P78337 314 aaPredicted RBP10.87□□□□□ -0.67
ATXN3-201ENST00000340660 ELP6Q0PNE2 266 aa10.87□□□□□ -0.67
ATXN3-201ENST00000340660 BST2Q10589 180 aaKnown RBP10.87□□□□□ -0.67
ATXN3-201ENST00000340660 EIF4EBP2Q13542 120 aaPredicted RBP10.87□□□□□ -0.67
ATXN3-201ENST00000340660 C10orf62Q5T681 223 aaPredicted RBP10.87□□□□□ -0.67
ATXN3-201ENST00000340660 RETSATQ6NUM9 610 aa10.87□□□□□ -0.67
ATXN3-201ENST00000340660 IYDQ6PHW0 289 aa10.87□□□□□ -0.67
ATXN3-201ENST00000340660 DOLPP1Q86YN1 238 aa10.87□□□□□ -0.67
ATXN3-201ENST00000340660 TMEM151BQ8IW70 566 aa10.87□□□□□ -0.67
ATXN3-201ENST00000340660 GUF1Q8N442 669 aaKnown RBP10.87□□□□□ -0.67
ATXN3-201ENST00000340660 MARVELD2Q8N4S9 558 aa10.87□□□□□ -0.67
ATXN3-201ENST00000340660 NECAB1Q8N987 351 aa10.87□□□□□ -0.67
ATXN3-201ENST00000340660 UBA3Q8TBC4 463 aa10.87□□□□□ -0.67
ATXN3-201ENST00000340660 CALML4Q96GE6 196 aa10.87□□□□□ -0.67
ATXN3-201ENST00000340660 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.87□□□□□ -0.67
ATXN3-201ENST00000340660 STN1Q9H668 368 aaKnown RBP10.87□□□□□ -0.67
ATXN3-201ENST00000340660 DMRT3Q9NQL9 472 aa10.87□□□□□ -0.67
ATXN3-201ENST00000340660 AGPAT3Q9NRZ7 376 aa10.87□□□□□ -0.67
ATXN3-201ENST00000340660 SLC17A4Q9Y2C5 497 aa10.87□□□□□ -0.67
ATXN3-201ENST00000340660 NUP210LQ5VU65 1888 aa10.87□□□□□ -0.67
ATXN3-201ENST00000340660 EPPK1P58107 5090 aaKnown RBP10.86□□□□□ -0.67
ATXN3-201ENST00000340660 IGHV5-51A0A0C4DH38 117 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms