RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 ZNF7P17097 686 aaPredicted RBP15.16■□□□□ 0.02
VAPA-201ENST00000340541 FASLGP48023 281 aa15.16■□□□□ 0.02
VAPA-201ENST00000340541 CTSCP53634 463 aa15.16■□□□□ 0.02
VAPA-201ENST00000340541 VAC14Q08AM6 782 aa15.16■□□□□ 0.02
VAPA-201ENST00000340541 CDH17Q12864 832 aa15.16■□□□□ 0.02
VAPA-201ENST00000340541 CYP1B1Q16678 543 aa15.16■□□□□ 0.02
VAPA-201ENST00000340541 PLA2G4EQ3MJ16 856 aa15.16■□□□□ 0.02
VAPA-201ENST00000340541 IYDQ6PHW0 289 aa15.16■□□□□ 0.02
VAPA-201ENST00000340541 ZNF605Q86T29 641 aa15.16■□□□□ 0.02
VAPA-201ENST00000340541 ZNF843Q8N446 348 aa15.16■□□□□ 0.02
VAPA-201ENST00000340541 Q8N9G6 341 aaPredicted RBP15.16■□□□□ 0.02
VAPA-201ENST00000340541 GDAP1Q8TB36 358 aa15.16■□□□□ 0.02
VAPA-201ENST00000340541 SLC37A2Q8TED4 501 aa15.16■□□□□ 0.02
VAPA-201ENST00000340541 ATXN7L3BQ96GX2 97 aa15.16■□□□□ 0.02
VAPA-201ENST00000340541 PRR11Q96HE9 360 aaPredicted RBP15.16■□□□□ 0.02
VAPA-201ENST00000340541 TIMM29Q9BSF4 260 aa15.16■□□□□ 0.02
VAPA-201ENST00000340541 AP1M1Q9BXS5 423 aa15.16■□□□□ 0.02
VAPA-201ENST00000340541 LRRN3Q9H3W5 708 aa15.16■□□□□ 0.02
VAPA-201ENST00000340541 ASB8Q9H765 288 aa15.16■□□□□ 0.02
VAPA-201ENST00000340541 KLC4Q9NSK0 619 aa15.16■□□□□ 0.02
VAPA-201ENST00000340541 NLE1Q9NVX2 485 aaPredicted RBP15.16■□□□□ 0.02
VAPA-201ENST00000340541 SNX12Q9UMY4 172 aa15.16■□□□□ 0.02
VAPA-201ENST00000340541 TRBV23OR9-2A0A075B6M9 112 aa15.15■□□□□ 0.02
VAPA-201ENST00000340541 D6RAR5 112 aa15.15■□□□□ 0.02
VAPA-201ENST00000340541 E7EVH7 732 aa15.15■□□□□ 0.02
VAPA-201ENST00000340541 KLK10O43240 276 aa15.15■□□□□ 0.02
VAPA-201ENST00000340541 SGTAO43765 313 aa15.15■□□□□ 0.02
VAPA-201ENST00000340541 APRTP07741 180 aa15.15■□□□□ 0.02
VAPA-201ENST00000340541 F3P13726 295 aa15.15■□□□□ 0.02
VAPA-201ENST00000340541 HADHAP40939 763 aa15.15■□□□□ 0.02
VAPA-201ENST00000340541 CFHR1Q03591 330 aa15.15■□□□□ 0.02
VAPA-201ENST00000340541 SPIDRQ14159 915 aa15.15■□□□□ 0.02
VAPA-201ENST00000340541 C3orf38Q5JPI3 329 aa15.15■□□□□ 0.02
VAPA-201ENST00000340541 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.15■□□□□ 0.02
VAPA-201ENST00000340541 PCSK4Q6UW60 755 aa15.15■□□□□ 0.02
VAPA-201ENST00000340541 C4orf22Q6V702 233 aa15.15■□□□□ 0.02
VAPA-201ENST00000340541 TMPRSS9Q7Z410 1059 aa15.15■□□□□ 0.02
VAPA-201ENST00000340541 SNX20Q7Z614 316 aa15.15■□□□□ 0.02
VAPA-201ENST00000340541 B3GNT8Q7Z7M8 397 aa15.15■□□□□ 0.02
VAPA-201ENST00000340541 CLEC14AQ86T13 490 aa15.15■□□□□ 0.02
VAPA-201ENST00000340541 ACTRT1Q8TDG2 376 aa15.15■□□□□ 0.02
VAPA-201ENST00000340541 LIN37Q96GY3 246 aaPredicted RBP15.15■□□□□ 0.02
VAPA-201ENST00000340541 CDKN2AIPNLQ96HQ2 116 aa15.15■□□□□ 0.02
VAPA-201ENST00000340541 NAF1Q96HR8 494 aaKnown RBP15.15■□□□□ 0.02
VAPA-201ENST00000340541 GFM1Q96RP9 751 aaKnown RBP15.15■□□□□ 0.02
VAPA-201ENST00000340541 PRDM8Q9NQV8 689 aa15.15■□□□□ 0.02
VAPA-201ENST00000340541 EIF2B3Q9NR50 452 aaKnown RBP15.15■□□□□ 0.02
VAPA-201ENST00000340541 CCDC187A0A096LP49 1063 aa15.14■□□□□ 0.01
VAPA-201ENST00000340541 TRBV5-4A0A0C4DH59 114 aa15.14■□□□□ 0.01
VAPA-201ENST00000340541 RHPN2P1A8MT19 583 aa15.14■□□□□ 0.01
VAPA-201ENST00000340541 PGRMC1O00264 195 aaKnown RBP15.14■□□□□ 0.01
VAPA-201ENST00000340541 CES2O00748 559 aa15.14■□□□□ 0.01
VAPA-201ENST00000340541 ZNF185O15231 689 aa15.14■□□□□ 0.01
VAPA-201ENST00000340541 MSNP26038 577 aaKnown RBP15.14■□□□□ 0.01
VAPA-201ENST00000340541 MC4RP32245 332 aa15.14■□□□□ 0.01
VAPA-201ENST00000340541 GPR3P46089 330 aa15.14■□□□□ 0.01
VAPA-201ENST00000340541 CDKN1CP49918 316 aaPredicted RBP15.14■□□□□ 0.01
VAPA-201ENST00000340541 ARSDP51689 593 aa15.14■□□□□ 0.01
VAPA-201ENST00000340541 OR1D5P58170 312 aa15.14■□□□□ 0.01
VAPA-201ENST00000340541 EIF3IQ13347 325 aaKnown RBP15.14■□□□□ 0.01
VAPA-201ENST00000340541 GTF2H3Q13889 308 aa15.14■□□□□ 0.01
VAPA-201ENST00000340541 SEPT6Q14141 434 aa15.14■□□□□ 0.01
VAPA-201ENST00000340541 INSCQ1MX18 579 aa15.14■□□□□ 0.01
VAPA-201ENST00000340541 CCDC38Q502W7 563 aa15.14■□□□□ 0.01
VAPA-201ENST00000340541 TAF1BQ53T94 588 aaPredicted RBP15.14■□□□□ 0.01
VAPA-201ENST00000340541 XKR5Q6UX68 686 aa15.14■□□□□ 0.01
VAPA-201ENST00000340541 GSTA5Q7RTV2 222 aa15.14■□□□□ 0.01
VAPA-201ENST00000340541 TRAPPC5Q8IUR0 188 aa15.14■□□□□ 0.01
VAPA-201ENST00000340541 NXPE1Q8N323 547 aa15.14■□□□□ 0.01
VAPA-201ENST00000340541 DNAAF3Q8N9W5 541 aa15.14■□□□□ 0.01
VAPA-201ENST00000340541 OR13J1Q8NGT2 312 aa15.14■□□□□ 0.01
VAPA-201ENST00000340541 STYXQ8WUJ0 223 aa15.14■□□□□ 0.01
VAPA-201ENST00000340541 NAT14Q8WUY8 206 aa15.14■□□□□ 0.01
VAPA-201ENST00000340541 RANBP9Q96S59 729 aa15.14■□□□□ 0.01
VAPA-201ENST00000340541 ZCCHC2Q9C0B9 1178 aaKnown RBP15.14■□□□□ 0.01
VAPA-201ENST00000340541 FAM96AQ9H5X1 160 aa15.14■□□□□ 0.01
VAPA-201ENST00000340541 SYNDIG1Q9H7V2 258 aa15.14■□□□□ 0.01
VAPA-201ENST00000340541 SCHIP1Q9P0W5 487 aaPredicted RBP15.14■□□□□ 0.01
VAPA-201ENST00000340541 ATXN7L1Q9ULK2 861 aaPredicted RBP15.14■□□□□ 0.01
VAPA-201ENST00000340541 DNAJC16Q9Y2G8 782 aa15.14■□□□□ 0.01
VAPA-201ENST00000340541 NEU2Q9Y3R4 380 aa15.14■□□□□ 0.01
VAPA-201ENST00000340541 CFAP46Q8IYW2 2715 aa15.13■□□□□ 0.01
VAPA-201ENST00000340541 IGLV3-16A0A075B6K0 115 aa15.13■□□□□ 0.01
VAPA-201ENST00000340541 CCDC78A2IDD5 438 aa15.13■□□□□ 0.01
VAPA-201ENST00000340541 PMS2P1A4D2B8 440 aa15.13■□□□□ 0.01
VAPA-201ENST00000340541 OR2AG2A6NM03 316 aa15.13■□□□□ 0.01
VAPA-201ENST00000340541 K7ENP7 123 aa15.13■□□□□ 0.01
VAPA-201ENST00000340541 FANCGO15287 622 aa15.13■□□□□ 0.01
VAPA-201ENST00000340541 SNX2O60749 519 aa15.13■□□□□ 0.01
VAPA-201ENST00000340541 POP7O75817 140 aaKnown RBP15.13■□□□□ 0.01
VAPA-201ENST00000340541 ITGA2BP08514 1039 aa15.13■□□□□ 0.01
VAPA-201ENST00000340541 PRSS56P0CW18 603 aa15.13■□□□□ 0.01
VAPA-201ENST00000340541 BRAFP15056 766 aa15.13■□□□□ 0.01
VAPA-201ENST00000340541 ITGALP20701 1170 aa15.13■□□□□ 0.01
VAPA-201ENST00000340541 CD1CP29017 333 aa15.13■□□□□ 0.01
VAPA-201ENST00000340541 LMAN1P49257 510 aa15.13■□□□□ 0.01
VAPA-201ENST00000340541 DMPKQ09013 629 aa15.13■□□□□ 0.01
VAPA-201ENST00000340541 TRIP13Q15645 432 aaPredicted RBP15.13■□□□□ 0.01
VAPA-201ENST00000340541 GPR33Q49SQ1 333 aa15.13■□□□□ 0.01
VAPA-201ENST00000340541 ARHGAP40Q5TG30 622 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms