RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 SLC9A4Q6AI14 798 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 CNSTQ6PJW8 725 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 FAM124AQ86V42 546 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 CDC26Q8NHZ8 85 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 PPTC7Q8NI37 304 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 MAGEE2Q8TD90 523 aaPredicted RBP3.26□□□□□ -1.89
CSMD3-202ENST00000339701 SMAD5Q99717 465 aaKnown RBP3.26□□□□□ -1.89
CSMD3-202ENST00000339701 MIPEPQ99797 713 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 CPNE1Q99829 537 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 RBM4BQ9BQ04 359 aaKnown RBP3.26□□□□□ -1.89
CSMD3-202ENST00000339701 RBM4Q9BWF3 364 aaKnown RBP3.26□□□□□ -1.89
CSMD3-202ENST00000339701 DPEP2Q9H4A9 486 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 CDHR5Q9HBB8 845 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 TMEM165Q9HC07 324 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 GIT1Q9Y2X7 761 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 HSPE1-MOB4S4R3N1 261 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 C17orf113A0A1B0GUU1 675 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 FAM196BA6NMK8 535 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 NUDT19A8MXV4 375 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 CLDN25C9JDP6 229 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 FCHO1O14526 889 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 SASH3O75995 380 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 PLEKHA8P1O95397 391 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 ALDOAP04075 364 aaKnown RBP3.26□□□□□ -1.89
CSMD3-202ENST00000339701 PAEPP09466 180 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 CD58P19256 250 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 KLRC1P26715 233 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 NDUFS1P28331 727 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 IGFALSP35858 605 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 CDH15P55291 814 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 CYP4F8P98187 520 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 TBCELQ5QJ74 424 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 MOB2Q70IA6 237 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 TXNRD3Q86VQ6 643 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 CREG2Q8IUH2 290 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 SLC43A2Q8N370 569 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 RPLP0P6Q8NHW5 317 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 ADAMTS19Q8TE59 1207 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 MYLIPQ8WY64 445 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 TMA16Q96EY4 203 aaKnown RBP3.26□□□□□ -1.89
CSMD3-202ENST00000339701 GIMAP5Q96F15 307 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 ELAC2Q9BQ52 826 aaKnown RBP3.26□□□□□ -1.89
CSMD3-202ENST00000339701 NIF3L1Q9GZT8 377 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 BLZF1Q9H2G9 400 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 GLOD4Q9HC38 313 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 SAYSD1Q9NPB0 183 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 POLLQ9UGP5 575 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 AGO2Q9UKV8 859 aaKnown RBP3.26□□□□□ -1.89
CSMD3-202ENST00000339701 RAB21Q9UL25 225 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 BARX2Q9UMQ3 279 aaPredicted RBP3.26□□□□□ -1.89
CSMD3-202ENST00000339701 PTPRJQ12913 1337 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.26□□□□□ -1.89
CSMD3-202ENST00000339701 BTN3A3O00478 584 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 CYB561D2O14569 222 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 SCN2BO60939 215 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 OAZ2O95190 189 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 PIGNO95427 931 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 VIPP01282 170 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 RHOCP08134 193 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 TACSTD2P09758 323 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 IRS1P35568 1242 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 NUDT6P53370 316 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 CRYBB1P53674 252 aaPredicted RBP3.26□□□□□ -1.89
CSMD3-202ENST00000339701 ST3GAL1Q11201 340 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 UGT3A2Q3SY77 523 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 PLEKHG4Q58EX7 1191 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 ERMARDQ5T6L9 678 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 MSANTD1Q6ZTZ1 278 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 DENND5BQ6ZUT9 1274 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 RBFAQ8N0V3 343 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 TMEM86AQ8N2M4 240 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 OR6P1Q8NGX9 317 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 BTBD1Q9H0C5 482 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 OTOFQ9HC10 1997 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 ALG13Q9NP73 1137 aaKnown RBP3.26□□□□□ -1.89
CSMD3-202ENST00000339701 IFT46Q9NQC8 304 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 PDGFCQ9NRA1 345 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 KBTBD4Q9NVX7 518 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 IL20Q9NYY1 176 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 RPS6KB2Q9UBS0 482 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 FBXO2Q9UK22 296 aaPredicted RBP3.26□□□□□ -1.89
CSMD3-202ENST00000339701 GNEQ9Y223 722 aaKnown RBP3.26□□□□□ -1.89
CSMD3-202ENST00000339701 FARSAQ9Y285 508 aaKnown RBP3.26□□□□□ -1.89
CSMD3-202ENST00000339701 MTCL1Q9Y4B5 1905 aaKnown RBP3.26□□□□□ -1.89
CSMD3-202ENST00000339701 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 IDSB3KWA1 339 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 ZNF879B4DU55 563 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 PDLIM1O00151 329 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 TOR1AO14656 332 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 PMM2O15305 246 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 PDPK1O15530 556 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 DHX15O43143 795 aaKnown RBP3.26□□□□□ -1.89
CSMD3-202ENST00000339701 CATP04040 527 aaKnown RBP3.26□□□□□ -1.89
CSMD3-202ENST00000339701 GNAO1P09471 354 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 EPB42P16452 691 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 IDSP22304 550 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 GABRR2P28476 465 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 SERPINA4P29622 427 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 TM4SF4P48230 202 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 MNX1P50219 401 aaPredicted RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms