RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 GSTM4Q03013 218 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 MGAT5Q09328 741 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 SLMAPQ14BN4 828 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 INSCQ1MX18 579 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 BCL7AQ4VC05 210 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 STEAP4Q687X5 459 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 KCTD16Q68DU8 428 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 ZNF449Q6P9G9 518 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 CRTC3Q6UUV7 619 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 PACS1Q6VY07 963 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 CYS1Q717R9 158 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 LDB1Q86U70 411 aaPredicted RBP11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 AMZ2Q86W34 360 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 LRRC6Q86X45 466 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 EID2Q8N6I1 236 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 FAM46DQ8NEK8 389 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 GSDMBQ8TAX9 411 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 CERS2Q96G23 380 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 TIMM29Q9BSF4 260 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 CCM2Q9BSQ5 444 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 TSSK1BQ9BXA7 367 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 SLC32A1Q9H598 525 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 IARS2Q9NSE4 1012 aaKnown RBP11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 EVA1BQ9NVM1 165 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 INTS10Q9NVR2 710 aaKnown RBP11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 NLGN3Q9NZ94 848 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 FBXO5Q9UKT4 447 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 CDV3Q9UKY7 258 aaKnown RBP11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 NFU1Q9UMS0 254 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 OTOGLQ3ZCN5 2332 aa11.74□□□□□ -0.53
SPTLC1-202ENST00000337841 C17orf113A0A1B0GUU1 675 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 MGAT4DA6NG13 374 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 H3BMM5 538 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 SLC30A4O14863 429 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 FFAR2O15552 330 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 SH3BP5O60239 455 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 SPAG6O75602 509 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 FTH1P02794 183 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 ACP5P13686 325 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 IDSP22304 550 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 ACTR1BP42025 376 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 RPIAP49247 311 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 CTSCP53634 463 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 ACTR1AP61163 376 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 SEMA3AQ14563 771 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 FASTKD3Q14CZ7 662 aaKnown RBP11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 TCEA2Q15560 299 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 DEFB133Q30KQ1 61 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 ZNF470Q6ECI4 717 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 PTRHD1Q6GMV3 140 aaKnown RBP11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 KIAA0408Q6ZU52 694 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 KANSL1Q7Z3B3 1105 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 CILP2Q8IUL8 1156 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 RELL1Q8IUW5 271 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 ZNF547Q8IVP9 402 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 CLDN19Q8N6F1 224 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 OR4C6Q8NH72 309 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 CDKL2Q92772 493 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 LINC00615Q96LM1 132 aaPredicted RBP11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 C9orf72Q96LT7 481 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 CDC6Q99741 560 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 BOCQ9BWV1 1114 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 CCDC68Q9H2F9 335 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 DPEP2Q9H4A9 486 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 KLC4Q9NSK0 619 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 MOCS1Q9NZB8 636 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 NCKIPSDQ9NZQ3 722 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 PLEKHM1Q9Y4G2 1056 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 PCDHB1Q9Y5F3 818 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 WDFY4Q6ZS81 3184 aa11.73□□□□□ -0.53
SPTLC1-202ENST00000337841 EP300Q09472 2414 aaPredicted RBP11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 DOCK9Q9BZ29 2069 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 PLXNA2O75051 1894 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 TNRC6BQ9UPQ9 1833 aaKnown RBP11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 UBA6A0AVT1 1052 aaPredicted RBP11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 OR1I1O60431 355 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 SNX2O60749 519 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 LDOC1O95751 146 aaPredicted RBP11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 S1PR4O95977 384 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 ESR1P03372 595 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 SLC2A4P14672 509 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 RPS3P23396 243 aaKnown RBP eCLIP11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 MCM3P25205 808 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 AK4P27144 223 aaPredicted RBP11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 SSTR1P30872 391 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 FMO4P31512 558 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 PHBP35232 272 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 PRLHRP49683 370 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 DUSP3P51452 185 aaPredicted RBP11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 ILF2Q12905 390 aaKnown RBP11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 CTBP1Q13363 440 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 SMAD1Q15797 465 aaKnown RBP11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 KYNUQ16719 465 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 TYSND1Q2T9J0 566 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 TEDDM1Q5T9Z0 273 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 ZCCHC8Q6NZY4 707 aaKnown RBP11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 OGFOD3Q6PK18 319 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 SLC30A9Q6PML9 568 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 CCNI2Q6ZMN8 369 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms