RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 TBC1D3DA0A087WVF3 549 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 TBC1D3IA0A087WXS9 549 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 TBC1D3EA0A087X179 549 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 TBC1D3KA0A087X1G2 549 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 TBC1D3FA6NER0 549 aaPredicted RBP14.5□□□□□ -0.09
CBX3-201ENST00000337620 NEMP2A6NFY4 417 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 OR2AG2A6NM03 316 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 TBC1D3LB9A6J9 549 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 PLRG1O43660 514 aaKnown RBP14.5□□□□□ -0.09
CBX3-201ENST00000337620 TSPAN12O95859 305 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 SERPINE1P05121 402 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 TBC1D3HP0C7X1 549 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 ATP6V0D1P61421 351 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 PRKCQQ04759 706 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 OVGP1Q12889 678 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 TMEM115Q12893 351 aaPredicted RBP14.5□□□□□ -0.09
CBX3-201ENST00000337620 UBXN2BQ14CS0 331 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 OR4D1Q15615 310 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 TBC1D3GQ6DHY5 549 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 TBC1D3CQ6IPX1 549 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 TRIM74Q86UV6 250 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 TBC1D3Q8IZP1 549 aaPredicted RBP14.5□□□□□ -0.09
CBX3-201ENST00000337620 ZBTB2Q8N680 514 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 PLA2G15Q8NCC3 412 aa14.5□□□□□ -0.09
CBX3-201ENST00000337620 TFB2MQ9H5Q4 396 aaKnown RBP14.5□□□□□ -0.09
CBX3-201ENST00000337620 CNOT6Q9ULM6 557 aaKnown RBP14.5□□□□□ -0.09
CBX3-201ENST00000337620 ZFR2Q9UPR6 939 aaKnown RBP14.5□□□□□ -0.09
CBX3-201ENST00000337620 PIKFYVEQ9Y2I7 2098 aa14.49□□□□□ -0.09
CBX3-201ENST00000337620 TRPM6Q9BX84 2022 aa14.49□□□□□ -0.09
CBX3-201ENST00000337620 CDC7O00311 574 aa14.49□□□□□ -0.09
CBX3-201ENST00000337620 BTN3A1O00481 513 aa14.49□□□□□ -0.09
CBX3-201ENST00000337620 MAGEC1O60732 1142 aa14.49□□□□□ -0.09
CBX3-201ENST00000337620 PAK4O96013 591 aaPredicted RBP14.49□□□□□ -0.09
CBX3-201ENST00000337620 PCCBP05166 539 aa14.49□□□□□ -0.09
CBX3-201ENST00000337620 ATP5F1P24539 256 aaPredicted RBP14.49□□□□□ -0.09
CBX3-201ENST00000337620 GRK2P25098 689 aa14.49□□□□□ -0.09
CBX3-201ENST00000337620 TARSP26639 723 aaKnown RBP14.49□□□□□ -0.09
CBX3-201ENST00000337620 ADPRHP54922 357 aa14.49□□□□□ -0.09
CBX3-201ENST00000337620 RPS21P63220 83 aaKnown RBP14.49□□□□□ -0.09
CBX3-201ENST00000337620 SGCGQ13326 291 aa14.49□□□□□ -0.09
CBX3-201ENST00000337620 TSNQ15631 228 aaKnown RBP14.49□□□□□ -0.09
CBX3-201ENST00000337620 LIPMQ5VYY2 423 aa14.49□□□□□ -0.09
CBX3-201ENST00000337620 CGB2Q6NT52 195 aa14.49□□□□□ -0.09
CBX3-201ENST00000337620 NLRP8Q86W28 1048 aa14.49□□□□□ -0.09
CBX3-201ENST00000337620 HMGB4Q8WW32 186 aa14.49□□□□□ -0.09
CBX3-201ENST00000337620 KIAA1191Q96A73 305 aa14.49□□□□□ -0.09
CBX3-201ENST00000337620 MOCOSQ96EN8 888 aa14.49□□□□□ -0.09
CBX3-201ENST00000337620 LENG8Q96PV6 779 aaPredicted RBP14.49□□□□□ -0.09
CBX3-201ENST00000337620 ZMYND15Q9H091 742 aa14.49□□□□□ -0.09
CBX3-201ENST00000337620 CYP4F12Q9HCS2 524 aa14.49□□□□□ -0.09
CBX3-201ENST00000337620 ACSS2Q9NR19 701 aa14.49□□□□□ -0.09
CBX3-201ENST00000337620 IKZF3Q9UKT9 509 aa14.49□□□□□ -0.09
CBX3-201ENST00000337620 RNF112Q9ULX5 631 aa14.49□□□□□ -0.09
CBX3-201ENST00000337620 A0A1W2PQU0 124 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 KRBA1A5PL33 1030 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 NPEPPSL1A6NEC2 478 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 F8W8V4 182 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 RNGTTO60942 597 aaKnown RBP14.48□□□□□ -0.09
CBX3-201ENST00000337620 DGKAP23743 735 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 CCR7P32248 378 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 SLC1A6P48664 564 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 RGS4P49798 205 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 NAGLUP54802 743 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 SFSWAPQ12872 951 aaKnown RBP14.48□□□□□ -0.09
CBX3-201ENST00000337620 WSCD2Q2TBF2 565 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 TTLL9Q3SXZ7 439 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 ACSBG2Q5FVE4 666 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 PIGWQ7Z7B1 504 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 KBTBD6Q86V97 674 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 PGBD3Q8N328 593 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 BEND7Q8N7W2 519 aaPredicted RBP14.48□□□□□ -0.09
CBX3-201ENST00000337620 RASGEF1AQ8N9B8 481 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 RHEBL1Q8TAI7 183 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 STAG3L4Q8TBR4 150 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 FAM131CQ96AQ9 280 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 PHF21BQ96EK2 531 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 GATA5Q9BWX5 397 aaPredicted RBP14.48□□□□□ -0.09
CBX3-201ENST00000337620 C20orf27Q9GZN8 174 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 CD93Q9NPY3 652 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 THAP1Q9NVV9 213 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 KCTD5Q9NXV2 234 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 MRPS17Q9Y2R5 130 aaKnown RBP14.48□□□□□ -0.09
CBX3-201ENST00000337620 ITM2AO43736 263 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 SNX3O60493 162 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 SNNO75324 88 aaPredicted RBP14.48□□□□□ -0.09
CBX3-201ENST00000337620 LYPLA1O75608 230 aaPredicted RBP14.48□□□□□ -0.09
CBX3-201ENST00000337620 CDK14O94921 469 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 AP2A2O94973 939 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 GABRG2P18507 467 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 LRRC32Q14392 662 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 PNCKQ6P2M8 343 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 USP30Q70CQ3 517 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 ZNF771Q7L3S4 317 aaPredicted RBP14.48□□□□□ -0.09
CBX3-201ENST00000337620 PIWIL4Q7Z3Z4 852 aaKnown RBP14.48□□□□□ -0.09
CBX3-201ENST00000337620 GRAMD1AQ96CP6 724 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 SEC16BQ96JE7 1060 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 OR2AG1Q9H205 316 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 POLMQ9NP87 494 aaPredicted RBP14.48□□□□□ -0.09
CBX3-201ENST00000337620 LATS2Q9NRM7 1088 aa14.48□□□□□ -0.09
CBX3-201ENST00000337620 WNT16Q9UBV4 365 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms