RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 KANK2Q63ZY3 851 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 NAIF1Q69YI7 327 aaPredicted RBP8.75□□□□□ -1.01
SNCA-201ENST00000336904 ASTLQ6HA08 431 aaPredicted RBP8.75□□□□□ -1.01
SNCA-201ENST00000336904 Q6ZVU0 165 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 ARPINQ7Z6K5 226 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 CACUL1Q86Y37 369 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 TMEM25Q86YD3 366 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 PHYKPLQ8IUZ5 450 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 MIER2Q8N344 545 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 CHST14Q8NCH0 376 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 PDZD8Q8NEN9 1154 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 OR10Q1Q8NGQ4 319 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 CYB5D2Q8WUJ1 264 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 PPP2R3CQ969Q6 453 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 PPM1MQ96MI6 270 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 SEPHS2Q99611 448 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 DERL2Q9GZP9 239 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 LINC00597Q9H2U6 94 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 TFB2MQ9H5Q4 396 aaKnown RBP8.75□□□□□ -1.01
SNCA-201ENST00000336904 CRLS1Q9UJA2 301 aa8.75□□□□□ -1.01
SNCA-201ENST00000336904 POLR3HQ9Y535 204 aaPredicted RBP8.75□□□□□ -1.01
SNCA-201ENST00000336904 OAS3Q9Y6K5 1087 aaKnown RBP8.75□□□□□ -1.01
SNCA-201ENST00000336904 E2F3O00716 465 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 GAPDHSO14556 408 aaPredicted RBP8.74□□□□□ -1.01
SNCA-201ENST00000336904 SYNCRIPO60506 623 aaKnown RBP8.74□□□□□ -1.01
SNCA-201ENST00000336904 SEC24DO94855 1032 aaPredicted RBP8.74□□□□□ -1.01
SNCA-201ENST00000336904 CHRM1P11229 460 aaPredicted RBP8.74□□□□□ -1.01
SNCA-201ENST00000336904 COL6A1P12109 1028 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 CLCN7P51798 805 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 BCL2L1Q07817 233 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 NFYCQ13952 458 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 TRIM25Q14258 630 aaKnown RBP8.74□□□□□ -1.01
SNCA-201ENST00000336904 PTGR1Q14914 329 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 PLPP4Q5VZY2 271 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 ALG1LQ6GMV1 187 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 SETD3Q86TU7 594 aaPredicted RBP8.74□□□□□ -1.01
SNCA-201ENST00000336904 LCA5Q86VQ0 697 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 FIBCD1Q8N539 461 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 GPR26Q8NDV2 337 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 OR4F6Q8NGB9 312 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 METTL6Q8TCB7 284 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 PIH1D2Q8WWB5 315 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 GFM2Q969S9 779 aaKnown RBP8.74□□□□□ -1.01
SNCA-201ENST00000336904 ALG14Q96F25 216 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 PAWRQ96IZ0 340 aaKnown RBP8.74□□□□□ -1.01
SNCA-201ENST00000336904 GBP5Q96PP8 586 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 CLPBQ9H078 707 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 VCXQ9H320 206 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 SYTL2Q9HCH5 934 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 CMTM6Q9NX76 183 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 OR51B4Q9Y5P0 310 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 ARHGAP10A1A4S6 786 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 TYW5A2RUC4 315 aaKnown RBP8.74□□□□□ -1.01
SNCA-201ENST00000336904 C7orf72A4D263 438 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 CCDC160A6NGH7 325 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 GIPC1O14908 333 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 PGLSO95336 258 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 C1QCP02747 245 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 PYGLP06737 847 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 C8AP07357 584 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 LBPP18428 481 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 HLA-FP30511 346 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 TTPAP49638 278 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 MNX1P50219 401 aaPredicted RBP8.74□□□□□ -1.01
SNCA-201ENST00000336904 NEK2P51955 445 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 MTPNP58546 118 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 HSPA14Q0VDF9 509 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 BOP1Q14137 746 aaKnown RBP8.74□□□□□ -1.01
SNCA-201ENST00000336904 ARHGEF7Q14155 803 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 SELPLGQ14242 412 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 ABRAXAS2Q15018 415 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 NR6A1Q15406 480 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 SF1Q15637 639 aaKnown RBP8.74□□□□□ -1.01
SNCA-201ENST00000336904 C5orf22Q49AR2 442 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 HMBOX1Q6NT76 420 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 GPRIN3Q6ZVF9 776 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 SCAMP4Q969E2 229 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 TOP1MTQ969P6 601 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 PRPF18Q99633 342 aaKnown RBP8.74□□□□□ -1.01
SNCA-201ENST00000336904 SLC25A23Q9BV35 468 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 SLC46A2Q9BY10 475 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 INTS10Q9NVR2 710 aaKnown RBP8.74□□□□□ -1.01
SNCA-201ENST00000336904 CNOT6Q9ULM6 557 aaKnown RBP8.74□□□□□ -1.01
SNCA-201ENST00000336904 AP4S1Q9Y587 144 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 BACE2Q9Y5Z0 518 aa8.74□□□□□ -1.01
SNCA-201ENST00000336904 ZFC3H1O60293 1989 aaKnown RBP8.73□□□□□ -1.01
SNCA-201ENST00000336904 FXYD1O00168 92 aa8.73□□□□□ -1.01
SNCA-201ENST00000336904 INPP4BO15327 924 aa8.73□□□□□ -1.01
SNCA-201ENST00000336904 G6PDP11413 515 aa8.73□□□□□ -1.01
SNCA-201ENST00000336904 PCNAP12004 261 aa8.73□□□□□ -1.01
SNCA-201ENST00000336904 EFNA1P20827 205 aaPredicted RBP8.73□□□□□ -1.01
SNCA-201ENST00000336904 SUOXP51687 545 aa8.73□□□□□ -1.01
SNCA-201ENST00000336904 INHBCP55103 352 aa8.73□□□□□ -1.01
SNCA-201ENST00000336904 LRRC26Q2I0M4 334 aa8.73□□□□□ -1.01
SNCA-201ENST00000336904 RARS2Q5T160 578 aaKnown RBP8.73□□□□□ -1.01
SNCA-201ENST00000336904 OGFRL1Q5TC84 451 aaPredicted RBP8.73□□□□□ -1.01
SNCA-201ENST00000336904 LRRC66Q68CR7 880 aa8.73□□□□□ -1.01
SNCA-201ENST00000336904 SERPINA13PQ6UXR4 307 aa8.73□□□□□ -1.01
SNCA-201ENST00000336904 GOLGA7Q7Z5G4 137 aa8.73□□□□□ -1.01
SNCA-201ENST00000336904 SLC15A3Q8IY34 581 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms