RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 WNT8BQ93098 351 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 TMEM143Q96AN5 459 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 CADM1Q9BY67 442 aaKnown RBP5.48□□□□□ -1.53
PTPRB-202ENST00000334414 FOLH1BQ9HBA9 442 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 ERVK-5Q9HDB9 667 aa5.48□□□□□ -1.53
PTPRB-202ENST00000334414 A0A1B0GVM2 712 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 TCAF2A6NFQ2 919 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 TBX1O43435 398 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 CYB5AP00167 134 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 TLE3Q04726 772 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 MTMR2Q13614 643 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 ZIK1Q3SY52 487 aaPredicted RBP5.47□□□□□ -1.53
PTPRB-202ENST00000334414 SH3RF1Q7Z6J0 888 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 CDCA5Q96FF9 252 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 LHX5Q9H2C1 402 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 MALT1Q9UDY8 824 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 CDH10Q9Y6N8 788 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 PDYNP01213 254 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 SUPT20HL2P0C7V6 817 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 GRK5P34947 590 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 GPAT3Q53EU6 434 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 SETMARQ53H47 684 aaPredicted RBP5.47□□□□□ -1.53
PTPRB-202ENST00000334414 INTS6LQ5JSJ4 861 aaKnown RBP5.47□□□□□ -1.53
PTPRB-202ENST00000334414 RAB41Q5JT25 222 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 ANKRD22Q5VYY1 191 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 SNX33Q8WV41 574 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 C16orf58Q96GQ5 468 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 CEP295NLQ96MC4 621 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 SLC39A3Q9BRY0 314 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 PRDM5Q9NQX1 630 aaPredicted RBP5.47□□□□□ -1.53
PTPRB-202ENST00000334414 PCDHB16Q9NRJ7 776 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 THG1LQ9NWX6 298 aaKnown RBP5.47□□□□□ -1.53
PTPRB-202ENST00000334414 FARSAQ9Y285 508 aaKnown RBP5.47□□□□□ -1.53
PTPRB-202ENST00000334414 FPGTO14772 594 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 MT-ND2P03891 347 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 GIMD1P0DJR0 217 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 TCF7P36402 384 aaPredicted RBP5.47□□□□□ -1.53
PTPRB-202ENST00000334414 TXNL4AP83876 142 aaKnown RBP5.47□□□□□ -1.53
PTPRB-202ENST00000334414 XKR6Q5GH73 641 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 MEDAGQ5VYS4 303 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 RPL13AP3Q6NVV1 102 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 TAPT1Q6NXT6 567 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 RNF31Q96EP0 1072 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 VMP1Q96GC9 406 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 CPXM1Q96SM3 734 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 RIOK2Q9BVS4 552 aaKnown RBP5.47□□□□□ -1.53
PTPRB-202ENST00000334414 TMEM134Q9H6X4 195 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 ATP13A3Q9H7F0 1226 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 LRTM1Q9HBL6 345 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 CSN2P05814 226 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 OR1E1P30953 314 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 ALDH7A1P49419 539 aaKnown RBP5.47□□□□□ -1.53
PTPRB-202ENST00000334414 LSM3P62310 102 aaKnown RBP5.47□□□□□ -1.53
PTPRB-202ENST00000334414 FAM91A1Q658Y4 838 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 GLYATQ6IB77 296 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 ZFPM1Q8IX07 1006 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 IRGQQ8WZA9 623 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 SMG7Q92540 1137 aaKnown RBP5.47□□□□□ -1.53
PTPRB-202ENST00000334414 ZNF354BQ96LW1 612 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 ARL8BQ9NVJ2 186 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 QPCTLQ9NXS2 382 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 KCTD5Q9NXV2 234 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 TAS2R3Q9NYW6 316 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 CD163L1Q9NR16 1453 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 CSDE1O75534 798 aaKnown RBP5.47□□□□□ -1.53
PTPRB-202ENST00000334414 IL3P08700 152 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 CDKL1Q00532 357 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 RNASEH2BQ5TBB1 312 aaKnown RBP5.47□□□□□ -1.53
PTPRB-202ENST00000334414 LPCAT4Q643R3 524 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 KLHL35Q6PF15 583 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 CHSY3Q70JA7 882 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 RERGQ96A58 199 aaPredicted RBP5.47□□□□□ -1.53
PTPRB-202ENST00000334414 AGAP2Q99490 1192 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 MRI1Q9BV20 369 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 DERAQ9Y315 318 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 MST1RQ04912 1400 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 ROBO2Q9HCK4 1378 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 C2orf71A6NGG8 1288 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 EIF1AYO14602 144 aaKnown RBP5.47□□□□□ -1.53
PTPRB-202ENST00000334414 MICAL2O94851 1124 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 FGF19O95750 216 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 THP07101 528 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 EIF1AXP47813 144 aaKnown RBP5.47□□□□□ -1.53
PTPRB-202ENST00000334414 SCNN1BP51168 640 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 FAPQ12884 760 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 HEPACAMQ14CZ8 416 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 NADK2Q4G0N4 442 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 FAM171BQ6P995 826 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 OR52K1Q8NGK4 314 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 KAT2BQ92831 832 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 AP2M1Q96CW1 435 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 ZYG11BQ9C0D3 744 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 NMUR2Q9GZQ4 415 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 FBXO6Q9NRD1 293 aaPredicted RBP5.47□□□□□ -1.53
PTPRB-202ENST00000334414 GRIN2DO15399 1336 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 PRR5-ARHGAP8B1AHC4 643 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 ETFAP13804 333 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 CDC25CP30307 473 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 NRG3P56975 720 aa5.47□□□□□ -1.53
PTPRB-202ENST00000334414 SNRPD1P62314 119 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms