RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 CBX2Q14781 532 aaPredicted RBP17.98■□□□□ 0.47
PKP3-201ENST00000331563 UBE2Q1Q7Z7E8 422 aa17.98■□□□□ 0.47
PKP3-201ENST00000331563 BEND7Q8N7W2 519 aaPredicted RBP17.98■□□□□ 0.47
PKP3-201ENST00000331563 BTN2A3PQ96KV6 586 aa17.98■□□□□ 0.47
PKP3-201ENST00000331563 SNX18Q96RF0 628 aa17.98■□□□□ 0.47
PKP3-201ENST00000331563 ITM2CQ9NQX7 267 aa17.98■□□□□ 0.47
PKP3-201ENST00000331563 GIMAP4Q9NUV9 329 aa17.98■□□□□ 0.47
PKP3-201ENST00000331563 PIN4Q9Y237 131 aaKnown RBP17.98■□□□□ 0.47
PKP3-201ENST00000331563 EIF3LQ9Y262 564 aaKnown RBP17.98■□□□□ 0.47
PKP3-201ENST00000331563 A0A087X1B8 175 aa17.98■□□□□ 0.47
PKP3-201ENST00000331563 F2P00734 622 aa17.98■□□□□ 0.47
PKP3-201ENST00000331563 CHRNA1P02708 482 aa17.98■□□□□ 0.47
PKP3-201ENST00000331563 POLR2CP19387 275 aaPredicted RBP17.98■□□□□ 0.47
PKP3-201ENST00000331563 IGFBP6P24592 240 aaPredicted RBP17.98■□□□□ 0.47
PKP3-201ENST00000331563 PSMB9P28065 219 aa17.98■□□□□ 0.47
PKP3-201ENST00000331563 ADORA2BP29275 332 aa17.98■□□□□ 0.47
PKP3-201ENST00000331563 CRHR2Q13324 411 aa17.98■□□□□ 0.47
PKP3-201ENST00000331563 SELPLGQ14242 412 aa17.98■□□□□ 0.47
PKP3-201ENST00000331563 SNAP47Q5SQN1 464 aa17.98■□□□□ 0.47
PKP3-201ENST00000331563 AGAP9Q5VTM2 703 aa17.98■□□□□ 0.47
PKP3-201ENST00000331563 ZNF470Q6ECI4 717 aa17.98■□□□□ 0.47
PKP3-201ENST00000331563 DEPDC4Q8N2C3 294 aa17.98■□□□□ 0.47
PKP3-201ENST00000331563 SLC35F5Q8WV83 523 aa17.98■□□□□ 0.47
PKP3-201ENST00000331563 TMEM125Q96AQ2 219 aa17.98■□□□□ 0.47
PKP3-201ENST00000331563 NSMCE2Q96MF7 247 aa17.98■□□□□ 0.47
PKP3-201ENST00000331563 FAM118AQ9NWS6 357 aa17.98■□□□□ 0.47
PKP3-201ENST00000331563 PCDHA9Q9Y5H5 950 aa17.98■□□□□ 0.47
PKP3-201ENST00000331563 EVPLLA8MZ36 301 aa17.97■□□□□ 0.47
PKP3-201ENST00000331563 NTRK1P04629 796 aa17.97■□□□□ 0.47
PKP3-201ENST00000331563 CD47Q08722 323 aa17.97■□□□□ 0.47
PKP3-201ENST00000331563 CTU2Q2VPK5 515 aaKnown RBP17.97■□□□□ 0.47
PKP3-201ENST00000331563 TUBA3EQ6PEY2 450 aa17.97■□□□□ 0.47
PKP3-201ENST00000331563 FKBP9P1Q75LS8 142 aa17.97■□□□□ 0.47
PKP3-201ENST00000331563 ZNF598Q86UK7 904 aaKnown RBP17.97■□□□□ 0.47
PKP3-201ENST00000331563 P2RY8Q86VZ1 359 aa17.97■□□□□ 0.47
PKP3-201ENST00000331563 CENPIQ92674 756 aaPredicted RBP17.97■□□□□ 0.47
PKP3-201ENST00000331563 TRIM63Q969Q1 353 aa17.97■□□□□ 0.47
PKP3-201ENST00000331563 DSN1Q9H410 356 aa17.97■□□□□ 0.47
PKP3-201ENST00000331563 ZNF639Q9UID6 485 aa17.97■□□□□ 0.47
PKP3-201ENST00000331563 PMF1-BGLAPU3KQ54 211 aa17.97■□□□□ 0.47
PKP3-201ENST00000331563 G3V2T6 193 aa17.97■□□□□ 0.47
PKP3-201ENST00000331563 GNGT2O14610 69 aa17.97■□□□□ 0.47
PKP3-201ENST00000331563 UPK1BO75841 260 aa17.97■□□□□ 0.47
PKP3-201ENST00000331563 GABARAPO95166 117 aa17.97■□□□□ 0.47
PKP3-201ENST00000331563 CD68P34810 354 aaPredicted RBP17.97■□□□□ 0.47
PKP3-201ENST00000331563 MTHFRP42898 656 aa17.97■□□□□ 0.47
PKP3-201ENST00000331563 CYHR1Q6ZMK1 362 aa17.97■□□□□ 0.47
PKP3-201ENST00000331563 LYSMD2Q8IV50 215 aa17.97■□□□□ 0.47
PKP3-201ENST00000331563 RHOXF1Q8NHV9 184 aa17.97■□□□□ 0.47
PKP3-201ENST00000331563 NDRG1Q92597 394 aaKnown RBP17.97■□□□□ 0.47
PKP3-201ENST00000331563 PEX13Q92968 403 aa17.97■□□□□ 0.47
PKP3-201ENST00000331563 ZMAT5Q9UDW3 170 aaKnown RBP17.97■□□□□ 0.47
PKP3-201ENST00000331563 XPNPEP2O43895 674 aa17.96■□□□□ 0.47
PKP3-201ENST00000331563 KCNK2O95069 426 aa17.96■□□□□ 0.47
PKP3-201ENST00000331563 HGFP14210 728 aa17.96■□□□□ 0.47
PKP3-201ENST00000331563 SLC1A2P43004 574 aa17.96■□□□□ 0.47
PKP3-201ENST00000331563 KCNK10P57789 538 aa17.96■□□□□ 0.47
PKP3-201ENST00000331563 TECRLQ5HYJ1 363 aa17.96■□□□□ 0.47
PKP3-201ENST00000331563 ESRP1Q6NXG1 681 aaKnown RBP17.96■□□□□ 0.47
PKP3-201ENST00000331563 OTOP3Q7RTS5 596 aa17.96■□□□□ 0.47
PKP3-201ENST00000331563 IFNL1Q8IU54 200 aa17.96■□□□□ 0.47
PKP3-201ENST00000331563 ZDHHC17Q8IUH5 632 aa17.96■□□□□ 0.47
PKP3-201ENST00000331563 MCFD2Q8NI22 146 aa17.96■□□□□ 0.47
PKP3-201ENST00000331563 MRPL45Q9BRJ2 306 aaKnown RBP17.96■□□□□ 0.47
PKP3-201ENST00000331563 TRIM54Q9BYV2 358 aa17.96■□□□□ 0.47
PKP3-201ENST00000331563 MAU2Q9Y6X3 613 aa17.96■□□□□ 0.47
PKP3-201ENST00000331563 ERI2A8K979 691 aaKnown RBP17.96■□□□□ 0.47
PKP3-201ENST00000331563 HOXD8P13378 290 aaPredicted RBP17.96■□□□□ 0.47
PKP3-201ENST00000331563 CPB1P15086 417 aa17.96■□□□□ 0.47
PKP3-201ENST00000331563 NAGAP17050 411 aa17.96■□□□□ 0.47
PKP3-201ENST00000331563 FSHRP23945 695 aa17.96■□□□□ 0.47
PKP3-201ENST00000331563 DNAJB1P25685 340 aa17.96■□□□□ 0.47
PKP3-201ENST00000331563 EMX1Q04741 257 aaPredicted RBP17.96■□□□□ 0.47
PKP3-201ENST00000331563 INCA1Q0VD86 236 aa17.96■□□□□ 0.47
PKP3-201ENST00000331563 COLEC12Q5KU26 742 aa17.96■□□□□ 0.47
PKP3-201ENST00000331563 DESI1Q6ICB0 168 aa17.96■□□□□ 0.47
PKP3-201ENST00000331563 C17orf99Q6UX52 265 aa17.96■□□□□ 0.47
PKP3-201ENST00000331563 PDZD4Q76G19 769 aaPredicted RBP17.96■□□□□ 0.47
PKP3-201ENST00000331563 DCP1BQ8IZD4 617 aaKnown RBP17.96■□□□□ 0.47
PKP3-201ENST00000331563 PAPD5Q8NDF8 572 aaKnown RBP17.96■□□□□ 0.47
PKP3-201ENST00000331563 BRSK1Q8TDC3 778 aa17.96■□□□□ 0.47
PKP3-201ENST00000331563 MAP6Q96JE9 813 aa17.96■□□□□ 0.47
PKP3-201ENST00000331563 ZNF560Q96MR9 790 aa17.96■□□□□ 0.47
PKP3-201ENST00000331563 ASB7Q9H672 318 aa17.96■□□□□ 0.47
PKP3-201ENST00000331563 PLEKHA5Q9HAU0 1116 aa17.96■□□□□ 0.47
PKP3-201ENST00000331563 NTN4Q9HB63 628 aa17.96■□□□□ 0.47
PKP3-201ENST00000331563 NECTIN3Q9NQS3 549 aa17.96■□□□□ 0.47
PKP3-201ENST00000331563 IGSF5Q9NSI5 407 aa17.96■□□□□ 0.47
PKP3-201ENST00000331563 RCOR3Q9P2K3 495 aaPredicted RBP17.96■□□□□ 0.47
PKP3-201ENST00000331563 NME7Q9Y5B8 376 aa17.96■□□□□ 0.47
PKP3-201ENST00000331563 COL1A2P08123 1366 aa17.96■□□□□ 0.47
PKP3-201ENST00000331563 SLC1A7O00341 560 aa17.95■□□□□ 0.46
PKP3-201ENST00000331563 PIP5K1BO14986 540 aa17.95■□□□□ 0.46
PKP3-201ENST00000331563 RECQL4O94761 1208 aa17.95■□□□□ 0.46
PKP3-201ENST00000331563 GLULP15104 373 aa17.95■□□□□ 0.46
PKP3-201ENST00000331563 PIGAP37287 484 aa17.95■□□□□ 0.46
PKP3-201ENST00000331563 GABARAPL2P60520 117 aa17.95■□□□□ 0.46
PKP3-201ENST00000331563 CDK10Q15131 360 aa17.95■□□□□ 0.46
PKP3-201ENST00000331563 RBM20Q5T481 1227 aaKnown RBP17.95■□□□□ 0.46
PKP3-201ENST00000331563 STEAP3Q658P3 488 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms