RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 DUSP16Q9BY84 665 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 CRNNQ9UBG3 495 aaPredicted RBP10.48□□□□□ -0.73
CLN8-201ENST00000331222 PLAGL1Q9UM63 463 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 MYH2Q9UKX2 1941 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.48□□□□□ -0.73
CLN8-201ENST00000331222 KERAO60938 352 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 ITGB1P05556 798 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 ANPEPP15144 967 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 ADSSP30520 456 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 WNT3AP56704 352 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 RGS8P57771 180 aaPredicted RBP10.48□□□□□ -0.73
CLN8-201ENST00000331222 CCINQ13939 588 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 TMEM119Q4V9L6 283 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 C4orf46Q504U0 113 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 FBXO22Q8NEZ5 403 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 OR7D4Q8NG98 312 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 S100ZQ8WXG8 99 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 PHF12Q96QT6 1004 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 ZNF184Q99676 751 aaPredicted RBP10.48□□□□□ -0.73
CLN8-201ENST00000331222 DUSP9Q99956 384 aaKnown RBP10.48□□□□□ -0.73
CLN8-201ENST00000331222 WDR55Q9H6Y2 383 aaPredicted RBP10.48□□□□□ -0.73
CLN8-201ENST00000331222 FRMPD4Q14CM0 1322 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 AZIN1O14977 448 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 CYB5AP00167 134 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 ASGR1P07306 291 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 GNSP15586 552 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 CHN2P52757 468 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 TSPAN5P62079 268 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 GANABQ14697 944 aaKnown RBP10.48□□□□□ -0.73
CLN8-201ENST00000331222 SPIN3Q5JUX0 258 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 CLP1Q92989 425 aaKnown RBP10.48□□□□□ -0.73
CLN8-201ENST00000331222 WDR77Q9BQA1 342 aaPredicted RBP10.48□□□□□ -0.73
CLN8-201ENST00000331222 TAPBPLQ9BX59 468 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 UCKL1Q9NWZ5 548 aa10.48□□□□□ -0.73
CLN8-201ENST00000331222 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.48□□□□□ -0.73
CLN8-201ENST00000331222 GPR89AB7ZAQ6 455 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 H7C0S8 307 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 GPR89BP0CG08 455 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 PPP3R1P63098 170 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 PDK3Q15120 406 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 TIMM50Q3ZCQ8 353 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 LPCAT4Q643R3 524 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 DEPDC4Q8N2C3 294 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 FBXW8Q8N3Y1 598 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 ZBTB2Q8N680 514 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 NXNL1Q96CM4 212 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 MFSD14AQ96MC6 490 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 GRIP1Q9Y3R0 1128 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 TESMINQ9Y4I5 508 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 MYOCOSA0A1B0GUC4 107 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 AP5Z1O43299 807 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 ALPPL2P10696 532 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 CLEC12AQ5QGZ9 265 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 ADAMTSL2Q86TH1 951 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 MAP4K3Q8IVH8 894 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 LIX1Q8N485 282 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 FAM13CQ8NE31 585 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 PIWIL2Q8TC59 973 aaKnown RBP10.47□□□□□ -0.73
CLN8-201ENST00000331222 BRF2Q9HAW0 419 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 SMURF1Q9HCE7 757 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 CES1P23141 567 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 CAPGP40121 348 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 SIM2Q14190 667 aaPredicted RBP10.47□□□□□ -0.73
CLN8-201ENST00000331222 TIGD2Q4W5G0 525 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 CHADLQ6NUI6 762 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 CAMK1DQ8IU85 385 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 PYROXD2Q8N2H3 581 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 ARL10Q8N8L6 244 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 TTC29Q8NA56 475 aaPredicted RBP10.47□□□□□ -0.73
CLN8-201ENST00000331222 OR2AJ1Q8NGZ0 328 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 HCAR2Q8TDS4 363 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 MGAT4AQ9UM21 535 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 TBX1O43435 398 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 PRAMEF1O95521 474 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 S100A6P06703 90 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 PSEN1P49768 467 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 SMIM11AP58511 58 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 FOLH1Q04609 750 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 NOGQ13253 232 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 VWA5B1Q5TIE3 1220 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 METTL3Q86U44 580 aaKnown RBP10.47□□□□□ -0.73
CLN8-201ENST00000331222 ZNF598Q86UK7 904 aaKnown RBP10.47□□□□□ -0.73
CLN8-201ENST00000331222 UPF1Q92900 1129 aaKnown RBP eCLIP10.47□□□□□ -0.731e-6■■■□□ 18.5
CLN8-201ENST00000331222 VAT1Q99536 393 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 GPR21Q99679 349 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 LRTM1Q9HBL6 345 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 ING4Q9UNL4 249 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.47□□□□□ -0.73
CLN8-201ENST00000331222 NCOA3Q9Y6Q9 1424 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 ARL5CA6NH57 179 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 LRIG2O94898 1065 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 ZNF823P16415 610 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 SULT2A1Q06520 285 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 DLK2Q6UY11 383 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 LINGO2Q7L985 606 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 ELOA2Q8IYF1 753 aaPredicted RBP10.47□□□□□ -0.73
CLN8-201ENST00000331222 DNAAF1Q8NEP3 725 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 GPR151Q8TDV0 419 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 ABHD5Q8WTS1 349 aa10.47□□□□□ -0.73
CLN8-201ENST00000331222 SLCO1B3Q9NPD5 702 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms