RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 CDRT15L2A8MXV6 281 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 D6RAR5 112 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 APOC4-APOC2K7ER74 178 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 RRP8O43159 456 aaKnown RBP6.28□□□□□ -1.4
SMG1-201ENST00000330588 NOBOXO60393 691 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 PPFIA2O75334 1257 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 CSO75390 466 aaKnown RBP6.28□□□□□ -1.4
SMG1-201ENST00000330588 NDST3O95803 873 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 JCHAINP01591 159 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 APOC2P02655 101 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 PRKCGP05129 697 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 GSTP1P09211 210 aaKnown RBP6.28□□□□□ -1.4
SMG1-201ENST00000330588 SLC2A4P14672 509 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 CTNNA2P26232 953 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 EIF2S3P41091 472 aaKnown RBP6.28□□□□□ -1.4
SMG1-201ENST00000330588 ETV3P41162 512 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 GPR1P46091 355 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 SPINT3P49223 89 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 UCNP55089 124 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 RPS26P62854 115 aaKnown RBP6.28□□□□□ -1.4
SMG1-201ENST00000330588 CYP4F3Q08477 520 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 ITKQ08881 620 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 ZBTB17Q13105 803 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 SPIDRQ14159 915 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 IHHQ14623 411 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 RAET1GQ6H3X3 334 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 MFSD7Q6UXD7 560 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 TAF8Q7Z7C8 310 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 TSPAN33Q86UF1 283 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 RFX6Q8HWS3 928 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 LSM14AQ8ND56 463 aaKnown RBP6.28□□□□□ -1.4
SMG1-201ENST00000330588 WDR36Q8NI36 951 aaKnown RBP6.28□□□□□ -1.4
SMG1-201ENST00000330588 MDM1Q8TC05 714 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 P3H4Q92791 437 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 TSACCQ96A04 125 aaPredicted RBP6.28□□□□□ -1.4
SMG1-201ENST00000330588 AP2M1Q96CW1 435 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 PLEKHG4BQ96PX9 1271 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 OR2M4Q96R27 311 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 FCRL5Q96RD9 977 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 LGMNQ99538 433 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 CCDC3Q9BQI4 270 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 FERMT1Q9BQL6 677 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 ZSCAN5AQ9BUG6 496 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 LGR4Q9BXB1 951 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 DPH1Q9BZG8 443 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 STRADBQ9C0K7 418 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 GLOD4Q9HC38 313 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 THSD1Q9NS62 852 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 HACD3Q9P035 362 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 FEZ2Q9UHY8 353 aaPredicted RBP6.28□□□□□ -1.4
SMG1-201ENST00000330588 CHKBQ9Y259 395 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.28□□□□□ -1.4
SMG1-201ENST00000330588 PCDHA3Q9Y5H8 950 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 HEY1Q9Y5J3 304 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 ENTPD2Q9Y5L3 495 aa6.28□□□□□ -1.4
SMG1-201ENST00000330588 C1orf232A0A0U1RR37 186 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 LOC285095A0A1B0GVY8 99 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 KLHL33A6NCF5 533 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 OR5K4A6NMS3 321 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 MIF4GDA9UHW6 222 aaKnown RBP6.27□□□□□ -1.41
SMG1-201ENST00000330588 KCNK1O00180 336 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 CST8O60676 142 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 KCNJ13O60928 360 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 ITGA2BP08514 1039 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 HLA-DPA1P20036 260 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 RAB6AP20340 208 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 PTPN3P26045 913 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 ARNTP27540 789 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 CETN2P41208 172 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 CD86P42081 329 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 NOP2P46087 812 aaKnown RBP6.27□□□□□ -1.41
SMG1-201ENST00000330588 FASLGP48023 281 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 VAV2P52735 878 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 CDK18Q07002 472 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 ZFP36L1Q07352 338 aaKnown RBP6.27□□□□□ -1.41
SMG1-201ENST00000330588 AP1B1Q10567 949 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 MPP3Q13368 585 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 C1orf61Q13536 156 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 TRA2AQ13595 282 aaKnown RBP eCLIP6.27□□□□□ -1.41
SMG1-201ENST00000330588 NOMO1Q15155 1222 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 PYCR3Q53H96 274 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 CCDC157Q569K6 752 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 CCDC70Q6NSX1 233 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 KDM7AQ6ZMT4 941 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 TMC3Q7Z5M5 1100 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 SPRED1Q7Z699 444 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 NRROSQ86YC3 692 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 KLHDC8BQ8IXV7 354 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 SYCE1Q8N0S2 351 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 TRAM1L1Q8N609 369 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 ZNF248Q8NDW4 579 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 LPCAT1Q8NF37 534 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 SNRNP27Q8WVK2 155 aaKnown RBP6.27□□□□□ -1.41
SMG1-201ENST00000330588 QKIQ96PU8 341 aaKnown RBP eCLIP6.27□□□□□ -1.41
SMG1-201ENST00000330588 VPS35Q96QK1 796 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 GFM1Q96RP9 751 aaKnown RBP6.27□□□□□ -1.41
SMG1-201ENST00000330588 WDR24Q96S15 920 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 HERPUD2Q9BSE4 406 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 TMEM168Q9H0V1 697 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 CARD9Q9H257 536 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms