RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 FNDC5Q8NAU1 212 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 SIDT2Q8NBJ9 832 aaKnown RBP15.2■□□□□ 0.02
BRCC3-201ENST00000330045 LZICQ8WZA0 190 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 BIRC7Q96CA5 298 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 PLEKHG4BQ96PX9 1271 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 PSKH2Q96QS6 385 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 SEPHS2Q99611 448 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 MAGEH1Q9H213 219 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 PIF1Q9H611 641 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 RPF2Q9H7B2 306 aaKnown RBP15.2■□□□□ 0.02
BRCC3-201ENST00000330045 CCSER2Q9H7U1 834 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 USP22Q9UPT9 525 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 VPS9D1Q9Y2B5 631 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 DYTNA2CJ06 578 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 INSIG1O15503 277 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 SYNCRIPO60506 623 aaKnown RBP15.2■□□□□ 0.02
BRCC3-201ENST00000330045 OR4F21O95013 312 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 TSPAN12O95859 305 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 NPPAP01160 153 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 ENO2P09104 434 aaPredicted RBP15.2■□□□□ 0.02
BRCC3-201ENST00000330045 VARSP26640 1264 aaKnown RBP15.2■□□□□ 0.02
BRCC3-201ENST00000330045 KCNQ1P51787 676 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 HK3P52790 923 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 CTBSQ01459 385 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 TBC1D25Q3MII6 688 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 GPSM1Q86YR5 675 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 EGFL6Q8IUX8 553 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 PROKR1Q8TCW9 393 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 EEF1AKMT1Q8WVE0 214 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 EXOC2Q96KP1 924 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 SPON2Q9BUD6 331 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 SEZ6LQ9BYH1 1024 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 CD274Q9NZQ7 290 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 UBA2Q9UBT2 640 aaPredicted RBP15.2■□□□□ 0.02
BRCC3-201ENST00000330045 TRMT6Q9UJA5 497 aaKnown RBP15.2■□□□□ 0.02
BRCC3-201ENST00000330045 CDC14AQ9UNH5 594 aa15.2■□□□□ 0.02
BRCC3-201ENST00000330045 ARIH1Q9Y4X5 557 aaPredicted RBP15.2■□□□□ 0.02
BRCC3-201ENST00000330045 E2F3O00716 465 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 NIPSNAP2O75323 286 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 EOMESO95936 686 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 MT-ND1P03886 318 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 HRH2P25021 359 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 STT3AP46977 705 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 GATMP50440 423 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 IL2P60568 153 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 PSAPL1Q6NUJ1 521 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 PIANPQ8IYJ0 282 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 CDYL2Q8N8U2 506 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 SLAIN1Q8ND83 568 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 OSCP1Q8WVF1 389 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 LINGO1Q96FE5 620 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 VPS50Q96JG6 964 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 SMIM14Q96QK8 99 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 ZBED2Q9BTP6 218 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 CHID1Q9BWS9 393 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 LRRC3Q9BY71 257 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.19■□□□□ 0.02
BRCC3-201ENST00000330045 HIPK3Q9H422 1215 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 CXorf21Q9HAI6 301 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 EIF2B4Q9UI10 523 aaKnown RBP15.19■□□□□ 0.02
BRCC3-201ENST00000330045 ASB1Q9Y576 335 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 GMEB1Q9Y692 573 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 V9GYQ6 96 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 FRMPD3Q5JV73 1810 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 VWA8A3KMH1 1905 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 SYN3O14994 580 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 PFDN6O15212 129 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 OR1I1O60431 355 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 TLR5O60602 858 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 SNAP29O95721 258 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 PRLP01236 227 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 LPOP22079 712 aaPredicted RBP15.19■□□□□ 0.02
BRCC3-201ENST00000330045 TTPAP49638 278 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 PRKG2Q13237 762 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 PMS2P3Q13401 168 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 ATP6AP1LQ52LC2 224 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 ZFAND4Q86XD8 727 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 HID1Q8IV36 788 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 DCBLD1Q8N8Z6 715 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 SLC43A3Q8NBI5 491 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 RNF145Q96MT1 663 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 FAM193BQ96PV7 902 aaPredicted RBP15.19■□□□□ 0.02
BRCC3-201ENST00000330045 SEPT5Q99719 369 aaPredicted RBP15.19■□□□□ 0.02
BRCC3-201ENST00000330045 BDH2Q9BUT1 245 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 OSBPL6Q9BZF3 934 aa15.19■□□□□ 0.02
BRCC3-201ENST00000330045 ARVCFO00192 962 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 NBNO60934 754 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 PSMA3P25788 255 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 SLC6A4P31645 630 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 MC4RP32245 332 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 TTKP33981 857 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 KPNA1P52294 538 aaPredicted RBP15.18■□□□□ 0.02
BRCC3-201ENST00000330045 OR4D2P58180 307 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 MTA1Q13330 715 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 MYBPC3Q14896 1274 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 FXNQ16595 210 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 CTSL3PQ5NE16 218 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 GLYATQ6IB77 296 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 SLC2A7Q6PXP3 512 aa15.18■□□□□ 0.02
BRCC3-201ENST00000330045 Q6ZSR9 355 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms