RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 DUS3LQ96G46 650 aaKnown RBP13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 PLEKHG4BQ96PX9 1271 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 TDRD1Q9BXT4 1180 aaKnown RBP13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 PADI4Q9UM07 663 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 TMEM88BA6NKF7 163 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 H7C4K7 107 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 PFDN6O15212 129 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 IGLV3-27P01718 113 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 CORO1AP31146 461 aaKnown RBP13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 SLC11A1P49279 550 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 ELAVL2Q12926 359 aaKnown RBP13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 USP41Q3LFD5 358 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 LETMD1Q6P1Q0 360 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 FUT10Q6P4F1 479 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 PEX13Q92968 403 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 TM6SF2Q9BZW4 377 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 RPF2Q9H7B2 306 aaKnown RBP13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 EBF1Q9UH73 591 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 A0A087WXM4 84 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 ANKRD66B4E2M5 251 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 DLGAP1O14490 977 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 PFDN1O60925 122 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 SNAP29O95721 258 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 TM4SF4P48230 202 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 TTPAP49638 278 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 RCAN2Q14206 197 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 TGFBIQ15582 683 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 NEDD8Q15843 81 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 CTSL3PQ5NE16 218 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 SPOUT1Q5T280 376 aaKnown RBP13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 ATXN7L2Q5T6C5 722 aaPredicted RBP13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 PTRHD1Q6GMV3 140 aaKnown RBP13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 BIRC7Q96CA5 298 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 CCDC97Q96F63 343 aaPredicted RBP13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 EGFL8Q99944 293 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 CHID1Q9BWS9 393 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 TRIM54Q9BYV2 358 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 HACD3Q9P035 362 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 HSFX1Q9UBD0 423 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 CDC14AQ9UNH5 594 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 SLC30A1Q9Y6M5 507 aa13.89□□□□□ -0.19
ATP2C1-201ENST00000328560 KLKB1P03952 638 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 ALPIP09923 528 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 G6PDP11413 515 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 ATF6P18850 670 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 CST5P28325 142 aaPredicted RBP13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 CCT8P50990 548 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 ERVK-8P63133 956 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 RING1Q06587 406 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 PRKG2Q13237 762 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 GPR17Q13304 367 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 FAM26DQ5JW98 314 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 GLYATQ6IB77 296 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 FAM126BQ8IXS8 530 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 CARNMT1Q8N4J0 409 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 TMEM199Q8N511 208 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 CD200R1Q8TD46 325 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 NSMCE2Q96MF7 247 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 PFDN4Q9NQP4 134 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 RHBDL2Q9NX52 303 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 POLR3HQ9Y535 204 aaPredicted RBP13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 DOCK4Q8N1I0 1966 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 MOXD2PA6NHM9 499 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 TBKBP1A7MCY6 615 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 H0Y626 953 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 TRIM16O95361 564 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 PRAMEF12O95522 483 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 IGHA2P01877 340 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 HMOX2P30519 316 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 GDF5P43026 501 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 SEMG2Q02383 582 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 TRAF2Q12933 501 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 TMTC4Q5T4D3 741 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 FAM151BQ6UXP7 276 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 LRRC8DQ7L1W4 858 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 CLDN19Q8N6F1 224 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 ADGRE3Q9BY15 652 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 IL37Q9NZH6 218 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 FAF1Q9UNN5 650 aaPredicted RBP13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 ANGPTL3Q9Y5C1 460 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 MAGED1Q9Y5V3 778 aaPredicted RBP13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 HTTP42858 3142 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 NLRC5Q86WI3 1866 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 PTPRDP23468 1912 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 TMEM189-UBE2V1I3L0A0 370 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 VNN2O95498 520 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 GPIP06744 558 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 SLC2A4P14672 509 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 RPS9P46781 194 aaKnown RBP13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 STT3AP46977 705 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 HSPA7P48741 367 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 CDK9P50750 372 aaKnown RBP13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 CDH4P55283 916 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 PPP1R8Q12972 351 aaKnown RBP13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 SELPLGQ14242 412 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 GPR107Q5VW38 600 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 SFRP1Q8N474 314 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 PROKR1Q8TCW9 393 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 POLR1BQ9H9Y6 1135 aa13.88□□□□□ -0.19
ATP2C1-201ENST00000328560 FCF1Q9Y324 198 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms