RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 MBD1Q9UIS9 605 aaPredicted RBP10.11□□□□□ -0.79
VIPAS39-201ENST00000327028 IQCF5A8MTL0 148 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 FPGTO14772 594 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 TM9SF1O15321 606 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 MAGEC1O60732 1142 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 NDUFS2O75306 463 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 FSBPO95073 299 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 ZWINTO95229 277 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 FTH1P02794 183 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 HOXC4P09017 264 aaPredicted RBP10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 RPA3P35244 121 aaPredicted RBP10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 CCT5P48643 541 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 KIAA1024LP59773 190 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 GTF2H3Q13889 308 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 MPP2Q14168 576 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 TSNAXIP1Q2TAA8 658 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 USP39Q53GS9 565 aaKnown RBP10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 TMEM207Q6UWW9 146 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 SLC36A4Q6YBV0 504 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 CDHR3Q6ZTQ4 885 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 FRMD1Q8N878 549 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 SIDT2Q8NBJ9 832 aaKnown RBP10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 KCTD4Q8WVF5 259 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 FUBP1Q96AE4 644 aaKnown RBP10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 FAM136AQ96C01 138 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 ZNF514Q96K75 400 aaPredicted RBP10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 UBXN10Q96LJ8 280 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 TSNARE1Q96NA8 513 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 SLC30A3Q99726 388 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 MYOCQ99972 504 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 IQCGQ9H095 443 aaKnown RBP10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 OR2AG1Q9H205 316 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 SYTL2Q9HCH5 934 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 LATS2Q9NRM7 1088 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 SPATS2LQ9NUQ6 558 aaKnown RBP10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 GALPQ9UBC7 116 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 DHRS7Q9Y394 339 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 OR1A2Q9Y585 309 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 PRAMEF26H0Y7S4 382 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 TOR1BO14657 336 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 LAMTOR5O43504 91 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 CDK14O94921 469 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 KLHL2O95198 593 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 TRIM16O95361 564 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 TOP3BO95985 862 aaKnown RBP10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 GMPRP36959 345 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 CTSCP53634 463 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 DMWDQ09019 674 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 GCNT7Q6ZNI0 430 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 PLD6Q8N2A8 252 aaKnown RBP10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 ZBTB2Q8N680 514 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 TMEM145Q8NBT3 493 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 CADM4Q8NFZ8 388 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 TCP10LQ8TDR4 215 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 DENND1AQ8TEH3 1009 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 INPP5DQ92835 1189 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 FOXJ1Q92949 421 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 BIRC7Q96CA5 298 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 SGF29Q96ES7 293 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 APOOQ9BUR5 198 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 LGR4Q9BXB1 951 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 EBF2Q9HAK2 575 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 SARS2Q9NP81 518 aaKnown RBP10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 IGSF5Q9NSI5 407 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 NKIRAS1Q9NYS0 192 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 GRID1Q9ULK0 1009 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 PLLPQ9Y342 182 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 HS3ST3A1Q9Y663 406 aa10.1□□□□□ -0.79
VIPAS39-201ENST00000327028 OR2AG2A6NM03 316 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 GPR89AB7ZAQ6 455 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 CACNB4O00305 520 aaPredicted RBP10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 LTA4HP09960 611 aaKnown RBP10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 GPR89BP0CG08 455 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 ZNF8P17098 575 aaPredicted RBP10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 ITGB6P18564 788 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 KPNA2P52292 529 aaKnown RBP10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 TTLL9Q3SXZ7 439 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 DOK6Q6PKX4 331 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 PAQR3Q6TCH7 311 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 KYAT3Q6YP21 454 aaKnown RBP10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 WDR5BQ86VZ2 330 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 NKAPQ8N5F7 415 aaKnown RBP10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 ANKRD42Q8N9B4 389 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 ANKRD49Q8WVL7 239 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 SLC17A7Q9P2U7 560 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 METTL12A8MUP2 240 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 POLR3GO15318 223 aaPredicted RBP10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 LILRB5O75023 590 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 DNAJC6O75061 913 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 ASMTLO95671 621 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 GSTM1P09488 218 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 CCDC166P0CW27 439 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 CHN1P15882 459 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 ATP1A2P50993 1020 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 CLDN2P57739 230 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 PFN3P60673 137 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 GSTM4Q03013 218 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 DLG1Q12959 904 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 FAM83EQ2M2I3 478 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms