RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 ZNF366Q8N895 744 aa17.61■□□□□ 0.41
RAB39A-201ENST00000320578 DDHD1Q8NEL9 900 aa17.61■□□□□ 0.41
RAB39A-201ENST00000320578 RAB7BQ96AH8 199 aa17.61■□□□□ 0.41
RAB39A-201ENST00000320578 ARRDC3Q96B67 414 aa17.61■□□□□ 0.41
RAB39A-201ENST00000320578 CCDC97Q96F63 343 aaPredicted RBP17.61■□□□□ 0.41
RAB39A-201ENST00000320578 COQ10AQ96MF6 247 aa17.61■□□□□ 0.41
RAB39A-201ENST00000320578 HDAC8Q9BY41 377 aa17.61■□□□□ 0.41
RAB39A-201ENST00000320578 KPNA5O15131 536 aa17.61■□□□□ 0.41
RAB39A-201ENST00000320578 ELFN1P0C7U0 828 aa17.61■□□□□ 0.41
RAB39A-201ENST00000320578 HLA-EP13747 358 aa17.61■□□□□ 0.41
RAB39A-201ENST00000320578 ATP1B2P14415 290 aaPredicted RBP17.61■□□□□ 0.41
RAB39A-201ENST00000320578 TNFRSF4P43489 277 aa17.61■□□□□ 0.41
RAB39A-201ENST00000320578 DLX2Q07687 328 aaPredicted RBP17.61■□□□□ 0.41
RAB39A-201ENST00000320578 GBX1Q14549 363 aa17.61■□□□□ 0.41
RAB39A-201ENST00000320578 TMEM52BQ4KMG9 183 aa17.61■□□□□ 0.41
RAB39A-201ENST00000320578 LDLRAP1Q5SW96 308 aa17.61■□□□□ 0.41
RAB39A-201ENST00000320578 VWA5B1Q5TIE3 1220 aa17.61■□□□□ 0.41
RAB39A-201ENST00000320578 METTL2BQ6P1Q9 378 aaKnown RBP17.61■□□□□ 0.41
RAB39A-201ENST00000320578 LKAAEAR1Q8TD35 194 aa17.61■□□□□ 0.41
RAB39A-201ENST00000320578 PRR11Q96HE9 360 aaPredicted RBP17.61■□□□□ 0.41
RAB39A-201ENST00000320578 TAGLN3Q9UI15 199 aa17.61■□□□□ 0.41
RAB39A-201ENST00000320578 HCN2Q9UL51 889 aa17.61■□□□□ 0.41
RAB39A-201ENST00000320578 CDYLQ9Y232 598 aa17.61■□□□□ 0.41
RAB39A-201ENST00000320578 ANHXE9PGG2 379 aa17.6■□□□□ 0.41
RAB39A-201ENST00000320578 WNT9AO14904 365 aa17.6■□□□□ 0.41
RAB39A-201ENST00000320578 RASSF9O75901 435 aa17.6■□□□□ 0.41
RAB39A-201ENST00000320578 TRIM16O95361 564 aa17.6■□□□□ 0.41
RAB39A-201ENST00000320578 ESRRAP11474 423 aaPredicted RBP17.6■□□□□ 0.41
RAB39A-201ENST00000320578 PRDX6P30041 224 aa17.6■□□□□ 0.41
RAB39A-201ENST00000320578 LTBRP36941 435 aa17.6■□□□□ 0.41
RAB39A-201ENST00000320578 ETV3P41162 512 aa17.6■□□□□ 0.41
RAB39A-201ENST00000320578 IL12RB1P42701 662 aa17.6■□□□□ 0.41
RAB39A-201ENST00000320578 TGFBIQ15582 683 aa17.6■□□□□ 0.41
RAB39A-201ENST00000320578 CDKL4Q5MAI5 379 aa17.6■□□□□ 0.41
RAB39A-201ENST00000320578 COL13A1Q5TAT6 717 aaPredicted RBP17.6■□□□□ 0.41
RAB39A-201ENST00000320578 FAM46CQ5VWP2 391 aa17.6■□□□□ 0.41
RAB39A-201ENST00000320578 CYHR1Q6ZMK1 362 aa17.6■□□□□ 0.41
RAB39A-201ENST00000320578 CLYBLQ8N0X4 340 aa17.6■□□□□ 0.41
RAB39A-201ENST00000320578 ACTRT2Q8TDY3 377 aa17.6■□□□□ 0.41
RAB39A-201ENST00000320578 BTN2A2Q8WVV5 523 aa17.6■□□□□ 0.41
RAB39A-201ENST00000320578 DCUN1D1Q96GG9 259 aa17.6■□□□□ 0.41
RAB39A-201ENST00000320578 RAB3IPQ96QF0 476 aaPredicted RBP17.6■□□□□ 0.41
RAB39A-201ENST00000320578 ABCG8Q9H221 673 aa17.6■□□□□ 0.41
RAB39A-201ENST00000320578 MEAF6Q9HAF1 191 aa17.6■□□□□ 0.41
RAB39A-201ENST00000320578 RDH14Q9HBH5 336 aa17.6■□□□□ 0.41
RAB39A-201ENST00000320578 PRSS16Q9NQE7 514 aa17.6■□□□□ 0.41
RAB39A-201ENST00000320578 ACSS2Q9NR19 701 aa17.6■□□□□ 0.41
RAB39A-201ENST00000320578 CLDND1Q9NY35 253 aa17.6■□□□□ 0.41
RAB39A-201ENST00000320578 TRAF6Q9Y4K3 522 aa17.6■□□□□ 0.41
RAB39A-201ENST00000320578 TNPO3Q9Y5L0 923 aaKnown RBP17.6■□□□□ 0.41
RAB39A-201ENST00000320578 TMEM265A0A087WTH1 108 aa17.59■□□□□ 0.41
RAB39A-201ENST00000320578 SPINT1O43278 529 aa17.59■□□□□ 0.41
RAB39A-201ENST00000320578 LCP2Q13094 533 aa17.59■□□□□ 0.41
RAB39A-201ENST00000320578 PLEKHS1Q5SXH7 462 aa17.59■□□□□ 0.41
RAB39A-201ENST00000320578 FBXL19Q6PCT2 694 aa17.59■□□□□ 0.41
RAB39A-201ENST00000320578 SBSNQ6UWP8 590 aa17.59■□□□□ 0.41
RAB39A-201ENST00000320578 ERN2Q76MJ5 926 aaKnown RBP17.59■□□□□ 0.41
RAB39A-201ENST00000320578 TREML1Q86YW5 311 aa17.59■□□□□ 0.41
RAB39A-201ENST00000320578 HOMEZQ8IX15 550 aa17.59■□□□□ 0.41
RAB39A-201ENST00000320578 C10orf67Q8IYJ2 551 aa17.59■□□□□ 0.41
RAB39A-201ENST00000320578 CPSF7Q8N684 471 aaKnown RBP17.59■□□□□ 0.41
RAB39A-201ENST00000320578 ZNF483Q8TF39 744 aaPredicted RBP17.59■□□□□ 0.41
RAB39A-201ENST00000320578 DTD2Q96FN9 168 aa17.59■□□□□ 0.41
RAB39A-201ENST00000320578 RIOK2Q9BVS4 552 aaKnown RBP17.59■□□□□ 0.41
RAB39A-201ENST00000320578 FAM126AQ9BYI3 521 aaPredicted RBP17.59■□□□□ 0.41
RAB39A-201ENST00000320578 PRO3102Q9H379 93 aa17.59■□□□□ 0.41
RAB39A-201ENST00000320578 SLC40A1Q9NP59 571 aa17.59■□□□□ 0.41
RAB39A-201ENST00000320578 DYRK4Q9NR20 520 aa17.59■□□□□ 0.41
RAB39A-201ENST00000320578 ARMCX1Q9P291 453 aa17.59■□□□□ 0.41
RAB39A-201ENST00000320578 OARD1Q9Y530 152 aa17.59■□□□□ 0.41
RAB39A-201ENST00000320578 UBFD1O14562 309 aaKnown RBP17.58■□□□□ 0.41
RAB39A-201ENST00000320578 RAD51BO15315 384 aa17.58■□□□□ 0.41
RAB39A-201ENST00000320578 SNX2O60749 519 aa17.58■□□□□ 0.41
RAB39A-201ENST00000320578 MLYCDO95822 493 aa17.58■□□□□ 0.41
RAB39A-201ENST00000320578 ADRB3P13945 408 aa17.58■□□□□ 0.41
RAB39A-201ENST00000320578 GM2AP17900 193 aa17.58■□□□□ 0.41
RAB39A-201ENST00000320578 AOAHP28039 575 aa17.58■□□□□ 0.41
RAB39A-201ENST00000320578 EEF1DP29692 281 aaKnown RBP17.58■□□□□ 0.41
RAB39A-201ENST00000320578 MNAT1P51948 309 aa17.58■□□□□ 0.41
RAB39A-201ENST00000320578 HK3P52790 923 aa17.58■□□□□ 0.41
RAB39A-201ENST00000320578 CLCQ05315 142 aa17.58■□□□□ 0.41
RAB39A-201ENST00000320578 CDC16Q13042 620 aa17.58■□□□□ 0.41
RAB39A-201ENST00000320578 GRIN2CQ14957 1233 aa17.58■□□□□ 0.41
RAB39A-201ENST00000320578 PCBP2Q15366 365 aaKnown RBP eCLIP17.58■□□□□ 0.41
RAB39A-201ENST00000320578 PPP1R3AQ16821 1122 aa17.58■□□□□ 0.41
RAB39A-201ENST00000320578 TTC23LQ6PF05 361 aa17.58■□□□□ 0.41
RAB39A-201ENST00000320578 SFTPA1Q8IWL2 248 aa17.58■□□□□ 0.41
RAB39A-201ENST00000320578 CHCHD4Q8N4Q1 142 aa17.58■□□□□ 0.41
RAB39A-201ENST00000320578 PDPRQ8NCN5 879 aa17.58■□□□□ 0.41
RAB39A-201ENST00000320578 SMRP1Q8NCR6 262 aa17.58■□□□□ 0.41
RAB39A-201ENST00000320578 AGR3Q8TD06 166 aa17.58■□□□□ 0.41
RAB39A-201ENST00000320578 EXT2Q93063 718 aa17.58■□□□□ 0.41
RAB39A-201ENST00000320578 SCAMP4Q969E2 229 aa17.58■□□□□ 0.41
RAB39A-201ENST00000320578 NUF2Q9BZD4 464 aa17.58■□□□□ 0.41
RAB39A-201ENST00000320578 CD84Q9UIB8 345 aa17.58■□□□□ 0.41
RAB39A-201ENST00000320578 MTCH2Q9Y6C9 303 aa17.58■□□□□ 0.41
RAB39A-201ENST00000320578 DENND4AQ7Z401 1863 aa17.58■□□□□ 0.41
RAB39A-201ENST00000320578 NUAK1O60285 661 aa17.58■□□□□ 0.4
RAB39A-201ENST00000320578 CDK14O94921 469 aa17.58■□□□□ 0.4
RAB39A-201ENST00000320578 MPC1LP0DKB6 136 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms