RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 CCR3P51677 355 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 PAGE2BQ5JRK9 111 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 EGFL6Q8IUX8 553 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 APLFQ8IW19 511 aaPredicted RBP16.31■□□□□ 0.2
CLIP4-201ENST00000320081 FAM9CQ8IZT9 166 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 PROX1Q92786 737 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 ABCB8Q9NUT2 735 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 COMMD3-BMI1R4GMX3 469 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 TRMUO75648 421 aaKnown RBP16.31■□□□□ 0.2
CLIP4-201ENST00000320081 NADKO95544 446 aaPredicted RBP16.31■□□□□ 0.2
CLIP4-201ENST00000320081 TRBC1P01850 177 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 PRKACGP22612 351 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 ARSDP51689 593 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 ACLYP53396 1101 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 PURAQ00577 322 aaKnown RBP16.31■□□□□ 0.2
CLIP4-201ENST00000320081 SPIBQ01892 262 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 ZNF789Q5FWF6 425 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 SLC2A7Q6PXP3 512 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 PLEKHM3Q6ZWE6 761 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 PHF10Q8WUB8 498 aaKnown RBP16.31■□□□□ 0.2
CLIP4-201ENST00000320081 NTAN1Q96AB6 310 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 SKA1Q96BD8 255 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 SLC47A1Q96FL8 570 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 NSUN3Q9H649 340 aaKnown RBP16.31■□□□□ 0.2
CLIP4-201ENST00000320081 GABRQQ9UN88 632 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 MYH1P12882 1939 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.31■□□□□ 0.2
CLIP4-201ENST00000320081 PIRO00625 290 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 FOXD2O60548 495 aaPredicted RBP16.31■□□□□ 0.2
CLIP4-201ENST00000320081 ECI2O75521 394 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 RPS9P46781 194 aaKnown RBP16.31■□□□□ 0.2
CLIP4-201ENST00000320081 CCR4P51679 360 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 INHBEP58166 350 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 GTF2H2Q13888 395 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 ADGRE1Q14246 886 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 ANGPT1Q15389 498 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 CGB2Q6NT52 195 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 GTF2H2CQ6P1K8 395 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 UBASH3BQ8TF42 649 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 AURKBQ96GD4 344 aaPredicted RBP16.31■□□□□ 0.2
CLIP4-201ENST00000320081 SLC45A3Q96JT2 553 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 CCDC28BQ9BUN5 200 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 ADI1Q9BV57 179 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 ZDHHC4Q9NPG8 344 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 OSER1Q9NX31 292 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 MARCH4Q9P2E8 410 aaPredicted RBP16.31■□□□□ 0.2
CLIP4-201ENST00000320081 FETUBQ9UGM5 382 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 A0A0U1RQF3 1178 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 PIPSLA2A3N6 862 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 TFECO14948 347 aaPredicted RBP16.31■□□□□ 0.2
CLIP4-201ENST00000320081 OR10H3O60404 316 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 SELPP16109 830 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 UFM1P61960 85 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 RSBN1Q5VWQ0 802 aaPredicted RBP16.31■□□□□ 0.2
CLIP4-201ENST00000320081 ARMC6Q6NXE6 501 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 AHSA2Q719I0 299 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 CFAP206Q8IYR0 622 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 XAGE5Q8WWM1 108 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 CXorf21Q9HAI6 301 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 SGK2Q9HBY8 427 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 GALNT8Q9NY28 637 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 SLC9A8Q9Y2E8 581 aa16.31■□□□□ 0.2
CLIP4-201ENST00000320081 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.31■□□□□ 0.2
CLIP4-201ENST00000320081 ARHGEF9O43307 516 aa16.3■□□□□ 0.2
CLIP4-201ENST00000320081 SEC24AO95486 1093 aa16.3■□□□□ 0.2
CLIP4-201ENST00000320081 OPN1SWP03999 348 aa16.3■□□□□ 0.2
CLIP4-201ENST00000320081 BNIP2Q12982 314 aa16.3■□□□□ 0.2
CLIP4-201ENST00000320081 TRNP1Q6NT89 227 aa16.3■□□□□ 0.2
CLIP4-201ENST00000320081 CMTM8Q8IZV2 173 aa16.3■□□□□ 0.2
CLIP4-201ENST00000320081 KBTBD7Q8WVZ9 684 aa16.3■□□□□ 0.2
CLIP4-201ENST00000320081 GPR22Q99680 433 aa16.3■□□□□ 0.2
CLIP4-201ENST00000320081 MCMBPQ9BTE3 642 aa16.3■□□□□ 0.2
CLIP4-201ENST00000320081 EIF2B3Q9NR50 452 aaKnown RBP16.3■□□□□ 0.2
CLIP4-201ENST00000320081 DNAJC13O75165 2243 aa16.3■□□□□ 0.2
CLIP4-201ENST00000320081 H3BSA7 217 aa16.3■□□□□ 0.2
CLIP4-201ENST00000320081 TRAF3Q13114 568 aa16.3■□□□□ 0.2
CLIP4-201ENST00000320081 TRIP4Q15650 581 aaPredicted RBP16.3■□□□□ 0.2
CLIP4-201ENST00000320081 NADK2Q4G0N4 442 aa16.3■□□□□ 0.2
CLIP4-201ENST00000320081 CWF19L1Q69YN2 538 aaKnown RBP16.3■□□□□ 0.2
CLIP4-201ENST00000320081 KLHL32Q96NJ5 620 aa16.3■□□□□ 0.2
CLIP4-201ENST00000320081 PDP1Q9P0J1 537 aaPredicted RBP16.3■□□□□ 0.2
CLIP4-201ENST00000320081 CFAP20Q9Y6A4 193 aaKnown RBP16.3■□□□□ 0.2
CLIP4-201ENST00000320081 SLC38A8A6NNN8 435 aa16.3■□□□□ 0.2
CLIP4-201ENST00000320081 CLDN7O95471 211 aa16.3■□□□□ 0.2
CLIP4-201ENST00000320081 CCNA2P20248 432 aa16.3■□□□□ 0.2
CLIP4-201ENST00000320081 CSKP41240 450 aa16.3■□□□□ 0.2
CLIP4-201ENST00000320081 NCF4Q15080 339 aa16.3■□□□□ 0.2
CLIP4-201ENST00000320081 FAM110BQ8TC76 370 aa16.3■□□□□ 0.2
CLIP4-201ENST00000320081 SMIM14Q96QK8 99 aa16.3■□□□□ 0.2
CLIP4-201ENST00000320081 HOPXQ9BPY8 73 aaPredicted RBP16.3■□□□□ 0.2
CLIP4-201ENST00000320081 MRPS26Q9BYN8 205 aaKnown RBP16.3■□□□□ 0.2
CLIP4-201ENST00000320081 RAD21L1Q9H4I0 556 aa16.3■□□□□ 0.2
CLIP4-201ENST00000320081 TESMINQ9Y4I5 508 aa16.3■□□□□ 0.2
CLIP4-201ENST00000320081 PSMD11O00231 422 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 T-ENOLP0DO92 83 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 CNPY1Q3B7I2 92 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 IRGQQ8WZA9 623 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 VMP1Q96GC9 406 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 CCDC3Q9BQI4 270 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 PTGESO14684 152 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms