RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 ZFYVE27Q5T4F4 411 aa13.98□□□□□ -0.17
RPP40-201ENST00000319533 ALS2CLQ60I27 953 aa13.98□□□□□ -0.17
RPP40-201ENST00000319533 SLC9A4Q6AI14 798 aa13.98□□□□□ -0.17
RPP40-201ENST00000319533 C11orf96Q7Z7L8 435 aa13.98□□□□□ -0.17
RPP40-201ENST00000319533 TRIM48Q8IWZ4 208 aa13.98□□□□□ -0.17
RPP40-201ENST00000319533 RHOT2Q8IXI1 618 aa13.98□□□□□ -0.17
RPP40-201ENST00000319533 GALNT6Q8NCL4 622 aa13.98□□□□□ -0.17
RPP40-201ENST00000319533 DTX3LQ8TDB6 740 aa13.98□□□□□ -0.17
RPP40-201ENST00000319533 RAPGEF5Q92565 580 aa13.98□□□□□ -0.17
RPP40-201ENST00000319533 MRFAP1L1Q96HT8 127 aa13.98□□□□□ -0.17
RPP40-201ENST00000319533 ZNF830Q96NB3 372 aaPredicted RBP13.98□□□□□ -0.17
RPP40-201ENST00000319533 VPS35Q96QK1 796 aa13.98□□□□□ -0.17
RPP40-201ENST00000319533 SRPK1Q96SB4 655 aaKnown RBP13.98□□□□□ -0.17
RPP40-201ENST00000319533 SLC25A51Q9H1U9 297 aa13.98□□□□□ -0.17
RPP40-201ENST00000319533 KCND3Q9UK17 655 aa13.98□□□□□ -0.17
RPP40-201ENST00000319533 SHOC2Q9UQ13 582 aa13.98□□□□□ -0.17
RPP40-201ENST00000319533 MAN2B2Q9Y2E5 1009 aa13.98□□□□□ -0.17
RPP40-201ENST00000319533 ZNF711Q9Y462 761 aa13.98□□□□□ -0.17
RPP40-201ENST00000319533 C3orf70A6NLC5 250 aaPredicted RBP13.97□□□□□ -0.17
RPP40-201ENST00000319533 MKRN2OSH3BPM6 223 aa13.97□□□□□ -0.17
RPP40-201ENST00000319533 K7EM74 188 aa13.97□□□□□ -0.17
RPP40-201ENST00000319533 KIF1CO43896 1103 aaKnown RBP13.97□□□□□ -0.17
RPP40-201ENST00000319533 SPAG6O75602 509 aa13.97□□□□□ -0.17
RPP40-201ENST00000319533 KIAA0754O94854 1291 aa13.97□□□□□ -0.17
RPP40-201ENST00000319533 NDUFA10O95299 355 aa13.97□□□□□ -0.17
RPP40-201ENST00000319533 AMD1P17707 334 aa13.97□□□□□ -0.17
RPP40-201ENST00000319533 SEPHS1P49903 392 aa13.97□□□□□ -0.17
RPP40-201ENST00000319533 CDK18Q07002 472 aa13.97□□□□□ -0.17
RPP40-201ENST00000319533 MESDQ14696 234 aa13.97□□□□□ -0.17
RPP40-201ENST00000319533 KHDC1Q4VXA5 237 aaKnown RBP13.97□□□□□ -0.17
RPP40-201ENST00000319533 CRTC3Q6UUV7 619 aa13.97□□□□□ -0.17
RPP40-201ENST00000319533 NT5DC3Q86UY8 548 aa13.97□□□□□ -0.17
RPP40-201ENST00000319533 APLFQ8IW19 511 aaPredicted RBP13.97□□□□□ -0.17
RPP40-201ENST00000319533 FAM26EQ8N5C1 309 aa13.97□□□□□ -0.17
RPP40-201ENST00000319533 TC2NQ8N9U0 490 aa13.97□□□□□ -0.17
RPP40-201ENST00000319533 SLC35G2Q8TBE7 412 aa13.97□□□□□ -0.17
RPP40-201ENST00000319533 RSC1A1Q92681 617 aa13.97□□□□□ -0.17
RPP40-201ENST00000319533 ZDHHC12Q96GR4 267 aa13.97□□□□□ -0.17
RPP40-201ENST00000319533 OLFM3Q96PB7 478 aa13.97□□□□□ -0.17
RPP40-201ENST00000319533 FCRL4Q96PJ5 515 aa13.97□□□□□ -0.17
RPP40-201ENST00000319533 PSMG3-AS1Q96PY0 264 aa13.97□□□□□ -0.17
RPP40-201ENST00000319533 LUC7LQ9NQ29 371 aaKnown RBP13.97□□□□□ -0.17
RPP40-201ENST00000319533 INTUQ9ULD6 942 aa13.97□□□□□ -0.17
RPP40-201ENST00000319533 POLHQ9Y253 713 aa13.97□□□□□ -0.17
RPP40-201ENST00000319533 PLAAQ9Y263 795 aa13.97□□□□□ -0.17
RPP40-201ENST00000319533 PDZK1P1A8MUH7 402 aa13.96□□□□□ -0.17
RPP40-201ENST00000319533 C21orf140B9A014 251 aa13.96□□□□□ -0.17
RPP40-201ENST00000319533 KCNJ13O60928 360 aa13.96□□□□□ -0.17
RPP40-201ENST00000319533 CDK14O94921 469 aa13.96□□□□□ -0.17
RPP40-201ENST00000319533 MT-ND3P03897 115 aa13.96□□□□□ -0.17
RPP40-201ENST00000319533 PIRTP0C851 137 aa13.96□□□□□ -0.17
RPP40-201ENST00000319533 NELFEP18615 380 aaKnown RBP13.96□□□□□ -0.17
RPP40-201ENST00000319533 IDSP22304 550 aa13.96□□□□□ -0.17
RPP40-201ENST00000319533 ARHGAP25P42331 645 aa13.96□□□□□ -0.17
RPP40-201ENST00000319533 PMS2P54278 862 aa13.96□□□□□ -0.17
RPP40-201ENST00000319533 ERV3-1Q14264 604 aa13.96□□□□□ -0.17
RPP40-201ENST00000319533 GPR18Q14330 331 aa13.96□□□□□ -0.17
RPP40-201ENST00000319533 SPA17Q15506 151 aa13.96□□□□□ -0.17
RPP40-201ENST00000319533 PLA2G4EQ3MJ16 856 aa13.96□□□□□ -0.17
RPP40-201ENST00000319533 CACHD1Q5VU97 1274 aa13.96□□□□□ -0.17
RPP40-201ENST00000319533 CYB5D1Q6P9G0 228 aa13.96□□□□□ -0.17
RPP40-201ENST00000319533 RASGRP3Q8IV61 690 aa13.96□□□□□ -0.17
RPP40-201ENST00000319533 STAMBPL1Q96FJ0 436 aa13.96□□□□□ -0.17
RPP40-201ENST00000319533 SLC41A2Q96JW4 573 aa13.96□□□□□ -0.17
RPP40-201ENST00000319533 GPR63Q9BZJ6 419 aa13.96□□□□□ -0.17
RPP40-201ENST00000319533 BRD8Q9H0E9 1235 aa13.96□□□□□ -0.17
RPP40-201ENST00000319533 PADI1Q9ULC6 663 aa13.96□□□□□ -0.17
RPP40-201ENST00000319533 DNAJC16Q9Y2G8 782 aa13.96□□□□□ -0.17
RPP40-201ENST00000319533 SPTAN1Q13813 2472 aaKnown RBP13.96□□□□□ -0.18
RPP40-201ENST00000319533 OR52A4PA6NMU1 304 aa13.95□□□□□ -0.18
RPP40-201ENST00000319533 MTX2O75431 263 aa13.95□□□□□ -0.18
RPP40-201ENST00000319533 CREG1O75629 220 aa13.95□□□□□ -0.18
RPP40-201ENST00000319533 RFPL1O75677 317 aa13.95□□□□□ -0.18
RPP40-201ENST00000319533 RASSF9O75901 435 aa13.95□□□□□ -0.18
RPP40-201ENST00000319533 NDST3O95803 873 aa13.95□□□□□ -0.18
RPP40-201ENST00000319533 CCNYL3P0C7X3 344 aa13.95□□□□□ -0.18
RPP40-201ENST00000319533 NR1D1P20393 614 aa13.95□□□□□ -0.18
RPP40-201ENST00000319533 RPL10P27635 214 aaKnown RBP13.95□□□□□ -0.18
RPP40-201ENST00000319533 CYLC1P35663 651 aaPredicted RBP13.95□□□□□ -0.18
RPP40-201ENST00000319533 MAGEA1P43355 309 aa13.95□□□□□ -0.18
RPP40-201ENST00000319533 DMPKQ09013 629 aa13.95□□□□□ -0.18
RPP40-201ENST00000319533 AP1B1Q10567 949 aa13.95□□□□□ -0.18
RPP40-201ENST00000319533 TMEM115Q12893 351 aaPredicted RBP13.95□□□□□ -0.18
RPP40-201ENST00000319533 DNASE1L3Q13609 305 aa13.95□□□□□ -0.18
RPP40-201ENST00000319533 PDK1Q15118 436 aa13.95□□□□□ -0.18
RPP40-201ENST00000319533 SEPT7Q16181 437 aaKnown RBP13.95□□□□□ -0.18
RPP40-201ENST00000319533 BPHLQ86WA6 291 aaPredicted RBP13.95□□□□□ -0.18
RPP40-201ENST00000319533 PPP1R3BQ86XI6 285 aa13.95□□□□□ -0.18
RPP40-201ENST00000319533 CCDC170Q8IYT3 715 aa13.95□□□□□ -0.18
RPP40-201ENST00000319533 BRSK1Q8TDC3 778 aa13.95□□□□□ -0.18
RPP40-201ENST00000319533 UBXN4Q92575 508 aa13.95□□□□□ -0.18
RPP40-201ENST00000319533 AGAP3Q96P47 875 aa13.95□□□□□ -0.18
RPP40-201ENST00000319533 CEP41Q9BYV8 373 aa13.95□□□□□ -0.18
RPP40-201ENST00000319533 GLOD4Q9HC38 313 aa13.95□□□□□ -0.18
RPP40-201ENST00000319533 LHX9Q9NQ69 397 aa13.95□□□□□ -0.18
RPP40-201ENST00000319533 TLK1Q9UKI8 766 aa13.95□□□□□ -0.18
RPP40-201ENST00000319533 WDR37Q9Y2I8 494 aa13.95□□□□□ -0.18
RPP40-201ENST00000319533 HEY1Q9Y5J3 304 aa13.95□□□□□ -0.18
RPP40-201ENST00000319533 SPO11Q9Y5K1 396 aa13.95□□□□□ -0.18
RPP40-201ENST00000319533 LRRD1A4D1F6 860 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms