RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 ACAP2Q15057 778 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 MARC1Q5VT66 337 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 ANKS6Q68DC2 871 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 ATG16L2Q8NAA4 619 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 OSCP1Q8WVF1 389 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 ZNF560Q96MR9 790 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 ALPK1Q96QP1 1244 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 TRMT13Q9NUP7 481 aaKnown RBP14.06□□□□□ -0.16
PABPC1-201ENST00000318607 KIF17Q9P2E2 1029 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 SLCO3A1Q9UIG8 710 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 ZNF112Q9UJU3 913 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 USP34Q70CQ2 3546 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 MKI67P46013 3256 aaKnown RBP14.06□□□□□ -0.16
PABPC1-201ENST00000318607 IGKV6-21A0A0C4DH24 114 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 CCDC162PA2VCL2 907 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 TREHO43280 583 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 ANGPTL1O95841 491 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 HLCSP50747 726 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 DAG1Q14118 895 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 RAP1GAP2Q684P5 730 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 TBC1D21Q8IYX1 336 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 OR8H2Q8N162 312 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 TSPAN17Q96FV3 270 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 HOPXQ9BPY8 73 aaPredicted RBP14.06□□□□□ -0.16
PABPC1-201ENST00000318607 MROH8Q9H579 483 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 AGO3Q9H9G7 860 aaKnown RBP14.06□□□□□ -0.16
PABPC1-201ENST00000318607 FAM32AQ9Y421 112 aaKnown RBP14.06□□□□□ -0.16
PABPC1-201ENST00000318607 NBNO60934 754 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 LCKP06239 509 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 DCKP27707 260 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 SCNN1GP51170 649 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 TAB1Q15750 504 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 CTU2Q2VPK5 515 aaKnown RBP14.06□□□□□ -0.16
PABPC1-201ENST00000318607 PLPPR4Q7Z2D5 763 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 SLC22A9Q8IVM8 553 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 DCP1BQ8IZD4 617 aaKnown RBP14.06□□□□□ -0.16
PABPC1-201ENST00000318607 DEPDC4Q8N2C3 294 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 SIDT2Q8NBJ9 832 aaKnown RBP14.06□□□□□ -0.16
PABPC1-201ENST00000318607 OR6J1Q8NGC5 347 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 MCFD2Q8NI22 146 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 RAB2BQ8WUD1 216 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 SLC35B4Q969S0 331 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 TMEM125Q96AQ2 219 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 TPD52L3Q96J77 140 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 SNX27Q96L92 541 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 NECTIN4Q96NY8 510 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 SMAD5Q99717 465 aaKnown RBP14.06□□□□□ -0.16
PABPC1-201ENST00000318607 CEP44Q9C0F1 390 aa14.06□□□□□ -0.16
PABPC1-201ENST00000318607 RAD51BO15315 384 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 FAM20BO75063 409 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 IDH2P48735 452 aaKnown RBP14.05□□□□□ -0.16
PABPC1-201ENST00000318607 ATP6V0D1P61421 351 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 HERVK_113P63132 956 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 DDX39BQ13838 428 aaKnown RBP14.05□□□□□ -0.16
PABPC1-201ENST00000318607 FAM174BQ3ZCQ3 159 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 TRIM60Q495X7 471 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 CYP27C1Q4G0S4 372 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 SULT1C3Q6IMI6 304 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 DENND5AQ6IQ26 1287 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 RGMBQ6NW40 437 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 OR2T12Q8NG77 320 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 ZHX1-C8orf76Q96EF9 292 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 HNRNPABQ99729 332 aaKnown RBP14.05□□□□□ -0.16
PABPC1-201ENST00000318607 ERVK-6Q9BXR3 956 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 ACTR8Q9H981 624 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 ENTPD7Q9NQZ7 604 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.05□□□□□ -0.162e-21■■■■■ 27.9
PABPC1-201ENST00000318607 UNCXA6NJT0 531 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 GAS2O43903 313 aaKnown RBP14.05□□□□□ -0.16
PABPC1-201ENST00000318607 NTRK1P04629 796 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 CAPN1P07384 714 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 BMP4P12644 408 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 EPHA2P29317 976 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 RPS3AP61247 264 aaKnown RBP14.05□□□□□ -0.16
PABPC1-201ENST00000318607 PPIL2Q13356 520 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 DDR2Q16832 855 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 AASDHQ4L235 1098 aaPredicted RBP14.05□□□□□ -0.16
PABPC1-201ENST00000318607 C6orf141Q5SZD1 244 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 UNC93AQ86WB7 457 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 TMEM126BQ8IUX1 230 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 KRTCAP2Q8N6L1 136 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 OR52J3Q8NH60 311 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 CHPT1Q8WUD6 406 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 CCDC126Q96EE4 140 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 HMCESQ96FZ2 354 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 RPRD1AQ96P16 312 aaPredicted RBP14.05□□□□□ -0.16
PABPC1-201ENST00000318607 CITED4Q96RK1 184 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 TNKS2Q9H2K2 1166 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 ATP13A3Q9H7F0 1226 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 MRGBPQ9NV56 204 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 PCDHGA11Q9Y5H2 935 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 OAS3Q9Y6K5 1087 aaKnown RBP14.05□□□□□ -0.16
PABPC1-201ENST00000318607 FER1L6Q2WGJ9 1857 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 AQP12BA6NM10 295 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 CD3EAPO15446 510 aaKnown RBP14.05□□□□□ -0.16
PABPC1-201ENST00000318607 MTSS1O43312 755 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 POU2F1P14859 743 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 IL12AP29459 219 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 OAZ1P54368 228 aa14.05□□□□□ -0.16
PABPC1-201ENST00000318607 GALNT2Q10471 571 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms