RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 FNDC3AQ9Y2H6 1198 aaKnown RBP9.56□□□□□ -0.88
PTPRA-202ENST00000318266 CAB39Q9Y376 341 aaPredicted RBP9.56□□□□□ -0.88
PTPRA-202ENST00000318266 GSTA4O15217 222 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 ASNA1O43681 348 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 CHRNA1P02708 482 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 UMPSP11172 480 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 SPNP16150 400 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 NEK2P51955 445 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 FAM187BQ17R55 369 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 P2RY8Q86VZ1 359 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 CILP2Q8IUL8 1156 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 PLD3Q8IV08 490 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 CCDC103Q8IW40 242 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 LEMD2Q8NC56 503 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 PAPD5Q8NDF8 572 aaKnown RBP9.56□□□□□ -0.88
PTPRA-202ENST00000318266 FAR1Q8WVX9 515 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 L3HYPDHQ96EM0 354 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 KLHL5Q96PQ7 755 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 SLC2A13Q96QE2 648 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 LRRC3Q9BY71 257 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 SLC39A8Q9C0K1 460 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 LEF1Q9UJU2 399 aaPredicted RBP9.56□□□□□ -0.88
PTPRA-202ENST00000318266 UBA6A0AVT1 1052 aaPredicted RBP9.56□□□□□ -0.88
PTPRA-202ENST00000318266 GUCY1B2O75343 617 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 DNAJB1P25685 340 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 CCR1P32246 355 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 BMPR1AP36894 532 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 SERPINB10P48595 397 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 TRPC1P48995 793 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 GEMP55040 296 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 GALNT1Q10472 559 aaPredicted RBP9.56□□□□□ -0.88
PTPRA-202ENST00000318266 ILF2Q12905 390 aaKnown RBP9.56□□□□□ -0.88
PTPRA-202ENST00000318266 SMN1Q16637 294 aaKnown RBP9.56□□□□□ -0.88
PTPRA-202ENST00000318266 ATP6AP1LQ52LC2 224 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 KIAA0319Q5VV43 1072 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 DCAF15Q66K64 600 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 SPATC1Q76KD6 591 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 ARMCX6Q7L4S7 300 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 C14orf80Q86SX3 495 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 RIMKLAQ8IXN7 391 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 MICALL2Q8IY33 904 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 TMEM199Q8N511 208 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 LRRC52Q8N7C0 313 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 GOLM1Q8NBJ4 401 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 FAM83FQ8NEG4 500 aaPredicted RBP9.56□□□□□ -0.88
PTPRA-202ENST00000318266 OR6Q1Q8NGQ2 317 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 NCLNQ969V3 563 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 OTUD5Q96G74 571 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 TBATAQ96M53 351 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 FCRL5Q96RD9 977 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 OSMRQ99650 979 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 MYOCQ99972 504 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 THUMPD3Q9BV44 507 aaKnown RBP9.56□□□□□ -0.88
PTPRA-202ENST00000318266 SPATC1LQ9H0A9 340 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 TRIT1Q9H3H1 467 aaKnown RBP9.56□□□□□ -0.88
PTPRA-202ENST00000318266 RMND5AQ9H871 391 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 FBXO10Q9UK96 956 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 PHIPQ8WWQ0 1821 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 LOC100130705A0A1B0GUX0 176 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 ANKRD34BA5PLL1 514 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 MATN4O95460 622 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 ANGPTL1O95841 491 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 ANXA6P08133 673 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 RAP2AP10114 183 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 MTHFD2P13995 350 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 CD1DP15813 335 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 CD86P42081 329 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 POLD2P49005 469 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 ALDH7A1P49419 539 aaKnown RBP9.55□□□□□ -0.88
PTPRA-202ENST00000318266 DAOAP59103 153 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 RAPSNQ13702 412 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 RBBP7Q16576 425 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 HIST2H2ACQ16777 129 aaPredicted RBP9.55□□□□□ -0.88
PTPRA-202ENST00000318266 SYT16Q17RD7 645 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 LRIT3Q3SXY7 679 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.55□□□□□ -0.88
PTPRA-202ENST00000318266 RSBN1Q5VWQ0 802 aaPredicted RBP9.55□□□□□ -0.88
PTPRA-202ENST00000318266 KANK2Q63ZY3 851 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 ARMCX2Q7L311 632 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 TMEM179BQ7Z7N9 219 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 TAC4Q86UU9 113 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 FAM126BQ8IXS8 530 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 SYTL1Q8IYJ3 562 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 CDYL2Q8N8U2 506 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 OR2T11Q8NH01 316 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 GAD1Q99259 594 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 ASPSCR1Q9BZE9 553 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 NACA2Q9H009 215 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 NT5MQ9NPB1 228 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 ENTPD7Q9NQZ7 604 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 CPA4Q9UI42 421 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 SMIM28A0A1B0GU29 152 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 A8MV72 311 aaPredicted RBP9.55□□□□□ -0.88
PTPRA-202ENST00000318266 C19orf81C9J6K1 198 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 MFN2O95140 757 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 LGALS2P05162 132 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 MYL3P08590 195 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 PCMT1P22061 227 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 HOXA11P31270 313 aaPredicted RBP9.55□□□□□ -0.88
PTPRA-202ENST00000318266 RPL34P49207 117 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms