RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 AGTP01019 485 aa17.47■□□□□ 0.39
TPM1-203ENST00000317516 ITGB2P05107 769 aa17.47■□□□□ 0.39
TPM1-203ENST00000317516 RBP3P10745 1247 aa17.47■□□□□ 0.39
TPM1-203ENST00000317516 UGT1A6P19224 532 aa17.47■□□□□ 0.39
TPM1-203ENST00000317516 UGT1A1P22309 533 aa17.47■□□□□ 0.39
TPM1-203ENST00000317516 UGT1A4P22310 534 aa17.47■□□□□ 0.39
TPM1-203ENST00000317516 UGT1A3P35503 534 aa17.47■□□□□ 0.39
TPM1-203ENST00000317516 SLC19A1P41440 591 aa17.47■□□□□ 0.39
TPM1-203ENST00000317516 HALP42357 657 aa17.47■□□□□ 0.39
TPM1-203ENST00000317516 VAV2P52735 878 aa17.47■□□□□ 0.39
TPM1-203ENST00000317516 MC2RQ01718 297 aa17.47■□□□□ 0.39
TPM1-203ENST00000317516 SEPT7Q16181 437 aaKnown RBP17.47■□□□□ 0.39
TPM1-203ENST00000317516 KHDC1Q4VXA5 237 aaKnown RBP17.47■□□□□ 0.39
TPM1-203ENST00000317516 CEACAM20Q6UY09 585 aa17.47■□□□□ 0.39
TPM1-203ENST00000317516 AMZ2Q86W34 360 aa17.47■□□□□ 0.39
TPM1-203ENST00000317516 IL22RA1Q8N6P7 574 aa17.47■□□□□ 0.39
TPM1-203ENST00000317516 CXorf40BQ96DE9 158 aa17.47■□□□□ 0.39
TPM1-203ENST00000317516 BAG1Q99933 345 aaPredicted RBP17.47■□□□□ 0.39
TPM1-203ENST00000317516 ARHGAP9Q9BRR9 750 aa17.47■□□□□ 0.39
TPM1-203ENST00000317516 FICDQ9BVA6 458 aa17.47■□□□□ 0.39
TPM1-203ENST00000317516 TBC1D10AQ9BXI6 508 aa17.47■□□□□ 0.39
TPM1-203ENST00000317516 UGT1A7Q9HAW7 530 aa17.47■□□□□ 0.39
TPM1-203ENST00000317516 UGT1A10Q9HAW8 530 aa17.47■□□□□ 0.39
TPM1-203ENST00000317516 UGT1A8Q9HAW9 530 aa17.47■□□□□ 0.39
TPM1-203ENST00000317516 FBXO8Q9NRD0 319 aa17.47■□□□□ 0.39
TPM1-203ENST00000317516 SCHIP1Q9P0W5 487 aaPredicted RBP17.47■□□□□ 0.39
TPM1-203ENST00000317516 BAHCC1Q9P281 2608 aa17.46■□□□□ 0.39
TPM1-203ENST00000317516 GOLGA6L9A6NEM1 432 aa17.46■□□□□ 0.39
TPM1-203ENST00000317516 KCNN4O15554 427 aa17.46■□□□□ 0.39
TPM1-203ENST00000317516 UBXN7O94888 489 aa17.46■□□□□ 0.39
TPM1-203ENST00000317516 LPOP22079 712 aaPredicted RBP17.46■□□□□ 0.39
TPM1-203ENST00000317516 RPL10P27635 214 aaKnown RBP17.46■□□□□ 0.39
TPM1-203ENST00000317516 PDE1BQ01064 536 aa17.46■□□□□ 0.39
TPM1-203ENST00000317516 KIF5AQ12840 1032 aa17.46■□□□□ 0.39
TPM1-203ENST00000317516 TAF1AQ15573 450 aaPredicted RBP17.46■□□□□ 0.39
TPM1-203ENST00000317516 ANKRD20A2Q5SQ80 823 aa17.46■□□□□ 0.39
TPM1-203ENST00000317516 ANKRD20A1Q5TYW2 823 aa17.46■□□□□ 0.39
TPM1-203ENST00000317516 ANKRD20A3Q5VUR7 823 aa17.46■□□□□ 0.39
TPM1-203ENST00000317516 RANBP10Q6VN20 620 aa17.46■□□□□ 0.39
TPM1-203ENST00000317516 RAD9BQ6WBX8 426 aa17.46■□□□□ 0.39
TPM1-203ENST00000317516 VASH2Q86V25 355 aa17.46■□□□□ 0.39
TPM1-203ENST00000317516 SYCE1Q8N0S2 351 aa17.46■□□□□ 0.39
TPM1-203ENST00000317516 UBL4BQ8N7F7 174 aa17.46■□□□□ 0.39
TPM1-203ENST00000317516 TTC13Q8NBP0 860 aa17.46■□□□□ 0.39
TPM1-203ENST00000317516 DDHD1Q8NEL9 900 aa17.46■□□□□ 0.39
TPM1-203ENST00000317516 ZNF398Q8TD17 642 aa17.46■□□□□ 0.39
TPM1-203ENST00000317516 JPH3Q8WXH2 748 aaPredicted RBP17.46■□□□□ 0.39
TPM1-203ENST00000317516 NKD1Q969G9 470 aa17.46■□□□□ 0.39
TPM1-203ENST00000317516 MED8Q96G25 268 aa17.46■□□□□ 0.39
TPM1-203ENST00000317516 ZNF514Q96K75 400 aaPredicted RBP17.46■□□□□ 0.39
TPM1-203ENST00000317516 LACRTQ9GZZ8 138 aa17.46■□□□□ 0.39
TPM1-203ENST00000317516 C10orf88Q9H8K7 445 aa17.46■□□□□ 0.39
TPM1-203ENST00000317516 ZNF624Q9P2J8 865 aaPredicted RBP17.46■□□□□ 0.39
TPM1-203ENST00000317516 KLHL3Q9UH77 587 aa17.46■□□□□ 0.39
TPM1-203ENST00000317516 AMFRQ9UKV5 643 aa17.46■□□□□ 0.39
TPM1-203ENST00000317516 MGAQ8IWI9 3026 aa17.45■□□□□ 0.38
TPM1-203ENST00000317516 KLHL33A6NCF5 533 aa17.45■□□□□ 0.38
TPM1-203ENST00000317516 PRR19A6NJB7 356 aa17.45■□□□□ 0.38
TPM1-203ENST00000317516 TOX3O15405 576 aaPredicted RBP17.45■□□□□ 0.38
TPM1-203ENST00000317516 BUD23O43709 281 aaKnown RBP17.45■□□□□ 0.38
TPM1-203ENST00000317516 POP7O75817 140 aaKnown RBP17.45■□□□□ 0.38
TPM1-203ENST00000317516 CRTAMO95727 393 aa17.45■□□□□ 0.38
TPM1-203ENST00000317516 MSH3P20585 1137 aa17.45■□□□□ 0.38
TPM1-203ENST00000317516 SRSF6Q13247 344 aaKnown RBP17.45■□□□□ 0.38
TPM1-203ENST00000317516 LY6DQ14210 128 aa17.45■□□□□ 0.38
TPM1-203ENST00000317516 LONRF2Q1L5Z9 754 aa17.45■□□□□ 0.38
TPM1-203ENST00000317516 ANKS6Q68DC2 871 aa17.45■□□□□ 0.38
TPM1-203ENST00000317516 TMEM220Q6QAJ8 160 aa17.45■□□□□ 0.38
TPM1-203ENST00000317516 PEX26Q7Z412 305 aa17.45■□□□□ 0.38
TPM1-203ENST00000317516 C11orf96Q7Z7L8 435 aa17.45■□□□□ 0.38
TPM1-203ENST00000317516 CACNA2D3Q8IZS8 1091 aa17.45■□□□□ 0.38
TPM1-203ENST00000317516 BMPERQ8N8U9 685 aa17.45■□□□□ 0.38
TPM1-203ENST00000317516 SPATA13Q96N96 652 aa17.45■□□□□ 0.38
TPM1-203ENST00000317516 SLC40A1Q9NP59 571 aa17.45■□□□□ 0.38
TPM1-203ENST00000317516 SMOXQ9NWM0 555 aa17.45■□□□□ 0.38
TPM1-203ENST00000317516 TRIM10Q9UDY6 481 aa17.45■□□□□ 0.38
TPM1-203ENST00000317516 FEZ2Q9UHY8 353 aaPredicted RBP17.45■□□□□ 0.38
TPM1-203ENST00000317516 REXO2Q9Y3B8 237 aaKnown RBP17.45■□□□□ 0.38
TPM1-203ENST00000317516 PCDHGA4Q9Y5G9 962 aa17.45■□□□□ 0.38
TPM1-203ENST00000317516 MIF4GDA9UHW6 222 aaKnown RBP17.44■□□□□ 0.38
TPM1-203ENST00000317516 POLR1CO15160 346 aaPredicted RBP17.44■□□□□ 0.38
TPM1-203ENST00000317516 ANKRD34CP0C6C1 535 aa17.44■□□□□ 0.38
TPM1-203ENST00000317516 PYGMP11217 842 aa17.44■□□□□ 0.38
TPM1-203ENST00000317516 BRAFP15056 766 aa17.44■□□□□ 0.38
TPM1-203ENST00000317516 TYRP1P17643 537 aa17.44■□□□□ 0.38
TPM1-203ENST00000317516 AKT1P31749 480 aa17.44■□□□□ 0.38
TPM1-203ENST00000317516 ARSDP51689 593 aa17.44■□□□□ 0.38
TPM1-203ENST00000317516 DRG2P55039 364 aaKnown RBP17.44■□□□□ 0.38
TPM1-203ENST00000317516 DMPKQ09013 629 aa17.44■□□□□ 0.38
TPM1-203ENST00000317516 GPRC6AQ5T6X5 926 aa17.44■□□□□ 0.38
TPM1-203ENST00000317516 BEND7Q8N7W2 519 aaPredicted RBP17.44■□□□□ 0.38
TPM1-203ENST00000317516 RASGEF1AQ8N9B8 481 aa17.44■□□□□ 0.38
TPM1-203ENST00000317516 LRRC57Q8N9N7 239 aa17.44■□□□□ 0.38
TPM1-203ENST00000317516 ACRBPQ8NEB7 543 aa17.44■□□□□ 0.38
TPM1-203ENST00000317516 RTP4Q96DX8 246 aa17.44■□□□□ 0.38
TPM1-203ENST00000317516 ZDHHC12Q96GR4 267 aa17.44■□□□□ 0.38
TPM1-203ENST00000317516 C9orf72Q96LT7 481 aa17.44■□□□□ 0.38
TPM1-203ENST00000317516 TRIT1Q9H3H1 467 aaKnown RBP17.44■□□□□ 0.38
TPM1-203ENST00000317516 ARL5AQ9Y689 179 aa17.44■□□□□ 0.38
TPM1-203ENST00000317516 MN1Q10571 1320 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms