RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 OR13J1Q8NGT2 312 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 NDNFQ8TB73 568 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 ACTL9Q8TC94 416 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 UTP15Q8TED0 518 aaKnown RBP6.59□□□□□ -1.35
ZNF540-201ENST00000316433 SMG7Q92540 1137 aaKnown RBP6.59□□□□□ -1.35
ZNF540-201ENST00000316433 NELL1Q92832 810 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 NT5C3BQ969T7 300 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 SLCO4A1Q96BD0 722 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 ARL5BQ96KC2 179 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 LENG8Q96PV6 779 aaPredicted RBP6.59□□□□□ -1.35
ZNF540-201ENST00000316433 OR52B2Q96RD2 323 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 POLR3FQ9H1D9 316 aaPredicted RBP6.59□□□□□ -1.35
ZNF540-201ENST00000316433 IKZF4Q9H2S9 585 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 BRD9Q9H8M2 597 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 ANKHQ9HCJ1 492 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 PIH1D1Q9NWS0 290 aaKnown RBP6.59□□□□□ -1.35
ZNF540-201ENST00000316433 SFMBT1Q9UHJ3 866 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 TRIM38O00635 465 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 ZBTB14O43829 449 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 GABARAPO95166 117 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 WDPCPO95876 746 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 PRKCGP05129 697 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 KRT19P08727 400 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 ENO3P13929 434 aaPredicted RBP6.59□□□□□ -1.35
ZNF540-201ENST00000316433 HPGDP15428 266 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 GTF2E2P29084 291 aaKnown RBP6.59□□□□□ -1.35
ZNF540-201ENST00000316433 CAPGP40121 348 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 ARCN1P48444 511 aaKnown RBP6.59□□□□□ -1.35
ZNF540-201ENST00000316433 LIG4P49917 911 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 TKTL1P51854 596 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 ARFIP1P53367 373 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 EIF6P56537 245 aaKnown RBP6.59□□□□□ -1.35
ZNF540-201ENST00000316433 DNAJB13P59910 316 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 ERVFC1P60507 584 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 GPR50Q13585 617 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 EFR3AQ14156 821 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 TSC22D1Q15714 1073 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 GPAT3Q53EU6 434 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 PDSS1Q5T2R2 415 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 TEDDM1Q5T9Z0 273 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 PIK3R6Q5UE93 754 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 EPGNQ6UW88 154 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 ZNF517Q6ZMY9 492 aaPredicted RBP6.59□□□□□ -1.35
ZNF540-201ENST00000316433 STRADAQ7RTN6 431 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 GPAT4Q86UL3 456 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 SLC22A15Q8IZD6 547 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 NLGN4XQ8N0W4 816 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 KDM1BQ8NB78 822 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 OR52N1Q8NH53 320 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 DYNC2LI1Q8TCX1 351 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 GANCQ8TET4 914 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 NCLNQ969V3 563 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 ASB9Q96DX5 294 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 POM121Q96HA1 1249 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 REXO4Q9GZR2 422 aaKnown RBP6.59□□□□□ -1.35
ZNF540-201ENST00000316433 RANBP3Q9H6Z4 567 aaPredicted RBP6.59□□□□□ -1.35
ZNF540-201ENST00000316433 ACAD9Q9H845 621 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 NECTIN3Q9NQS3 549 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 SPATA6Q9NWH7 488 aaPredicted RBP6.59□□□□□ -1.35
ZNF540-201ENST00000316433 ING3Q9NXR8 418 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 AP4E1Q9UPM8 1137 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 MFHAS1Q9Y4C4 1052 aa6.59□□□□□ -1.35
ZNF540-201ENST00000316433 CIB4A0PJX0 185 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 HMX2A2RU54 273 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 CARNS1A5YM72 827 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 C9IYK1 514 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 HNRNPDLO14979 420 aaKnown RBP6.58□□□□□ -1.36
ZNF540-201ENST00000316433 SYN3O14994 580 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 SSX4O60224 188 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 PGAM1P18669 254 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 MSH3P20585 1137 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 DPP6P42658 865 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 TNK1Q13470 666 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 PAFAH1B3Q15102 231 aaKnown RBP6.58□□□□□ -1.36
ZNF540-201ENST00000316433 SLC14A2Q15849 920 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 AANATQ16613 207 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 COLEC12Q5KU26 742 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 MPP7Q5T2T1 576 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 MPZL3Q6UWV2 235 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 HTR3DQ70Z44 454 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 C16orf62Q7Z3J2 963 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 GLIS1Q8NBF1 620 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 ACER1Q8TDN7 264 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 SLC7A6Q92536 515 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 RIT1Q92963 219 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 PGAP3Q96FM1 320 aaPredicted RBP6.58□□□□□ -1.36
ZNF540-201ENST00000316433 MAGEB10Q96LZ2 347 aaPredicted RBP6.58□□□□□ -1.36
ZNF540-201ENST00000316433 DGCR6LQ9BY27 220 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 WDR41Q9HAD4 459 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 POLE3Q9NRF9 147 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 PLSCR2Q9NRY7 297 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 HPF1Q9NWY4 346 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 COA4Q9NYJ1 87 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 MALT1Q9UDY8 824 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 CHORDC1Q9UHD1 332 aaPredicted RBP6.58□□□□□ -1.36
ZNF540-201ENST00000316433 YDJCA8MPS7 323 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 GNB5O14775 395 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 AXIN1O15169 862 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 PSMD3O43242 534 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 B4GAT1O43505 415 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms