RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 TARM1B6A8C7 271 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 PLK4O00444 970 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 BTN3A1O00481 513 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 ATP6V1G1O75348 118 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 MOSPD3O75425 235 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 PRAMEF1O95521 474 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 FAM58BPP0C7Q3 252 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 GFAPP14136 432 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 CEBPBP17676 345 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 GRK2P25098 689 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 ZNF140P52738 457 aaPredicted RBP7.54□□□□□ -1.2
TRIM55-202ENST00000315962 FOXA1P55317 472 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 PTK2BQ14289 1009 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 ZNF648Q5T619 568 aaPredicted RBP7.54□□□□□ -1.2
TRIM55-202ENST00000315962 SEL1L3Q68CR1 1132 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 RETSATQ6NUM9 610 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 CCDC149Q6ZUS6 474 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 PTCD2Q8WV60 388 aaKnown RBP7.54□□□□□ -1.2
TRIM55-202ENST00000315962 LRCH3Q96II8 777 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 NOL11Q9H8H0 719 aaKnown RBP7.54□□□□□ -1.2
TRIM55-202ENST00000315962 FBRSL1Q9HCM7 1045 aaKnown RBP7.54□□□□□ -1.2
TRIM55-202ENST00000315962 STK39Q9UEW8 545 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 RNF11Q9Y3C5 154 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 PKP3Q9Y446 797 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 ASB1Q9Y576 335 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 COPG1Q9Y678 874 aaKnown RBP7.54□□□□□ -1.2
TRIM55-202ENST00000315962 COMMD10Q9Y6G5 202 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 NPEPPSL1A6NEC2 478 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 TTC34A8MYJ7 566 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 E5RI56 91 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 E7ENX8 843 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 GRID2O43424 1007 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 BAIAP3O94812 1187 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 OLFM2O95897 454 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 PRDX3P30048 256 aaKnown RBP7.53□□□□□ -1.2
TRIM55-202ENST00000315962 YAP1P46937 504 aaKnown RBP7.53□□□□□ -1.2
TRIM55-202ENST00000315962 NRIP1P48552 1158 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 RPL14P50914 215 aaKnown RBP7.53□□□□□ -1.2
TRIM55-202ENST00000315962 CCR3P51677 355 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 ADARP55265 1226 aaKnown RBP7.53□□□□□ -1.2
TRIM55-202ENST00000315962 PPIGQ13427 754 aaKnown RBP eCLIP7.53□□□□□ -1.2
TRIM55-202ENST00000315962 TAF1AQ15573 450 aaPredicted RBP7.53□□□□□ -1.2
TRIM55-202ENST00000315962 SETMARQ53H47 684 aaPredicted RBP7.53□□□□□ -1.2
TRIM55-202ENST00000315962 AGAP9Q5VTM2 703 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 CHST9Q7L1S5 443 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 ADGRG6Q86SQ4 1221 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 ADGRG2Q8IZP9 1017 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 SKA2Q8WVK7 121 aaPredicted RBP7.53□□□□□ -1.2
TRIM55-202ENST00000315962 SCAMP4Q969E2 229 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 ISL2Q96A47 359 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 ASIC4Q96FT7 647 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 MYO19Q96H55 970 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 ZNF599Q96NL3 588 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 BIRC8Q96P09 236 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 TMEM79Q9BSE2 394 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 RTKNQ9BST9 563 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 PIF1Q9H611 641 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 ASB8Q9H765 288 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 ZFYVE1Q9HBF4 777 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 NSMCE4AQ9NXX6 385 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 EPS15L1Q9UBC2 864 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 EBF1Q9UH73 591 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 EGFL7Q9UHF1 273 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 AURKCQ9UQB9 309 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 MRPS23Q9Y3D9 190 aaKnown RBP7.53□□□□□ -1.2
TRIM55-202ENST00000315962 TIMM22Q9Y584 194 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 F5P12259 2224 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 GON4LQ3T8J9 2241 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 SMIM31A0A1B0GVY4 71 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 SUPT3HB4E1H0 165 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 IPO13O94829 963 aaKnown RBP7.53□□□□□ -1.2
TRIM55-202ENST00000315962 EPOP01588 193 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 CYBBP04839 570 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 SRCP12931 536 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 HLA-EP13747 358 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 ZNF37AP17032 561 aaPredicted RBP7.53□□□□□ -1.2
TRIM55-202ENST00000315962 CES1P23141 567 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 ENTPD1P49961 510 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 SHHQ15465 462 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 PLA2G4EQ3MJ16 856 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 MPPE1Q53F39 396 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 PIGGQ5H8A4 983 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 HABP4Q5JVS0 413 aaKnown RBP7.53□□□□□ -1.2
TRIM55-202ENST00000315962 KLC3Q6P597 504 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 HTR3DQ70Z44 454 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 OFCC1Q8IZS5 231 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 MARVELD2Q8N4S9 558 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 PTGR2Q8N8N7 351 aaPredicted RBP7.53□□□□□ -1.2
TRIM55-202ENST00000315962 TRPC4APQ8TEL6 797 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 PIH1D2Q8WWB5 315 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 GAB3Q8WWW8 586 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 UBXN10Q96LJ8 280 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 MRPL57Q9BQC6 102 aaKnown RBP7.53□□□□□ -1.2
TRIM55-202ENST00000315962 RBM38Q9H0Z9 239 aaKnown RBP7.53□□□□□ -1.2
TRIM55-202ENST00000315962 IL26Q9NPH9 171 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 NLE1Q9NVX2 485 aaPredicted RBP7.53□□□□□ -1.2
TRIM55-202ENST00000315962 PTTG2Q9NZH5 202 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 BTRCQ9Y297 605 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 PRSS21Q9Y6M0 314 aa7.53□□□□□ -1.2
TRIM55-202ENST00000315962 COL4A4P53420 1690 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms