RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 AGMOQ6ZNB7 445 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 STK32CQ86UX6 486 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 LRRTM3Q86VH5 581 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 SPNS2Q8IVW8 549 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 HOMEZQ8IX15 550 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 PNPLA1Q8N8W4 532 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 MINDY2Q8NBR6 621 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 SH3RF2Q8TEC5 729 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 FUBP1Q96AE4 644 aaKnown RBP13.7□□□□□ -0.22
MKS1-201ENST00000313863 CDKN2AIPNLQ96HQ2 116 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 BTN2A3PQ96KV6 586 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 TEX37Q96LM6 180 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 CCDC138Q96M89 665 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 FEM1AQ9BSK4 669 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 ADNPQ9H2P0 1102 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 NMUR1Q9HB89 426 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 INTS7Q9NVH2 962 aaKnown RBP13.7□□□□□ -0.22
MKS1-201ENST00000313863 DNAJB9Q9UBS3 223 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 Q9Y3F1 56 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 G3V2T6 193 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 TMX2-CTNND1H3BSU7 103 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 BTN3A1O00481 513 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 GSTA4O15217 222 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 FOXD2O60548 495 aaPredicted RBP13.7□□□□□ -0.22
MKS1-201ENST00000313863 GGT1P19440 569 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 ELK4P28324 431 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 MAPKAPK2P49137 400 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 AFF1P51825 1210 aaKnown RBP13.7□□□□□ -0.22
MKS1-201ENST00000313863 KCNC4Q03721 635 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 SERINC3Q13530 473 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 PWP1Q13610 501 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 ZIK1Q3SY52 487 aaPredicted RBP13.7□□□□□ -0.22
MKS1-201ENST00000313863 GALNT18Q6P9A2 607 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 TBPL2Q6SJ96 375 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 PGBD5Q8N414 524 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 SLC15A4Q8N697 577 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 TANKQ92844 425 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 ZNF347Q96SE7 839 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 CGREF1Q99674 301 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 PAAF1Q9BRP4 392 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 TRIM8Q9BZR9 551 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 WDR12Q9GZL7 423 aaKnown RBP13.7□□□□□ -0.22
MKS1-201ENST00000313863 SOX17Q9H6I2 414 aaPredicted RBP13.7□□□□□ -0.22
MKS1-201ENST00000313863 GORASP2Q9H8Y8 452 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 NTN4Q9HB63 628 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 HMG20AQ9NP66 347 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 USE1Q9NZ43 259 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 SELENONQ9NZV5 590 aa13.7□□□□□ -0.22
MKS1-201ENST00000313863 BPTFQ12830 3046 aa13.69□□□□□ -0.22
MKS1-201ENST00000313863 H0Y858 1186 aa13.69□□□□□ -0.22
MKS1-201ENST00000313863 K7EPI3 171 aa13.69□□□□□ -0.22
MKS1-201ENST00000313863 GPR182O15218 404 aa13.69□□□□□ -0.22
MKS1-201ENST00000313863 RPLP2P05387 115 aaKnown RBP13.69□□□□□ -0.22
MKS1-201ENST00000313863 FMO4P31512 558 aa13.69□□□□□ -0.22
MKS1-201ENST00000313863 MTHFRP42898 656 aa13.69□□□□□ -0.22
MKS1-201ENST00000313863 BRCC3P46736 316 aa13.69□□□□□ -0.22
MKS1-201ENST00000313863 PSMD7P51665 324 aa13.69□□□□□ -0.22
MKS1-201ENST00000313863 YBX1P67809 324 aaKnown RBP13.69□□□□□ -0.22
MKS1-201ENST00000313863 ECT2LQ008S8 904 aa13.69□□□□□ -0.22
MKS1-201ENST00000313863 GSTM4Q03013 218 aa13.69□□□□□ -0.22
MKS1-201ENST00000313863 BFSP2Q13515 415 aa13.69□□□□□ -0.22
MKS1-201ENST00000313863 FAM219BQ5XKK7 198 aa13.69□□□□□ -0.22
MKS1-201ENST00000313863 XAF1Q6GPH4 301 aa13.69□□□□□ -0.22
MKS1-201ENST00000313863 GPSM1Q86YR5 675 aa13.69□□□□□ -0.22
MKS1-201ENST00000313863 SCN4BQ8IWT1 228 aa13.69□□□□□ -0.22
MKS1-201ENST00000313863 OR13C4Q8NGS5 318 aa13.69□□□□□ -0.22
MKS1-201ENST00000313863 PROKR1Q8TCW9 393 aa13.69□□□□□ -0.22
MKS1-201ENST00000313863 SUSD3Q96L08 255 aa13.69□□□□□ -0.22
MKS1-201ENST00000313863 ZBTB18Q99592 522 aa13.69□□□□□ -0.22
MKS1-201ENST00000313863 RBM4BQ9BQ04 359 aaKnown RBP13.69□□□□□ -0.22
MKS1-201ENST00000313863 RBM4Q9BWF3 364 aaKnown RBP13.69□□□□□ -0.22
MKS1-201ENST00000313863 LHPPQ9H008 270 aa13.69□□□□□ -0.22
MKS1-201ENST00000313863 TLR9Q9NR96 1032 aa13.69□□□□□ -0.22
MKS1-201ENST00000313863 GIN1Q9NXP7 522 aa13.69□□□□□ -0.22
MKS1-201ENST00000313863 TRMT6Q9UJA5 497 aaKnown RBP13.69□□□□□ -0.22
MKS1-201ENST00000313863 PDE10AQ9Y233 779 aa13.69□□□□□ -0.22
MKS1-201ENST00000313863 COMMD10Q9Y6G5 202 aa13.69□□□□□ -0.22
MKS1-201ENST00000313863 V9GYQ6 96 aa13.69□□□□□ -0.22
MKS1-201ENST00000313863 CCL15-CCL14A0A0B4J2E2 113 aa13.68□□□□□ -0.22
MKS1-201ENST00000313863 C1orf232A0A0U1RR37 186 aa13.68□□□□□ -0.22
MKS1-201ENST00000313863 NPEPPSL1A6NEC2 478 aa13.68□□□□□ -0.22
MKS1-201ENST00000313863 UPK1AO00322 258 aa13.68□□□□□ -0.22
MKS1-201ENST00000313863 PRAMEF11O60813 436 aa13.68□□□□□ -0.22
MKS1-201ENST00000313863 SERPINB7O75635 380 aa13.68□□□□□ -0.22
MKS1-201ENST00000313863 RSL1D1O76021 490 aaKnown RBP13.68□□□□□ -0.22
MKS1-201ENST00000313863 CNTN5O94779 1100 aa13.68□□□□□ -0.22
MKS1-201ENST00000313863 MT-ND1P03886 318 aa13.68□□□□□ -0.22
MKS1-201ENST00000313863 NFKBIAP25963 317 aa13.68□□□□□ -0.22
MKS1-201ENST00000313863 SHMT2P34897 504 aa13.68□□□□□ -0.22
MKS1-201ENST00000313863 POLR2IP36954 125 aaKnown RBP13.68□□□□□ -0.22
MKS1-201ENST00000313863 TUSC3Q13454 348 aa13.68□□□□□ -0.22
MKS1-201ENST00000313863 IL18R1Q13478 541 aa13.68□□□□□ -0.22
MKS1-201ENST00000313863 ATP1A4Q13733 1029 aa13.68□□□□□ -0.22
MKS1-201ENST00000313863 IHHQ14623 411 aa13.68□□□□□ -0.22
MKS1-201ENST00000313863 CCL15Q16663 113 aa13.68□□□□□ -0.22
MKS1-201ENST00000313863 FAM110CQ1W6H9 321 aa13.68□□□□□ -0.22
MKS1-201ENST00000313863 TRIM16LQ309B1 348 aa13.68□□□□□ -0.22
MKS1-201ENST00000313863 RFX4Q33E94 735 aa13.68□□□□□ -0.22
MKS1-201ENST00000313863 ALFQ53S48 1182 aa13.68□□□□□ -0.22
MKS1-201ENST00000313863 C6orf141Q5SZD1 244 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms