RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 KIAA1143Q96AT1 154 aaPredicted RBP8.03□□□□□ -1.12
TPM3-203ENST00000312970 TADA1Q96BN2 335 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 RTP4Q96DX8 246 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 PLEKHG4BQ96PX9 1271 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 CHP1Q99653 195 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 CTRCQ99895 268 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 ANP32EQ9BTT0 268 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 EFHD1Q9BUP0 239 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 TBC1D10AQ9BXI6 508 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 CEP41Q9BYV8 373 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 SLC25A18Q9H1K4 315 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 ADNPQ9H2P0 1102 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 TRIT1Q9H3H1 467 aaKnown RBP8.03□□□□□ -1.12
TPM3-203ENST00000312970 OSGEPL1Q9H4B0 414 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 NHEJ1Q9H9Q4 299 aaPredicted RBP8.03□□□□□ -1.12
TPM3-203ENST00000312970 UCK1Q9HA47 277 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 GLOD4Q9HC38 313 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 ARFGAP3Q9NP61 516 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 GEMIN8Q9NWZ8 242 aaKnown RBP8.03□□□□□ -1.12
TPM3-203ENST00000312970 NFKBIL1Q9UBC1 381 aaPredicted RBP8.03□□□□□ -1.12
TPM3-203ENST00000312970 SLC23A2Q9UGH3 650 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 ZNF711Q9Y462 761 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 PCDHGB7Q9Y5F8 929 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 PCDHGA11Q9Y5H2 935 aa8.03□□□□□ -1.12
TPM3-203ENST00000312970 LRBAP50851 2863 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 A0A0A6YYK5 440 aaPredicted RBP8.02□□□□□ -1.13
TPM3-203ENST00000312970 LILRA5A6NI73 299 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 ZNF891A8MT65 544 aaPredicted RBP8.02□□□□□ -1.13
TPM3-203ENST00000312970 POLR1CO15160 346 aaPredicted RBP8.02□□□□□ -1.13
TPM3-203ENST00000312970 SUV39H1O43463 412 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 PPFIA2O75334 1257 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 PMPCBO75439 489 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 UBXN7O94888 489 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 CDK14O94921 469 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 NDST3O95803 873 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 MT-CYBP00156 380 aaPredicted RBP8.02□□□□□ -1.13
TPM3-203ENST00000312970 C9P02748 559 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 KRT1P04264 644 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 BPIP17213 487 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 AMD1P17707 334 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 IDSP22304 550 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 SLC19A1P41440 591 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 NOP2P46087 812 aaKnown RBP8.02□□□□□ -1.13
TPM3-203ENST00000312970 DYNLT1P63172 113 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 UBE2IP63279 158 aaKnown RBP8.02□□□□□ -1.13
TPM3-203ENST00000312970 ABHD18Q0P651 414 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 TMEM115Q12893 351 aaPredicted RBP8.02□□□□□ -1.13
TPM3-203ENST00000312970 TFDP2Q14188 446 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 CLCA4Q14CN2 919 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 INSCQ1MX18 579 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 SKOR2Q2VWA4 1001 aaPredicted RBP8.02□□□□□ -1.13
TPM3-203ENST00000312970 ABRAXAS1Q6UWZ7 409 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 TMEM26Q6ZUK4 368 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 B4GALNT4Q76KP1 1039 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 LRRTM4Q86VH4 590 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 VSTM4Q8IW00 320 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 TRIM48Q8IWZ4 208 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 BRSK1Q8TDC3 778 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 TFB1MQ8WVM0 346 aaKnown RBP8.02□□□□□ -1.13
TPM3-203ENST00000312970 SLC45A3Q96JT2 553 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 C9orf72Q96LT7 481 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 TEKT5Q96M29 485 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 TTC25Q96NG3 672 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 CATSPER2Q96P56 530 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 OLFM3Q96PB7 478 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 OCSTAMPQ9BR26 566 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 TIMM29Q9BSF4 260 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 GPN2Q9H9Y4 310 aaPredicted RBP8.02□□□□□ -1.13
TPM3-203ENST00000312970 ABHD10Q9NUJ1 306 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 SPTLC3Q9NUV7 552 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.02□□□□□ -1.13
TPM3-203ENST00000312970 SCHIP1Q9P0W5 487 aaPredicted RBP8.02□□□□□ -1.13
TPM3-203ENST00000312970 ZNF624Q9P2J8 865 aaPredicted RBP8.02□□□□□ -1.13
TPM3-203ENST00000312970 KLHL3Q9UH77 587 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 FAM153AQ9UHL3 310 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 INTUQ9ULD6 942 aa8.02□□□□□ -1.13
TPM3-203ENST00000312970 TMEM184BQ9Y519 407 aaPredicted RBP8.02□□□□□ -1.13
TPM3-203ENST00000312970 SPTBN1Q01082 2364 aaKnown RBP8.02□□□□□ -1.13
TPM3-203ENST00000312970 LOC101059948A0A1B0GTJ6 334 aa8.01□□□□□ -1.13
TPM3-203ENST00000312970 LOC285095A0A1B0GVY8 99 aa8.01□□□□□ -1.13
TPM3-203ENST00000312970 TERTO14746 1132 aaKnown RBP8.01□□□□□ -1.13
TPM3-203ENST00000312970 AURKAO14965 403 aa8.01□□□□□ -1.13
TPM3-203ENST00000312970 TOX3O15405 576 aaPredicted RBP8.01□□□□□ -1.13
TPM3-203ENST00000312970 NKX2-8O15522 239 aa8.01□□□□□ -1.13
TPM3-203ENST00000312970 MTSS1O43312 755 aa8.01□□□□□ -1.13
TPM3-203ENST00000312970 SPOPO43791 374 aa8.01□□□□□ -1.13
TPM3-203ENST00000312970 CST8O60676 142 aa8.01□□□□□ -1.13
TPM3-203ENST00000312970 KCNJ13O60928 360 aa8.01□□□□□ -1.13
TPM3-203ENST00000312970 STK17BO94768 372 aa8.01□□□□□ -1.13
TPM3-203ENST00000312970 EPOP01588 193 aa8.01□□□□□ -1.13
TPM3-203ENST00000312970 SLC4A1P02730 911 aa8.01□□□□□ -1.13
TPM3-203ENST00000312970 ANKRD34CP0C6C1 535 aa8.01□□□□□ -1.13
TPM3-203ENST00000312970 TNNT1P13805 278 aa8.01□□□□□ -1.13
TPM3-203ENST00000312970 TYRP1P17643 537 aa8.01□□□□□ -1.13
TPM3-203ENST00000312970 VCLP18206 1134 aa8.01□□□□□ -1.13
TPM3-203ENST00000312970 COMTP21964 271 aa8.01□□□□□ -1.13
TPM3-203ENST00000312970 PTPN3P26045 913 aa8.01□□□□□ -1.13
TPM3-203ENST00000312970 RPL10P27635 214 aaKnown RBP8.01□□□□□ -1.13
TPM3-203ENST00000312970 HMGCLP35914 325 aa8.01□□□□□ -1.13
TPM3-203ENST00000312970 CDKN2BP42772 138 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms