RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 ARHGAP36Q6ZRI8 547 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 ZBED6CLQ96FA7 236 aaPredicted RBP8.74□□□□□ -1.01
COL6A5-202ENST00000312481 P2RY11Q96G91 374 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 FANCFQ9NPI8 374 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 ANKDD1BA6NHY2 528 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 SCN2BO60939 215 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 HSMCR30P0CW71 290 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 SCAPQ12770 1279 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 LARS2Q15031 903 aaKnown RBP8.74□□□□□ -1.01
COL6A5-202ENST00000312481 RTL10Q7L3V2 364 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 C10orf107Q8IVU9 208 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 ASB13Q8WXK3 278 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 EMID1Q96A84 441 aaPredicted RBP8.74□□□□□ -1.01
COL6A5-202ENST00000312481 TSGA13Q96PP4 275 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 BBS4Q96RK4 519 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 BCO2Q9BYV7 579 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 MTFR1LQ9H019 292 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 TMEM5Q9Y2B1 443 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 SLC27A6Q9Y2P4 619 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 MEMO1Q9Y316 297 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 CENPBD1B2RD01 187 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 ZNF879B4DU55 563 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 RGS1Q08116 209 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 OTUD3Q5T2D3 398 aaPredicted RBP8.74□□□□□ -1.01
COL6A5-202ENST00000312481 SLCO6A1Q86UG4 719 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 TRIM48Q8IWZ4 208 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 HS6ST3Q8IZP7 471 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 ERVK-10P10266 1014 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 MTHFRP42898 656 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 DUSP28Q4G0W2 176 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 GJC2Q5T442 439 aaPredicted RBP8.74□□□□□ -1.01
COL6A5-202ENST00000312481 UNC5DQ6UXZ4 953 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 DEFB106AQ8N104 65 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 ERLEC1Q96DZ1 483 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 C1orf74Q96LT6 269 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 SLC39A3Q9BRY0 314 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 IL1RL2Q9HB29 575 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 ESPL1Q14674 2120 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 ZNF432O94892 652 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 HIST1H2ABP04908 130 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 ZSCAN5DPP0CG00 497 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 HIST3H2AQ7L7L0 130 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 ERMP1Q7Z2K6 904 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 XYLT1Q86Y38 959 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 LPCAT1Q8NF37 534 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 HIST1H2ACQ93077 130 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 COPS8Q99627 209 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 C1QTNF1Q9BXJ1 281 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 CADM1Q9BY67 442 aaKnown RBP8.74□□□□□ -1.01
COL6A5-202ENST00000312481 ARMC1Q9NVT9 282 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 TRAV19A0A0A6YYK7 116 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 A0A1B0GVM2 712 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 TCAF2A6NFQ2 919 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 DGKIO75912 1065 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 CHRNGP07510 517 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 AP2S1P53680 142 aaPredicted RBP8.74□□□□□ -1.01
COL6A5-202ENST00000312481 MRPS6P82932 125 aaKnown RBP8.74□□□□□ -1.01
COL6A5-202ENST00000312481 SENP8Q96LD8 212 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 PANX1Q96RD7 426 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 EFCAB11Q9BUY7 163 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 TMEM39BQ9GZU3 492 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 XPR1Q9UBH6 696 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 COL11A1P12107 1806 aaPredicted RBP8.74□□□□□ -1.01
COL6A5-202ENST00000312481 PATJQ8NI35 1801 aa8.74□□□□□ -1.01
COL6A5-202ENST00000312481 HTR3EA5X5Y0 456 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 SHROOM1Q2M3G4 852 aaPredicted RBP8.73□□□□□ -1.01
COL6A5-202ENST00000312481 FSTL4Q6MZW2 842 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 EEPD1Q7L9B9 569 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 SCUBE3Q8IX30 993 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 KREMEN1Q96MU8 473 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 AIF1LQ9BQI0 150 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 PRDM12Q9H4Q4 367 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 NPAP1Q9NZP6 1156 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 A0A0X1KG70 313 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 DPPA5A6NC42 116 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 PGS1Q32NB8 556 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 CYP20A1Q6UW02 462 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 SLC43A2Q8N370 569 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 METTL25Q8N6Q8 603 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 PTGR2Q8N8N7 351 aaPredicted RBP8.73□□□□□ -1.01
COL6A5-202ENST00000312481 RNF217Q8TC41 542 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 RCN3Q96D15 328 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 ZFP57Q9NU63 452 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 ABI2Q9NYB9 513 aaPredicted RBP8.73□□□□□ -1.01
COL6A5-202ENST00000312481 PRKAG3Q9UGI9 489 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 NBNO60934 754 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 AVPR1AP37288 418 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 GHRHRQ02643 423 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 ABHD18Q0P651 414 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 NFE2L1Q14494 772 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 PAFAH1B3Q15102 231 aaKnown RBP8.73□□□□□ -1.01
COL6A5-202ENST00000312481 PLCL1Q15111 1095 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 STEAP4Q687X5 459 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 C14orf80Q86SX3 495 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 MINDY1Q8N5J2 469 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 GANCQ8TET4 914 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 USP7Q93009 1102 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 DSN1Q9H410 356 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 MPDZO75970 2070 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 CCL15-CCL14A0A0B4J2E2 113 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms