RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 NADKO95544 446 aaPredicted RBP12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 RARRES1P49788 294 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 OCLNQ16625 522 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 ACMSDQ8TDX5 336 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 HMGB4Q8WW32 186 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 OTUB2Q96DC9 234 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 NXPE2Q96DL1 559 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 NDC1Q9BTX1 674 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 ZNF490Q9ULM2 529 aaPredicted RBP12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 NINQ8N4C6 2090 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 SCGB1D2O95969 90 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 RIDAP52758 137 aaKnown RBP12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 DPYSQ14117 519 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 PDSS1Q5T2R2 415 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 NOXRED1Q6NXP6 359 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 UNC5BQ8IZJ1 945 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 TCAIMQ8N3R3 496 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 SLC43A3Q8NBI5 491 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 EBNA1BP2Q99848 306 aaKnown RBP12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 GDAP2Q9NXN4 497 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 ERVW-1Q9UQF0 538 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 MEIS2O14770 477 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 AZIN1O14977 448 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 HSPA12AO43301 675 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 ITGAVP06756 1048 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 PIWIL4Q7Z3Z4 852 aaKnown RBP12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 AMIGO2Q86SJ2 522 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 LCN9Q8WX39 176 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 B3GNT4Q9C0J1 378 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 ZNF226Q9NYT6 803 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 MAGEL2Q9UJ55 1249 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 ZNF221Q9UK13 617 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 PIRTP0C851 137 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 NFKB2Q00653 900 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 SNTA1Q13424 505 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 PLGLAQ15195 96 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 NAT14Q8WUY8 206 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 KCTD4Q8WVF5 259 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 KAT2AQ92830 837 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 SRMSQ9H3Y6 488 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 RNF19AQ9NV58 838 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 A8MUI8 341 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 HNRNPLP14866 589 aaKnown RBP eCLIP12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 VITQ6UXI7 678 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 FAM92BQ6ZTR7 304 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 ZBTB46Q86UZ6 589 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 C10orf107Q8IVU9 208 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 FAM13CQ8NE31 585 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 NSMCE3Q96MG7 304 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 PACSIN3Q9UKS6 424 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 KIF20BQ96Q89 1820 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 CLTCL1P53675 1640 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 TEX13CA0A0J9YWL9 993 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 PDCD5O14737 125 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 SLC30A4O14863 429 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 EPHB6O15197 1021 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 OR3A3P47888 321 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 OR3A2P47893 321 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 ATP6V0D1P61421 351 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 ALG10BQ5I7T1 473 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 TMEM192Q8IY95 271 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 GJD3Q8N144 294 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 TRMT10AQ8TBZ6 339 aaKnown RBP12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 RBM4BQ9BQ04 359 aaKnown RBP12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 HEPHQ9BQS7 1158 aa12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 RBM4Q9BWF3 364 aaKnown RBP12.76□□□□□ -0.37
SPTBN2-201ENST00000309996 PLOD2O00469 737 aa12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 LINGO3P0C6S8 592 aa12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 AQP1P29972 269 aa12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 E2F2Q14209 437 aa12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 MTX3Q5HYI7 312 aa12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 CAPN13Q6MZZ7 669 aaPredicted RBP12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 COQ8AQ8NI60 647 aa12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 PNPT1Q8TCS8 783 aaKnown RBP12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 CLDND1Q9NY35 253 aa12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 DKK3Q9UBP4 350 aa12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 CCNKO75909 580 aa12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 RPL5P46777 297 aaKnown RBP12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 ZNF143P52747 638 aaPredicted RBP12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 PRR5P85299 388 aa12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 LCN1P1Q5VSP4 162 aa12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 TMPRSS9Q7Z410 1059 aa12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 SPATA19Q7Z5L4 167 aa12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 RAB43Q86YS6 212 aa12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 RIOX2Q8IUF8 465 aa12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 TBC1D21Q8IYX1 336 aa12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 SRFBP1Q8NEF9 429 aaKnown RBP12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 RFKQ969G6 155 aa12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 LGMNQ99538 433 aa12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 TMEM168Q9H0V1 697 aa12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 CHST7Q9NS84 486 aa12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 AGO1Q9UL18 857 aaKnown RBP12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 METTL21EPA6NDL7 271 aa12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 NPEPPSL1A6NEC2 478 aa12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 TMEM88BA6NKF7 163 aa12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 PTX3P26022 381 aaPredicted RBP12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 EPHA3P29320 983 aa12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 TOB1P50616 345 aaPredicted RBP12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 SLC20A2Q08357 652 aa12.75□□□□□ -0.37
SPTBN2-201ENST00000309996 ELP6Q0PNE2 266 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms