RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 PID1Q7Z2X4 250 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 FAM160A2Q8N612 972 aaPredicted RBP8.2□□□□□ -1.1
CHD6-201ENST00000309279 FAM71DQ8N9W8 422 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 FAM216AQ8WUB2 273 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 RAB7BQ96AH8 199 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 TOE1Q96GM8 510 aaKnown RBP8.2□□□□□ -1.1
CHD6-201ENST00000309279 VPS50Q96JG6 964 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 ARL5BQ96KC2 179 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 CMTM3Q96MX0 182 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 SPATA13Q96N96 652 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 TMEM120AQ9BXJ8 343 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 BTBD1Q9H0C5 482 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 DYRK4Q9NR20 520 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 CYP8B1Q9UNU6 501 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 PPIL1Q9Y3C6 166 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 PCDHGC4Q9Y5F7 938 aa8.2□□□□□ -1.1
CHD6-201ENST00000309279 PLK4O00444 970 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 MAGEB3O15480 346 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 AP1G1O43747 822 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 KERAO60938 352 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 PIAS2O75928 621 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 DNAJC8O75937 253 aaPredicted RBP8.19□□□□□ -1.1
CHD6-201ENST00000309279 PGLSO95336 258 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 PRLP01236 227 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 TIMP2P16035 220 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 POU3F2P20265 443 aaPredicted RBP8.19□□□□□ -1.1
CHD6-201ENST00000309279 BCKDHBP21953 392 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 NBL1P41271 181 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 ABCG1P45844 678 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 TRAF2Q12933 501 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 SRSF5Q13243 272 aaKnown RBP8.19□□□□□ -1.1
CHD6-201ENST00000309279 SNX1Q13596 522 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 MAPKAPK3Q16644 382 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 POM121L1PQ3SYA9 428 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 PLK5Q496M5 336 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 NEK5Q6P3R8 708 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 KLC3Q6P597 504 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 C6orf15Q6UXA7 325 aaPredicted RBP8.19□□□□□ -1.1
CHD6-201ENST00000309279 TTC7BQ86TV6 843 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 ZSWIM9Q86XI8 627 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 GRAMD2AQ8IUY3 354 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 KLHDC8BQ8IXV7 354 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 SIMC1Q8NDZ2 872 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 ARMC2Q8NEN0 867 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 CADM4Q8NFZ8 388 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 CCDC110Q8TBZ0 833 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 MIPOL1Q8TD10 442 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 GANCQ8TET4 914 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 RHOVQ96L33 236 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 ATP6V1G3Q96LB4 118 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 TDRD1Q9BXT4 1180 aaKnown RBP8.19□□□□□ -1.1
CHD6-201ENST00000309279 PCED1AQ9H1Q7 454 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 DUSP15Q9H1R2 295 aaPredicted RBP8.19□□□□□ -1.1
CHD6-201ENST00000309279 GBA3Q9H227 469 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 EPC1Q9H2F5 836 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.19□□□□□ -1.1
CHD6-201ENST00000309279 NMRK1Q9NWW6 199 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 SMARCAL1Q9NZC9 954 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 KLHL8Q9P2G9 620 aaPredicted RBP8.19□□□□□ -1.1
CHD6-201ENST00000309279 GRHPRQ9UBQ7 328 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 TEKT2Q9UIF3 430 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 ZNF148Q9UQR1 794 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 INVSQ9Y283 1065 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 MED16Q9Y2X0 877 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 RAI2Q9Y5P3 530 aa8.19□□□□□ -1.1
CHD6-201ENST00000309279 GPR179Q6PRD1 2367 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 TNRC6BQ9UPQ9 1833 aaKnown RBP8.18□□□□□ -1.1
CHD6-201ENST00000309279 LOC285095A0A1B0GVY8 99 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 PDE2AO00408 941 aaPredicted RBP8.18□□□□□ -1.1
CHD6-201ENST00000309279 SPINT1O43278 529 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 SEMA4FO95754 770 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 MT-CYBP00156 380 aaPredicted RBP8.18□□□□□ -1.1
CHD6-201ENST00000309279 EPOP01588 193 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 HRGP04196 525 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 BPIP17213 487 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 NFKB1P19838 968 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 HLA-DPA1P20036 260 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 CA4P22748 312 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 HNF1BP35680 557 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 KCNJ1P48048 391 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 PRIM2P49643 509 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 RPL26P61254 145 aaKnown RBP8.18□□□□□ -1.1
CHD6-201ENST00000309279 DR1Q01658 176 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 SEMA5AQ13591 1074 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 ZNF267Q14586 743 aaPredicted RBP8.18□□□□□ -1.1
CHD6-201ENST00000309279 PLCL1Q15111 1095 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 PARP6Q2NL67 630 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 OXLD1Q5BKU9 147 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 ARMC12Q5T9G4 340 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 PMS2CLQ68D20 193 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 FAM124AQ86V42 546 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 CAND1Q86VP6 1230 aaKnown RBP8.18□□□□□ -1.1
CHD6-201ENST00000309279 C7orf57Q8NEG2 295 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 OR56B2PQ8NGI1 322 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 OR2T34Q8NGX1 318 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 OR14C36Q8NHC7 312 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 SPATA22Q8NHS9 363 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 GDAP1Q8TB36 358 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 PIH1D2Q8WWB5 315 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 PTP4A1Q93096 173 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms