RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 VPS4BO75351 444 aa10.6□□□□□ -0.71
MUC4-201ENST00000308466 RNASEH2AO75792 299 aaKnown RBP10.6□□□□□ -0.71
MUC4-201ENST00000308466 ZNF37AP17032 561 aaPredicted RBP10.6□□□□□ -0.71
MUC4-201ENST00000308466 CD97P48960 835 aa10.6□□□□□ -0.71
MUC4-201ENST00000308466 UNC50Q53HI1 259 aa10.6□□□□□ -0.71
MUC4-201ENST00000308466 STK40Q8N2I9 435 aa10.6□□□□□ -0.71
MUC4-201ENST00000308466 ITFG1Q8TB96 612 aa10.6□□□□□ -0.71
MUC4-201ENST00000308466 COX4I2Q96KJ9 171 aa10.6□□□□□ -0.71
MUC4-201ENST00000308466 YME1L1Q96TA2 773 aa10.6□□□□□ -0.71
MUC4-201ENST00000308466 TCF12Q99081 682 aa10.6□□□□□ -0.71
MUC4-201ENST00000308466 HOPXQ9BPY8 73 aaPredicted RBP10.6□□□□□ -0.71
MUC4-201ENST00000308466 RNF208Q9H0X6 261 aa10.6□□□□□ -0.71
MUC4-201ENST00000308466 IGSF5Q9NSI5 407 aa10.6□□□□□ -0.71
MUC4-201ENST00000308466 POLR3HQ9Y535 204 aaPredicted RBP10.6□□□□□ -0.71
MUC4-201ENST00000308466 CNOT3O75175 753 aaKnown RBP10.6□□□□□ -0.71
MUC4-201ENST00000308466 ULK1O75385 1050 aa10.6□□□□□ -0.71
MUC4-201ENST00000308466 BCAS2O75934 225 aaPredicted RBP10.6□□□□□ -0.71
MUC4-201ENST00000308466 OAZ2O95190 189 aa10.6□□□□□ -0.71
MUC4-201ENST00000308466 STC1P52823 247 aa10.6□□□□□ -0.71
MUC4-201ENST00000308466 LIPEQ05469 1076 aa10.6□□□□□ -0.71
MUC4-201ENST00000308466 HERC3Q15034 1050 aa10.6□□□□□ -0.71
MUC4-201ENST00000308466 PDCD4Q53EL6 469 aaKnown RBP10.6□□□□□ -0.71
MUC4-201ENST00000308466 DDX53Q86TM3 631 aaKnown RBP10.6□□□□□ -0.71
MUC4-201ENST00000308466 KBTBD6Q86V97 674 aa10.6□□□□□ -0.71
MUC4-201ENST00000308466 LSMEM2Q8N112 164 aa10.6□□□□□ -0.71
MUC4-201ENST00000308466 KLHDC9Q8NEP7 349 aa10.6□□□□□ -0.71
MUC4-201ENST00000308466 DACT3Q96B18 629 aaPredicted RBP10.6□□□□□ -0.71
MUC4-201ENST00000308466 ASB9Q96DX5 294 aa10.6□□□□□ -0.71
MUC4-201ENST00000308466 ZFRQ96KR1 1074 aaKnown RBP10.6□□□□□ -0.71
MUC4-201ENST00000308466 DEFB118Q96PH6 123 aa10.6□□□□□ -0.71
MUC4-201ENST00000308466 BDH2Q9BUT1 245 aa10.6□□□□□ -0.71
MUC4-201ENST00000308466 IPPKQ9H8X2 491 aa10.6□□□□□ -0.71
MUC4-201ENST00000308466 ZFYVE1Q9HBF4 777 aa10.6□□□□□ -0.71
MUC4-201ENST00000308466 PRAMEF1O95521 474 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 ZNF682O95780 498 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 OGNP20774 298 aaKnown RBP10.59□□□□□ -0.71
MUC4-201ENST00000308466 GABRR2P28476 465 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 PPM1FP49593 454 aaPredicted RBP10.59□□□□□ -0.71
MUC4-201ENST00000308466 CDKN1CP49918 316 aaPredicted RBP10.59□□□□□ -0.71
MUC4-201ENST00000308466 DNAJB13P59910 316 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 SH3BP2P78314 561 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 CREB5Q02930 508 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 PLCL1Q15111 1095 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 CRY1Q16526 586 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 LRRC73Q5JTD7 316 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 ZNF598Q86UK7 904 aaKnown RBP10.59□□□□□ -0.71
MUC4-201ENST00000308466 GRIN3AQ8TCU5 1115 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 PTERQ96BW5 349 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 FAM120BQ96EK7 910 aaKnown RBP10.59□□□□□ -0.71
MUC4-201ENST00000308466 C9orf16Q9BUW7 83 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 MRM3Q9HC36 420 aaKnown RBP10.59□□□□□ -0.71
MUC4-201ENST00000308466 TREX1Q9NSU2 369 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 SPO11Q9Y5K1 396 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 A8MU76 341 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 EVPLLA8MZ36 301 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 ANKRD66B4E2M5 251 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 H3BSA7 217 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 SLC22A2O15244 555 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 PAPSS2O95340 614 aaPredicted RBP10.59□□□□□ -0.71
MUC4-201ENST00000308466 CPSF4O95639 269 aaKnown RBP10.59□□□□□ -0.71
MUC4-201ENST00000308466 ENO2P09104 434 aaPredicted RBP10.59□□□□□ -0.71
MUC4-201ENST00000308466 DGKAP23743 735 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 PBLDP30039 288 aaPredicted RBP10.59□□□□□ -0.71
MUC4-201ENST00000308466 POLR2JP52435 117 aaKnown RBP10.59□□□□□ -0.71
MUC4-201ENST00000308466 LRP8Q14114 963 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 MAPKAPK3Q16644 382 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 ZNF423Q2M1K9 1284 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 SYTL3Q4VX76 610 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 RABL3Q5HYI8 236 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 TJAP1Q5JTD0 557 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 GCNT7Q6ZNI0 430 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 ADAMTSL2Q86TH1 951 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 COLGALT2Q8IYK4 626 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 OR13J1Q8NGT2 312 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 SLC45A3Q96JT2 553 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 ZFYVE19Q96K21 471 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 OSBPL11Q9BXB4 747 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 HIPK3Q9H422 1215 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 TFB2MQ9H5Q4 396 aaKnown RBP10.59□□□□□ -0.71
MUC4-201ENST00000308466 ZDHHC6Q9H6R6 413 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 TRIM39Q9HCM9 518 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 ZC4H2Q9NQZ6 224 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 TNPO3Q9Y5L0 923 aaKnown RBP10.59□□□□□ -0.71
MUC4-201ENST00000308466 CFAP99D6REC4 459 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 J3QRK9 145 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 DEAF1O75398 565 aaPredicted RBP10.59□□□□□ -0.71
MUC4-201ENST00000308466 KRT6AP02538 564 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 KRT6BP04259 564 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 INHAP05111 366 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 CDK4P11802 303 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 CD1EP15812 388 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 VARSP26640 1264 aaKnown RBP10.59□□□□□ -0.71
MUC4-201ENST00000308466 ARNTP27540 789 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 GKP32189 559 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 KRT6CP48668 564 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 RELAQ04206 551 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 VAC14Q08AM6 782 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 NOGQ13253 232 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 NR1D2Q14995 579 aa10.59□□□□□ -0.71
MUC4-201ENST00000308466 TLR1Q15399 786 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms