RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 ELOAQ14241 798 aaKnown RBP10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 PITRM1Q5JRX3 1037 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 PIK3R6Q5UE93 754 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 C22orf39Q6P5X5 142 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 AVL9Q8NBF6 648 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 DMAC2Q9NW81 257 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 MCM8Q9UJA3 840 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 KDELR3O43731 214 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 FAM163BP0C2L3 166 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 MAGEA11P43364 429 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 CCR8P51685 355 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 PLA2G16P53816 162 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 CA9Q16790 459 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 PUS10Q3MIT2 529 aaKnown RBP10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 NAPRTQ6XQN6 538 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 FAM220AQ7Z4H9 259 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 KCT2Q8NC54 265 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 TSC22D3Q99576 134 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 MCCC2Q9HCC0 563 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 FAM155BO75949 473 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 VIPR2P41587 438 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 ARHGAP40Q5TG30 622 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 ZBTB49Q6ZSB9 765 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 RPAINQ86UA6 219 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 OR4E2Q8NGC2 313 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 THAP11Q96EK4 314 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 ZNF599Q96NL3 588 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 SLITRK2Q9H156 845 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 NUDT4Q9NZJ9 180 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 LEF1Q9UJU2 399 aaPredicted RBP10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 EFR3BQ9Y2G0 817 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 ACTL7BQ9Y614 415 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 ATXN2Q99700 1313 aaKnown RBP10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 SIN3BO75182 1162 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 NDUFS1P28331 727 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 NR1D2Q14995 579 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 P4HA3Q7Z4N8 544 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 ZNF276Q8N554 614 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 PHOSPHO2Q8TCD6 241 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 NXNL1Q96CM4 212 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 LRTM1Q9HBL6 345 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 CLCA3PQ9Y6N3 262 aa10.59□□□□□ -0.71
SYNPO2-201ENST00000307142 TULP2O00295 520 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 SAP18O00422 153 aaKnown RBP10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 PEX1O43933 1283 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 CLDN7O95471 211 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 TOP3BO95985 862 aaKnown RBP10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 BMP7P18075 431 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 ELOCQ15369 112 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 SLC39A4Q6P5W5 647 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 LYSMD3Q7Z3D4 306 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 CYP2U1Q7Z449 544 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 TSEN2Q8NCE0 465 aaKnown RBP10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 MOSPD2Q8NHP6 518 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 CDRT15Q96T59 188 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 GLI3P10071 1580 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 FCHO1O14526 889 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 TSNQ15631 228 aaKnown RBP10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 SULT1C3Q6IMI6 304 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 CPNE9Q8IYJ1 553 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 TMEM145Q8NBT3 493 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 APOLD1Q96LR9 279 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 SMOQ99835 787 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 PAAF1Q9BRP4 392 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 CCM2Q9BSQ5 444 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 CAB39Q9Y376 341 aaPredicted RBP10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 MYH7BA7E2Y1 1941 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 PIRO00625 290 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 MAN1A2O60476 641 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 NQO1P15559 274 aaKnown RBP10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 GSTM5P46439 218 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 RUNX3Q13761 415 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 CHRNA6Q15825 494 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 SIRPB2Q5JXA9 342 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 SAMD4BQ5PRF9 694 aaKnown RBP10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 PIWIL4Q7Z3Z4 852 aaKnown RBP10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 PNPT1Q8TCS8 783 aaKnown RBP10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 AZIN2Q96A70 460 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 MECRQ9BV79 373 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 ELL3Q9HB65 397 aaPredicted RBP10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 FTSJ1Q9UET6 329 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 SERTAD3Q9UJW9 196 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 EPCAMP16422 314 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 RAPSNQ13702 412 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 PEX5LQ8IYB4 626 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 RELTQ969Z4 430 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 MFSD3Q96ES6 412 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 EBPLQ9BY08 206 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 TPSD1Q9BZJ3 242 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 ZDHHC3Q9NYG2 299 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 KCNK4Q9NYG8 393 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 DMTF1Q9Y222 760 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 C2orf78A6NCI8 922 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 GRXCR1A8MXD5 290 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 PLGP00747 810 aaPredicted RBP10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 GRIA2P42262 883 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 HSPB3Q12988 150 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 LRRC66Q68CR7 880 aa10.58□□□□□ -0.72
SYNPO2-201ENST00000307142 ZMAT2Q96NC0 199 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms