RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 ENTPD7Q9NQZ7 604 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 DUS2Q9NX74 493 aaKnown RBP14.44□□□□□ -0.1
PTPN9-201ENST00000306726 PLK2Q9NYY3 685 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 POLG2Q9UHN1 485 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 TRMT6Q9UJA5 497 aaKnown RBP14.44□□□□□ -0.1
PTPN9-201ENST00000306726 E9PAM4 449 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 MITFO75030 526 aaPredicted RBP14.44□□□□□ -0.1
PTPN9-201ENST00000306726 CYP27C1Q4G0S4 372 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 CCDC103Q8IW40 242 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 ATG16L2Q8NAA4 619 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 FRS2Q8WU20 508 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 FEM1CQ96JP0 617 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 MRGPRX2Q96LB1 330 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 ADGRE2Q9UHX3 823 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 SMIM30A4D0T7 59 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 ARNTP27540 789 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 CD52P31358 61 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 CTBSQ01459 385 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 PAFAH1B3Q15102 231 aaKnown RBP14.44□□□□□ -0.1
PTPN9-201ENST00000306726 ZBED5Q49AG3 693 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 PTRHD1Q6GMV3 140 aaKnown RBP14.44□□□□□ -0.1
PTPN9-201ENST00000306726 TMEM207Q6UWW9 146 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 DET1Q7L5Y6 550 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 SZRD1Q7Z422 152 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 HMGCLL1Q8TB92 370 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 C1QTNF1Q9BXJ1 281 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 USP3Q9Y6I4 520 aa14.44□□□□□ -0.1
PTPN9-201ENST00000306726 PABPN1LA6NDY0 278 aaKnown RBP14.43□□□□□ -0.1
PTPN9-201ENST00000306726 INMTO95050 263 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 F9P00740 461 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 CAPN1P07384 714 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 ALOX12P18054 663 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 PCSK1P29120 753 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 HSPA7P48741 367 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 HTR6P50406 440 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 SELPLGQ14242 412 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 CCDC85BQ15834 202 aaPredicted RBP14.43□□□□□ -0.1
PTPN9-201ENST00000306726 TECRLQ5HYJ1 363 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 GDF6Q6KF10 455 aaPredicted RBP14.43□□□□□ -0.1
PTPN9-201ENST00000306726 NECAB2Q7Z6G3 386 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 CRYBG2Q8N1P7 616 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 SFRP1Q8N474 314 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 FAM86B1Q8N7N1 296 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 LINGO1Q96FE5 620 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 C11orf49Q9H6J7 331 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 RMI1Q9H9A7 625 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 IGSF5Q9NSI5 407 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 RAMP2O60895 175 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 B3GALT4O96024 378 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 SLC6A2P23975 617 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 FAM117BQ6P1L5 589 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 GLT6D1Q7Z4J2 308 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 GPR180Q86V85 440 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 C8orf59Q8N0T1 100 aaPredicted RBP14.43□□□□□ -0.1
PTPN9-201ENST00000306726 CLIP4Q8N3C7 705 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 TNIP2Q8NFZ5 429 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 OR52J3Q8NH60 311 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 RSPH1Q8WYR4 309 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 FAM193BQ96PV7 902 aaPredicted RBP14.43□□□□□ -0.1
PTPN9-201ENST00000306726 MAP10Q9P2G4 905 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 A0A087X1B8 175 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 STX7O15400 261 aaKnown RBP14.43□□□□□ -0.1
PTPN9-201ENST00000306726 MFN2O95140 757 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 C1RP00736 705 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 FUCA1P04066 466 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 POU2F1P14859 743 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 PNPLA4P41247 253 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 IDH2P48735 452 aaKnown RBP14.43□□□□□ -0.1
PTPN9-201ENST00000306726 TRPC1P48995 793 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 PRKAA2P54646 552 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 RAD51Q06609 339 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 TP53BP2Q13625 1128 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 ENPP6Q6UWR7 440 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 ANKRD33Q7Z3H0 272 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 TTC9BQ8N6N2 239 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.43□□□□□ -0.1
PTPN9-201ENST00000306726 SEPT8Q92599 483 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 PYCR2Q96C36 320 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 MCOLN1Q9GZU1 580 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 ADAMTS10Q9H324 1103 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 RPF2Q9H7B2 306 aaKnown RBP14.43□□□□□ -0.1
PTPN9-201ENST00000306726 NMUR1Q9HB89 426 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 EIF2B3Q9NR50 452 aaKnown RBP14.43□□□□□ -0.1
PTPN9-201ENST00000306726 CATSPERZQ9NTU4 200 aa14.43□□□□□ -0.1
PTPN9-201ENST00000306726 PITPNM1O00562 1244 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 MAGEA6P43360 314 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 POLR2JP52435 117 aaKnown RBP14.42□□□□□ -0.1
PTPN9-201ENST00000306726 TBX4P57082 545 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 TRIP4Q15650 581 aaPredicted RBP14.42□□□□□ -0.1
PTPN9-201ENST00000306726 EPHX4Q8IUS5 362 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 SLC22A9Q8IVM8 553 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 OR7A2PQ8NGA2 310 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 ZBTB18Q99592 522 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 NDEL1Q9GZM8 345 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 LHPPQ9H008 270 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 TOR3AQ9H497 397 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 SUCOQ9UBS9 1254 aaKnown RBP14.42□□□□□ -0.1
PTPN9-201ENST00000306726 DEAF1O75398 565 aaPredicted RBP14.42□□□□□ -0.1
PTPN9-201ENST00000306726 CYBBP04839 570 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 G6PDP11413 515 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms