RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 MSH3P20585 1137 aa14.33□□□□□ -0.12
SHCBP1-201ENST00000303383 VASPP50552 380 aaPredicted RBP14.33□□□□□ -0.12
SHCBP1-201ENST00000303383 MACC1Q6ZN28 852 aa14.33□□□□□ -0.12
SHCBP1-201ENST00000303383 HSD11B1LQ7Z5J1 315 aa14.33□□□□□ -0.12
SHCBP1-201ENST00000303383 PTCD3Q96EY7 689 aaKnown RBP14.33□□□□□ -0.12
SHCBP1-201ENST00000303383 MYADMQ96S97 322 aa14.33□□□□□ -0.12
SHCBP1-201ENST00000303383 WRAP53Q9BUR4 548 aaKnown RBP14.33□□□□□ -0.12
SHCBP1-201ENST00000303383 GJA4P35212 333 aa14.33□□□□□ -0.12
SHCBP1-201ENST00000303383 GALNT1Q10472 559 aaPredicted RBP14.33□□□□□ -0.12
SHCBP1-201ENST00000303383 TUBB3Q13509 450 aa14.33□□□□□ -0.12
SHCBP1-201ENST00000303383 ELAVL3Q14576 367 aaKnown RBP14.33□□□□□ -0.12
SHCBP1-201ENST00000303383 GPRC6AQ5T6X5 926 aa14.33□□□□□ -0.12
SHCBP1-201ENST00000303383 TMEM184AQ6ZMB5 413 aa14.33□□□□□ -0.12
SHCBP1-201ENST00000303383 PARS2Q7L3T8 475 aaKnown RBP14.33□□□□□ -0.12
SHCBP1-201ENST00000303383 CEP70Q8NHQ1 597 aa14.33□□□□□ -0.12
SHCBP1-201ENST00000303383 KCTD5Q9NXV2 234 aa14.33□□□□□ -0.12
SHCBP1-201ENST00000303383 CCDC189A1A4V9 331 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 LRRC14BA6NHZ5 514 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 APODP05090 189 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 MTHFD2P13995 350 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 FCARP24071 287 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 CA5AP35218 305 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 CLCQ05315 142 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 CLEC6AQ6EIG7 209 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 POU5F2Q8N7G0 328 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 HCAR2Q8TDS4 363 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 ATP6V1E2Q96A05 226 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 CCDC28BQ9BUN5 200 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 RIOK2Q9BVS4 552 aaKnown RBP14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 TRMT61BQ9BVS5 477 aaKnown RBP14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 LOC100653049A0A140TA62 436 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 C1QTNF3-AMACRE9PGA6 284 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 KRT34O76011 436 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 KAT7O95251 611 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 GUCA1CO95843 209 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 NAA20P61599 178 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 ELP6Q0PNE2 266 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 TGFBIQ15582 683 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 DPPA4Q7L190 304 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 CLYBLQ8N0X4 340 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 LKAAEAR1Q8TD35 194 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 CATSPER2Q96P56 530 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 ZSCAN5AQ9BUG6 496 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 ZDHHC4Q9NPG8 344 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 NUDT4Q9NZJ9 180 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 IKZF3Q9UKT9 509 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 LAMA3Q16787 3333 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 CAPN14A8MX76 684 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 RASSF9O75901 435 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 TSPAN12O95859 305 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 AOC1P19801 751 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 COPAP53621 1224 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 FCHO2Q0JRZ9 810 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 HSPA14Q0VDF9 509 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 BOP1Q14137 746 aaKnown RBP14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 SUGP1Q8IWZ8 645 aaKnown RBP14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 PARP9Q8IXQ6 854 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 DDIASQ8IXT1 998 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 AP2M1Q96CW1 435 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 FAM8A1Q9UBU6 413 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 SUN2Q9UH99 717 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 ANGPTL3Q9Y5C1 460 aa14.32□□□□□ -0.12
SHCBP1-201ENST00000303383 PIKFYVEQ9Y2I7 2098 aa14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 LZTS3O60299 673 aaPredicted RBP14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 MTX2O75431 263 aa14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 PAPLNO95428 1278 aa14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 CHEK2O96017 543 aa14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 ATP1B2P14415 290 aaPredicted RBP14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 LCP2Q13094 533 aa14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 GRIN2CQ14957 1233 aa14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 ITPRIPL2Q3MIP1 535 aa14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 ACSBG2Q5FVE4 666 aa14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 RINLQ6ZS11 566 aa14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 TMPRSS6Q8IU80 811 aa14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 TDHQ8IZJ6 230 aa14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 VOPP1Q96AW1 172 aa14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 PDLIM5Q96HC4 596 aaKnown RBP14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 NSUN5Q96P11 429 aaKnown RBP14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 HGH1Q9BTY7 390 aa14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 PLA2G2FQ9BZM2 168 aa14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 ITM2BQ9Y287 266 aa14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 TSPAN11A1L157 253 aa14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 STX16-NPEPL1H3BU86 382 aa14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 STX16O14662 325 aa14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 LAMP2P13473 410 aa14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 NAIF1Q69YI7 327 aaPredicted RBP14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 PARM1Q6UWI2 310 aa14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 MMAAQ8IVH4 418 aaKnown RBP14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 CHPFQ8IZ52 775 aa14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 ESAMQ96AP7 390 aa14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 SARDHQ9UL12 918 aa14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 WNT9AO14904 365 aa14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 AZIN1O14977 448 aa14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 BTKQ06187 659 aa14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 C9orf64Q5T6V5 341 aa14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 TRAM1L1Q8N609 369 aa14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 TMIEQ8NEW7 156 aa14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 OR56A4Q8NGH8 313 aa14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 CACNA2D2Q9NY47 1150 aa14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 TAS2R1Q9NYW7 299 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms