RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 EPN2O95208 641 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 IVLP07476 585 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 PKMP14618 531 aaKnown RBP9.35□□□□□ -0.91
RFX3-201ENST00000302303 ZNF7P17097 686 aaPredicted RBP9.35□□□□□ -0.91
RFX3-201ENST00000302303 CD9P21926 228 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 PMLP29590 882 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 CCR7P32248 378 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 GMPRP36959 345 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 CTSKP43235 329 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 CD151P48509 253 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 PRLHRP49683 370 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 CLCN7P51798 805 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 TAS2R39P59534 338 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 GBX1Q14549 363 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 KIF19Q2TAC6 998 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 KLHL38Q2WGJ6 581 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 AARS2Q5JTZ9 985 aaKnown RBP9.35□□□□□ -0.91
RFX3-201ENST00000302303 PRAMEF14Q5SWL7 426 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 DOK6Q6PKX4 331 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 TMEM220Q6QAJ8 160 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 ENPP7Q6UWV6 458 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 NRROSQ86YC3 692 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 DCLK2Q8N568 766 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 CCL4L1Q8NHW4 92 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 GDAP1Q8TB36 358 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 PIGKQ92643 395 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 CDKL2Q92772 493 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 ISL2Q96A47 359 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 LOXL4Q96JB6 756 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 WDR92Q96MX6 357 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 CAB39LQ9H9S4 337 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 SLC24A2Q9UI40 661 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 SUFUQ9UMX1 484 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 GPR34Q9UPC5 381 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 ANKRD6Q9Y2G4 727 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 DGKBQ9Y6T7 804 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 PCDH15Q96QU1 1955 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 KNL1Q8NG31 2342 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 UBA6A0AVT1 1052 aaPredicted RBP9.34□□□□□ -0.91
RFX3-201ENST00000302303 GPR89AB7ZAQ6 455 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 CACNB4O00305 520 aaPredicted RBP9.34□□□□□ -0.91
RFX3-201ENST00000302303 SCAMP1O15126 338 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 GRID2O43424 1007 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 RFPL1O75677 317 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 POP7O75817 140 aaKnown RBP9.34□□□□□ -0.91
RFX3-201ENST00000302303 AP2A2O94973 939 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 ESR1P03372 595 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 ALDOAP04075 364 aaKnown RBP9.34□□□□□ -0.91
RFX3-201ENST00000302303 ITGA2BP08514 1039 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 GPR89BP0CG08 455 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 GIMD1P0DJR0 217 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 MSH3P20585 1137 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 FDXRP22570 491 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 HOXD12P35452 270 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 NBL1P41271 181 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 MSH2P43246 934 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 MAGEA12P43365 314 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 SLCO1A2P46721 670 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 AFF3P51826 1226 aaKnown RBP9.34□□□□□ -0.91
RFX3-201ENST00000302303 EIF3BP55884 814 aaKnown RBP9.34□□□□□ -0.91
RFX3-201ENST00000302303 SRP54P61011 504 aaKnown RBP9.34□□□□□ -0.91
RFX3-201ENST00000302303 BMPR2Q13873 1038 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 ZKSCAN8Q15776 578 aaPredicted RBP9.34□□□□□ -0.91
RFX3-201ENST00000302303 ZNF542PQ5EBM4 170 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 RNF187Q5TA31 235 aaPredicted RBP9.34□□□□□ -0.91
RFX3-201ENST00000302303 HECTD2Q5U5R9 776 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 SLC23A3Q6PIS1 610 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 NAPRTQ6XQN6 538 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 PRR23BQ6ZRT6 265 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 FAM83HQ6ZRV2 1179 aaPredicted RBP9.34□□□□□ -0.91
RFX3-201ENST00000302303 PIM3Q86V86 326 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 DCP2Q8IU60 420 aaKnown RBP9.34□□□□□ -0.91
RFX3-201ENST00000302303 OTUD6BQ8N6M0 293 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 HEXDCQ8WVB3 486 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.34□□□□□ -0.91
RFX3-201ENST00000302303 ATXN7L3BQ96GX2 97 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 PRRX2Q99811 253 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 ROPN1BQ9BZX4 212 aaPredicted RBP9.34□□□□□ -0.91
RFX3-201ENST00000302303 CLPBQ9H078 707 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 SMOC1Q9H4F8 434 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 ROPN1Q9HAT0 212 aaPredicted RBP9.34□□□□□ -0.91
RFX3-201ENST00000302303 FAM86C1Q9NVL1 165 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 NSMCE4AQ9NXX6 385 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 LGALS13Q9UHV8 139 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 VWA7Q9Y334 891 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 PCDHB1Q9Y5F3 818 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 SNX11Q9Y5W9 270 aa9.34□□□□□ -0.91
RFX3-201ENST00000302303 FAM95CA0A1B0GW59 222 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 A0A1W2PPM1 405 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 SLC5A10A0PJK1 596 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 GPC4O75487 556 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 ASMTLO95671 621 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 TSPAN12O95859 305 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 CSF2P04141 144 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 CELA2BP08218 269 aaPredicted RBP9.33□□□□□ -0.92
RFX3-201ENST00000302303 TGM1P22735 817 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 AOAHP28039 575 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 AKT1P31749 480 aa9.33□□□□□ -0.92
RFX3-201ENST00000302303 SPRP35270 261 aaPredicted RBP9.33□□□□□ -0.92
RFX3-201ENST00000302303 HK3P52790 923 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms