RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 CYP4V2Q6ZWL3 525 aaPredicted RBP13.17□□□□□ -0.3
CASC4-201ENST00000299957 RNF180Q86T96 592 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 ZC3H7AQ8IWR0 971 aaKnown RBP13.17□□□□□ -0.3
CASC4-201ENST00000299957 SLC15A3Q8IY34 581 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 NTAN1Q96AB6 310 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 BTN2A3PQ96KV6 586 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 REEP1Q9H902 201 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 POLE4Q9NR33 117 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 SLAMF8Q9P0V8 285 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 DUSP12Q9UNI6 340 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 ANKRD36CQ5JPF3 1778 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 PRMT5O14744 637 aaPredicted RBP13.17□□□□□ -0.3
CASC4-201ENST00000299957 TACR2P21452 398 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 PCSK6P29122 969 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 GRIA2P42262 883 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 PRKAG1P54619 331 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 ZNF280BQ86YH2 543 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 SNX29P2Q8IUI4 249 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 EGFL6Q8IUX8 553 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 SMG8Q8ND04 991 aaKnown RBP13.17□□□□□ -0.3
CASC4-201ENST00000299957 OR52B6Q8NGF0 335 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 RTP4Q96DX8 246 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 ZHX1-C8orf76Q96EF9 292 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 ACBD6Q9BR61 282 aa13.17□□□□□ -0.3
CASC4-201ENST00000299957 OR2AG2A6NM03 316 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 PRAMEF1O95521 474 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 RHOQP17081 205 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 OXTRP30559 389 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 VARS2Q5ST30 1063 aaKnown RBP13.16□□□□□ -0.3
CASC4-201ENST00000299957 GPR153Q6NV75 609 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 TTC23LQ6PF05 361 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 KIAA0408Q6ZU52 694 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 THAP5Q7Z6K1 395 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 ZNF554Q86TJ5 538 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 GPR180Q86V85 440 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 LIX1Q8N485 282 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 C7orf57Q8NEG2 295 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 SH3GL1Q99961 368 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 VRTNQ9H8Y1 702 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 CACYBPQ9HB71 228 aaKnown RBP13.16□□□□□ -0.3
CASC4-201ENST00000299957 TRPC4Q9UBN4 977 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 C7orf72A4D263 438 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 SLC7A4O43246 635 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 XYLBO75191 536 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 CORO1AP31146 461 aaKnown RBP13.16□□□□□ -0.3
CASC4-201ENST00000299957 ALDH6A1Q02252 535 aaKnown RBP13.16□□□□□ -0.3
CASC4-201ENST00000299957 RUNX1T1Q06455 604 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 CCDC92Q53HC0 331 aaPredicted RBP13.16□□□□□ -0.3
CASC4-201ENST00000299957 OGFRL1Q5TC84 451 aaPredicted RBP13.16□□□□□ -0.3
CASC4-201ENST00000299957 STEAP4Q687X5 459 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 UGT2A3Q6UWM9 527 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 CLIP4Q8N3C7 705 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 TMEM132CQ8N3T6 1108 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 GTF3C2Q8WUA4 911 aaPredicted RBP13.16□□□□□ -0.3
CASC4-201ENST00000299957 NACC2Q96BF6 587 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 POLR3BQ9NW08 1133 aaPredicted RBP13.16□□□□□ -0.3
CASC4-201ENST00000299957 PADI4Q9UM07 663 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 DOCK2Q92608 1830 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 TSC22D2O75157 780 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 ALDH1A2O94788 518 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 ANGPTL1O95841 491 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 CAPN3P20807 821 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 RPL9P32969 192 aaKnown RBP13.16□□□□□ -0.3
CASC4-201ENST00000299957 CAPGP40121 348 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 NUDT6P53370 316 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 CBX3Q13185 183 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 DNASE1L3Q13609 305 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 ZC3H12BQ5HYM0 836 aaKnown RBP13.16□□□□□ -0.3
CASC4-201ENST00000299957 TYW3Q6IPR3 259 aaKnown RBP13.16□□□□□ -0.3
CASC4-201ENST00000299957 GDF6Q6KF10 455 aaPredicted RBP13.16□□□□□ -0.3
CASC4-201ENST00000299957 TRMT11Q7Z4G4 463 aaKnown RBP13.16□□□□□ -0.3
CASC4-201ENST00000299957 ZMIZ2Q8NF64 920 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 IGSF8Q969P0 613 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 BIRC7Q96CA5 298 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 ASB2Q96Q27 587 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 WDR6Q9NNW5 1121 aaKnown RBP13.16□□□□□ -0.3
CASC4-201ENST00000299957 HMG20AQ9NP66 347 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 ADAMTS5Q9UNA0 930 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 GIT1Q9Y2X7 761 aa13.16□□□□□ -0.3
CASC4-201ENST00000299957 NME4O00746 187 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 OPN1SWP03999 348 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 JAK1P23458 1154 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 GRK3P35626 688 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 CYP27C1Q4G0S4 372 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 TJAP1Q5JTD0 557 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 HECTD3Q5T447 861 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 DOK6Q6PKX4 331 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 OR9Q1Q8NGQ5 310 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 FOPNLQ96NB1 174 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 GDAP2Q9NXN4 497 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 PDP1Q9P0J1 537 aaPredicted RBP13.15□□□□□ -0.3
CASC4-201ENST00000299957 MAP10Q9P2G4 905 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 RAPGEFL1Q9UHV5 662 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 TBC1D30Q9Y2I9 924 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 NME7Q9Y5B8 376 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 MAFKO60675 156 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 KRT75O95678 551 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 OTCP00480 354 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 GATMP50440 423 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 UNC50Q53HI1 259 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms