RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 DTNBP1Q96EV8 351 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 NUSAP1Q9BXS6 441 aaKnown RBP13.47□□□□□ -0.25
BCCIP-202ENST00000299130 EBF1Q9UH73 591 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 TRMT6Q9UJA5 497 aaKnown RBP13.47□□□□□ -0.25
BCCIP-202ENST00000299130 TMX2-CTNND1H3BSU7 103 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 TBC1D4O60343 1298 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 SNAP91O60641 907 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 RSL1D1O76021 490 aaKnown RBP13.47□□□□□ -0.25
BCCIP-202ENST00000299130 MLYCDO95822 493 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 PYGLP06737 847 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 RPL17P18621 184 aaKnown RBP13.47□□□□□ -0.25
BCCIP-202ENST00000299130 PSMA3P25788 255 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 ATP5C1P36542 298 aaKnown RBP13.47□□□□□ -0.25
BCCIP-202ENST00000299130 IL2P60568 153 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 ERVK-8P63133 956 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 TUBA4AP68366 448 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 HPCAP84074 193 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 TGFBIQ15582 683 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 TAS2R42Q7RTR8 314 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 SAPCD2Q86UD0 394 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 BCL7CQ8WUZ0 217 aaPredicted RBP13.47□□□□□ -0.25
BCCIP-202ENST00000299130 GAB3Q8WWW8 586 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 EID2BQ96D98 161 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 C9orf16Q9BUW7 83 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.47□□□□□ -0.25
BCCIP-202ENST00000299130 LEF1Q9UJU2 399 aaPredicted RBP13.47□□□□□ -0.25
BCCIP-202ENST00000299130 DNMT3LQ9UJW3 386 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 PHF24Q9UPV7 400 aa13.47□□□□□ -0.25
BCCIP-202ENST00000299130 ANKRD66B4E2M5 251 aa13.46□□□□□ -0.25
BCCIP-202ENST00000299130 SNAP29O95721 258 aa13.46□□□□□ -0.25
BCCIP-202ENST00000299130 GPIP06744 558 aa13.46□□□□□ -0.25
BCCIP-202ENST00000299130 RHOCP08134 193 aa13.46□□□□□ -0.25
BCCIP-202ENST00000299130 VARSP26640 1264 aaKnown RBP13.46□□□□□ -0.25
BCCIP-202ENST00000299130 ARF5P84085 180 aa13.46□□□□□ -0.25
BCCIP-202ENST00000299130 ILF2Q12905 390 aaKnown RBP13.46□□□□□ -0.25
BCCIP-202ENST00000299130 PDCD4Q53EL6 469 aaKnown RBP13.46□□□□□ -0.25
BCCIP-202ENST00000299130 FUT10Q6P4F1 479 aa13.46□□□□□ -0.25
BCCIP-202ENST00000299130 TTC30BQ8N4P2 665 aa13.46□□□□□ -0.25
BCCIP-202ENST00000299130 MAGEE2Q8TD90 523 aaPredicted RBP13.46□□□□□ -0.25
BCCIP-202ENST00000299130 TSPEARQ8WU66 669 aa13.46□□□□□ -0.25
BCCIP-202ENST00000299130 CASD1Q96PB1 797 aa13.46□□□□□ -0.25
BCCIP-202ENST00000299130 NACA2Q9H009 215 aa13.46□□□□□ -0.25
BCCIP-202ENST00000299130 ACTL8Q9H568 366 aa13.46□□□□□ -0.25
BCCIP-202ENST00000299130 EVLQ9UI08 416 aaPredicted RBP13.46□□□□□ -0.25
BCCIP-202ENST00000299130 hCG_2014768A0A024R1R8 64 aa13.46□□□□□ -0.26
BCCIP-202ENST00000299130 COCHO43405 550 aa13.46□□□□□ -0.26
BCCIP-202ENST00000299130 KATNA1O75449 491 aa13.46□□□□□ -0.26
BCCIP-202ENST00000299130 CHEK2O96017 543 aa13.46□□□□□ -0.26
BCCIP-202ENST00000299130 CAPN1P07384 714 aa13.46□□□□□ -0.26
BCCIP-202ENST00000299130 CNPP09543 421 aaKnown RBP13.46□□□□□ -0.26
BCCIP-202ENST00000299130 IRF1P10914 325 aa13.46□□□□□ -0.26
BCCIP-202ENST00000299130 G6PDP11413 515 aa13.46□□□□□ -0.26
BCCIP-202ENST00000299130 CST5P28325 142 aaPredicted RBP13.46□□□□□ -0.26
BCCIP-202ENST00000299130 ARL1P40616 181 aaPredicted RBP13.46□□□□□ -0.26
BCCIP-202ENST00000299130 MRPL19P49406 292 aaKnown RBP13.46□□□□□ -0.26
BCCIP-202ENST00000299130 CLCN7P51798 805 aa13.46□□□□□ -0.26
BCCIP-202ENST00000299130 DGKQP52824 942 aa13.46□□□□□ -0.26
BCCIP-202ENST00000299130 KCTD21Q4G0X4 260 aa13.46□□□□□ -0.26
BCCIP-202ENST00000299130 CYBRD1Q53TN4 286 aa13.46□□□□□ -0.26
BCCIP-202ENST00000299130 RNF219Q5W0B1 726 aaPredicted RBP13.46□□□□□ -0.26
BCCIP-202ENST00000299130 TXNDC11Q6PKC3 985 aa13.46□□□□□ -0.26
BCCIP-202ENST00000299130 ERI1Q8IV48 349 aaKnown RBP13.46□□□□□ -0.26
BCCIP-202ENST00000299130 ALDH16A1Q8IZ83 802 aa13.46□□□□□ -0.26
BCCIP-202ENST00000299130 ISG20Q96AZ6 181 aaKnown RBP13.46□□□□□ -0.26
BCCIP-202ENST00000299130 PPM1MQ96MI6 270 aa13.46□□□□□ -0.26
BCCIP-202ENST00000299130 ANAPC2Q9UJX6 822 aa13.46□□□□□ -0.26
BCCIP-202ENST00000299130 CDC14AQ9UNH5 594 aa13.46□□□□□ -0.26
BCCIP-202ENST00000299130 FAM234BA2RU67 622 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 TRIM64CA6NLI5 447 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 STX7O15400 261 aaKnown RBP13.45□□□□□ -0.26
BCCIP-202ENST00000299130 SLC10A3P09131 477 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 ITGB6P18564 788 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 CORO1AP31146 461 aaKnown RBP13.45□□□□□ -0.26
BCCIP-202ENST00000299130 YAP1P46937 504 aaKnown RBP13.45□□□□□ -0.26
BCCIP-202ENST00000299130 SLC11A2P49281 568 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 EMP3P54852 163 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 EEFSECP57772 596 aaKnown RBP13.45□□□□□ -0.26
BCCIP-202ENST00000299130 MTPNP58546 118 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 EMX2Q04743 252 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 PLCL1Q15111 1095 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 TMTC4Q5T4D3 741 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 IL27RAQ6UWB1 636 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 DLEU7Q6UYE1 221 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 CHST15Q7LFX5 561 aaPredicted RBP13.45□□□□□ -0.26
BCCIP-202ENST00000299130 ZFAND4Q86XD8 727 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 CLVS1Q8IUQ0 354 aaPredicted RBP13.45□□□□□ -0.26
BCCIP-202ENST00000299130 GOLM1Q8NBJ4 401 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 PCSK9Q8NBP7 692 aaKnown RBP13.45□□□□□ -0.26
BCCIP-202ENST00000299130 PAPD5Q8NDF8 572 aaKnown RBP13.45□□□□□ -0.26
BCCIP-202ENST00000299130 VPS50Q96JG6 964 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 PREBQ9HCU5 417 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 TMEM161AQ9NX61 479 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 THEGQ9P2T0 379 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 TMCO1Q9UM00 188 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 FADS3Q9Y5Q0 445 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 ST14Q9Y5Y6 855 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 PLXNA4Q9HCM2 1894 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 E5RI56 91 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 H0Y858 1186 aa13.45□□□□□ -0.26
BCCIP-202ENST00000299130 OR7A17O14581 309 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms