RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 SFTPCP11686 197 aa20.87■□□□□ 0.93
SMCO4-201ENST00000298966 PAMP19021 973 aa20.87■□□□□ 0.93
SMCO4-201ENST00000298966 SLC5A2P31639 672 aa20.87■□□□□ 0.93
SMCO4-201ENST00000298966 INHBCP55103 352 aa20.87■□□□□ 0.93
SMCO4-201ENST00000298966 SGCGQ13326 291 aa20.87■□□□□ 0.93
SMCO4-201ENST00000298966 EIF3IQ13347 325 aaKnown RBP20.87■□□□□ 0.93
SMCO4-201ENST00000298966 HP1BP3Q5SSJ5 553 aaPredicted RBP20.87■□□□□ 0.93
SMCO4-201ENST00000298966 ZNF574Q6ZN55 896 aaPredicted RBP20.87■□□□□ 0.93
SMCO4-201ENST00000298966 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.87■□□□□ 0.93
SMCO4-201ENST00000298966 GABPB2Q8TAK5 448 aaPredicted RBP20.87■□□□□ 0.93
SMCO4-201ENST00000298966 FBF1Q8TES7 1133 aa20.87■□□□□ 0.93
SMCO4-201ENST00000298966 EXTL1Q92935 676 aa20.87■□□□□ 0.93
SMCO4-201ENST00000298966 CFAP36Q96G28 342 aa20.87■□□□□ 0.93
SMCO4-201ENST00000298966 TRIB3Q96RU7 358 aa20.87■□□□□ 0.93
SMCO4-201ENST00000298966 CPEB1Q9BZB8 566 aaKnown RBP20.87■□□□□ 0.93
SMCO4-201ENST00000298966 TNKS2Q9H2K2 1166 aa20.87■□□□□ 0.93
SMCO4-201ENST00000298966 ATP13A3Q9H7F0 1226 aa20.87■□□□□ 0.93
SMCO4-201ENST00000298966 HACD3Q9P035 362 aa20.87■□□□□ 0.93
SMCO4-201ENST00000298966 APOBEC3BQ9UH17 382 aaKnown RBP20.87■□□□□ 0.93
SMCO4-201ENST00000298966 LGALS13Q9UHV8 139 aa20.87■□□□□ 0.93
SMCO4-201ENST00000298966 RABGEF1Q9UJ41 708 aa20.87■□□□□ 0.93
SMCO4-201ENST00000298966 FADS3Q9Y5Q0 445 aa20.87■□□□□ 0.93
SMCO4-201ENST00000298966 ACTL7AQ9Y615 435 aa20.87■□□□□ 0.93
SMCO4-201ENST00000298966 FLNCQ14315 2725 aa20.87■□□□□ 0.93
SMCO4-201ENST00000298966 TCRBV9S1A1TA0A576 114 aa20.86■□□□□ 0.93
SMCO4-201ENST00000298966 PLD2O14939 933 aa20.86■□□□□ 0.93
SMCO4-201ENST00000298966 ANXA6P08133 673 aa20.86■□□□□ 0.93
SMCO4-201ENST00000298966 ADRB3P13945 408 aa20.86■□□□□ 0.93
SMCO4-201ENST00000298966 RGRP47804 291 aa20.86■□□□□ 0.93
SMCO4-201ENST00000298966 PDX1P52945 283 aa20.86■□□□□ 0.93
SMCO4-201ENST00000298966 EIF2B5Q13144 721 aaKnown RBP20.86■□□□□ 0.93
SMCO4-201ENST00000298966 CRYMQ14894 314 aa20.86■□□□□ 0.93
SMCO4-201ENST00000298966 ESRP1Q6NXG1 681 aaKnown RBP20.86■□□□□ 0.93
SMCO4-201ENST00000298966 DPY19L3Q6ZPD9 716 aa20.86■□□□□ 0.93
SMCO4-201ENST00000298966 RBFAQ8N0V3 343 aa20.86■□□□□ 0.93
SMCO4-201ENST00000298966 MPP5Q8N3R9 675 aa20.86■□□□□ 0.93
SMCO4-201ENST00000298966 FBXO39Q8N4B4 442 aa20.86■□□□□ 0.93
SMCO4-201ENST00000298966 EPS8L3Q8TE67 593 aaKnown RBP20.86■□□□□ 0.93
SMCO4-201ENST00000298966 ZBTB9Q96C00 473 aa20.86■□□□□ 0.93
SMCO4-201ENST00000298966 TLCD1Q96CP7 247 aa20.86■□□□□ 0.93
SMCO4-201ENST00000298966 LENG8Q96PV6 779 aaPredicted RBP20.86■□□□□ 0.93
SMCO4-201ENST00000298966 C19orf43Q9BQ61 176 aa20.86■□□□□ 0.93
SMCO4-201ENST00000298966 APOL2Q9BQE5 337 aa20.86■□□□□ 0.93
SMCO4-201ENST00000298966 MOCS1Q9NZB8 636 aa20.86■□□□□ 0.93
SMCO4-201ENST00000298966 TCAF1Q9Y4C2 921 aa20.86■□□□□ 0.93
SMCO4-201ENST00000298966 RPS6KL1Q9Y6S9 549 aa20.86■□□□□ 0.93
SMCO4-201ENST00000298966 FAM169AQ9Y6X4 670 aa20.86■□□□□ 0.93
SMCO4-201ENST00000298966 COL12A1Q99715 3063 aa20.85■□□□□ 0.93
SMCO4-201ENST00000298966 TMX2-CTNND1H3BSU7 103 aa20.85■□□□□ 0.93
SMCO4-201ENST00000298966 RGS16O15492 202 aaPredicted RBP20.85■□□□□ 0.93
SMCO4-201ENST00000298966 SPINT1O43278 529 aa20.85■□□□□ 0.93
SMCO4-201ENST00000298966 SUV39H1O43463 412 aa20.85■□□□□ 0.93
SMCO4-201ENST00000298966 POP4O95707 220 aaKnown RBP20.85■□□□□ 0.93
SMCO4-201ENST00000298966 NTRK1P04629 796 aa20.85■□□□□ 0.93
SMCO4-201ENST00000298966 ITGB7P26010 798 aa20.85■□□□□ 0.93
SMCO4-201ENST00000298966 SERPINA4P29622 427 aa20.85■□□□□ 0.93
SMCO4-201ENST00000298966 THOP1P52888 689 aa20.85■□□□□ 0.93
SMCO4-201ENST00000298966 PDE1BQ01064 536 aa20.85■□□□□ 0.93
SMCO4-201ENST00000298966 BCL2L1Q07817 233 aa20.85■□□□□ 0.93
SMCO4-201ENST00000298966 ILF2Q12905 390 aaKnown RBP20.85■□□□□ 0.93
SMCO4-201ENST00000298966 C1orf61Q13536 156 aa20.85■□□□□ 0.93
SMCO4-201ENST00000298966 PTK2BQ14289 1009 aa20.85■□□□□ 0.93
SMCO4-201ENST00000298966 CARD16Q5EG05 197 aa20.85■□□□□ 0.93
SMCO4-201ENST00000298966 PRRT3Q5FWE3 981 aa20.85■□□□□ 0.93
SMCO4-201ENST00000298966 TNFAIP8L3Q5GJ75 292 aa20.85■□□□□ 0.93
SMCO4-201ENST00000298966 SIRPB2Q5JXA9 342 aa20.85■□□□□ 0.93
SMCO4-201ENST00000298966 TPRG1LQ5T0D9 272 aa20.85■□□□□ 0.93
SMCO4-201ENST00000298966 CERCAMQ5T4B2 595 aa20.85■□□□□ 0.93
SMCO4-201ENST00000298966 RAB11FIP2Q7L804 512 aa20.85■□□□□ 0.93
SMCO4-201ENST00000298966 NDUFAF2Q8N183 169 aa20.85■□□□□ 0.93
SMCO4-201ENST00000298966 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.85■□□□□ 0.93
SMCO4-201ENST00000298966 EXOC2Q96KP1 924 aa20.85■□□□□ 0.93
SMCO4-201ENST00000298966 ZNF641Q96N77 438 aaPredicted RBP20.85■□□□□ 0.93
SMCO4-201ENST00000298966 STRADBQ9C0K7 418 aa20.85■□□□□ 0.93
SMCO4-201ENST00000298966 NSMCE4AQ9NXX6 385 aa20.85■□□□□ 0.93
SMCO4-201ENST00000298966 VPS18Q9P253 973 aa20.85■□□□□ 0.93
SMCO4-201ENST00000298966 PADI4Q9UM07 663 aa20.85■□□□□ 0.93
SMCO4-201ENST00000298966 IKBKGQ9Y6K9 419 aa20.85■□□□□ 0.93
SMCO4-201ENST00000298966 WASF2Q9Y6W5 498 aa20.85■□□□□ 0.93
SMCO4-201ENST00000298966 LMO7DNF2Z398 122 aa20.84■□□□□ 0.93
SMCO4-201ENST00000298966 AP1G1O43747 822 aa20.84■□□□□ 0.93
SMCO4-201ENST00000298966 ITGB6P18564 788 aa20.84■□□□□ 0.93
SMCO4-201ENST00000298966 NFKBIAP25963 317 aa20.84■□□□□ 0.93
SMCO4-201ENST00000298966 UGT1A5P35504 534 aa20.84■□□□□ 0.93
SMCO4-201ENST00000298966 PFN3P60673 137 aa20.84■□□□□ 0.93
SMCO4-201ENST00000298966 MTM1Q13496 603 aa20.84■□□□□ 0.93
SMCO4-201ENST00000298966 TGIF1Q15583 401 aa20.84■□□□□ 0.93
SMCO4-201ENST00000298966 LONRF1Q17RB8 773 aa20.84■□□□□ 0.93
SMCO4-201ENST00000298966 ANKRD20A4Q4UJ75 823 aa20.84■□□□□ 0.93
SMCO4-201ENST00000298966 ARMC12Q5T9G4 340 aa20.84■□□□□ 0.93
SMCO4-201ENST00000298966 LRRC6Q86X45 466 aa20.84■□□□□ 0.93
SMCO4-201ENST00000298966 PHACTR4Q8IZ21 702 aa20.84■□□□□ 0.93
SMCO4-201ENST00000298966 DENND6BQ8NEG7 585 aa20.84■□□□□ 0.93
SMCO4-201ENST00000298966 FAM76AQ8TAV0 307 aa20.84■□□□□ 0.93
SMCO4-201ENST00000298966 BRSK1Q8TDC3 778 aa20.84■□□□□ 0.93
SMCO4-201ENST00000298966 TBATAQ96M53 351 aa20.84■□□□□ 0.93
SMCO4-201ENST00000298966 KLF6Q99612 283 aaPredicted RBP20.84■□□□□ 0.93
SMCO4-201ENST00000298966 C1QTNF2Q9BXJ5 285 aa20.84■□□□□ 0.93
SMCO4-201ENST00000298966 CENPHQ9H3R5 247 aa20.84■□□□□ 0.93
SMCO4-201ENST00000298966 TRABDQ9H4I3 376 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms